RNA–Protein interactions for RNA: ENST00000389645.7

CAPRIN1-202, Transcript of cell cycle associated protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPRIN1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-202ENST00000389645 TRBV20-1A0A075B6N2 111 aa9.17□□□□□ -0.94
CAPRIN1-202ENST00000389645 A0A087WWL8 130 aa9.17□□□□□ -0.94
CAPRIN1-202ENST00000389645 SCGB1A1P11684 91 aa9.17□□□□□ -0.94
CAPRIN1-202ENST00000389645 CR1P17927 2039 aa9.17□□□□□ -0.94
CAPRIN1-202ENST00000389645 FN1P02751 2386 aaKnown RBP9.17□□□□□ -0.94
CAPRIN1-202ENST00000389645 DEFB112Q30KQ8 113 aa9.17□□□□□ -0.94
CAPRIN1-202ENST00000389645 FAM159AQ6UWV7 190 aa9.17□□□□□ -0.94
CAPRIN1-202ENST00000389645 SCGB3A1Q96QR1 104 aa9.17□□□□□ -0.94
CAPRIN1-202ENST00000389645 H7C2G1 150 aa9.17□□□□□ -0.94
CAPRIN1-202ENST00000389645 DPM2O94777 84 aa9.17□□□□□ -0.94
CAPRIN1-202ENST00000389645 IGHV4-59P01825 116 aa9.17□□□□□ -0.94
CAPRIN1-202ENST00000389645 CD7P09564 240 aa9.17□□□□□ -0.94
CAPRIN1-202ENST00000389645 TMEM190Q8WZ59 177 aa9.17□□□□□ -0.94
CAPRIN1-202ENST00000389645 U3KQK5 164 aa9.17□□□□□ -0.94
CAPRIN1-202ENST00000389645 TRAV12-2A0A075B6T6 113 aa9.16□□□□□ -0.94
CAPRIN1-202ENST00000389645 IGKV2D-26A0A0A0MRZ7 120 aa9.16□□□□□ -0.94
CAPRIN1-202ENST00000389645 J3QR89 54 aa9.16□□□□□ -0.94
CAPRIN1-202ENST00000389645 PSMG4Q5JS54 123 aa9.16□□□□□ -0.94
CAPRIN1-202ENST00000389645 A0A1B0GWB2 263 aa9.16□□□□□ -0.94
CAPRIN1-202ENST00000389645 Q8N8P6 123 aa9.16□□□□□ -0.94
CAPRIN1-202ENST00000389645 OR5A1Q8NGJ0 315 aa9.16□□□□□ -0.94
CAPRIN1-202ENST00000389645 SPANXB1Q9NS25 103 aaPredicted RBP9.16□□□□□ -0.94
CAPRIN1-202ENST00000389645 MRPL16Q9NX20 251 aaKnown RBP9.16□□□□□ -0.94
CAPRIN1-202ENST00000389645 IGHV4-31P0DP07 118 aa9.15□□□□□ -0.94
CAPRIN1-202ENST00000389645 FXYD2P54710 66 aa9.15□□□□□ -0.94
CAPRIN1-202ENST00000389645 RBAKDNA6NC62 111 aa9.15□□□□□ -0.94
CAPRIN1-202ENST00000389645 ATP5LO75964 103 aa9.15□□□□□ -0.94
CAPRIN1-202ENST00000389645 WFDC11Q8NEX6 87 aa9.15□□□□□ -0.94
CAPRIN1-202ENST00000389645 LINC00477Q96M19 166 aa9.15□□□□□ -0.94
CAPRIN1-202ENST00000389645 NDUFA4O00483 81 aa9.15□□□□□ -0.95
CAPRIN1-202ENST00000389645 C9orf47Q6ZRZ4 202 aa9.15□□□□□ -0.95
CAPRIN1-202ENST00000389645 DPF1Q92782 380 aa9.15□□□□□ -0.95
CAPRIN1-202ENST00000389645 PSMG3-AS1Q96PY0 264 aa9.15□□□□□ -0.95
CAPRIN1-202ENST00000389645 DAZ1Q9NQZ3 744 aaKnown RBP9.15□□□□□ -0.95
CAPRIN1-202ENST00000389645 IGHV7-4-1A0A0J9YVY3 117 aa9.14□□□□□ -0.95
CAPRIN1-202ENST00000389645 A6NDX4 124 aa9.14□□□□□ -0.95
CAPRIN1-202ENST00000389645 OVOL1O14753 267 aa9.14□□□□□ -0.95
CAPRIN1-202ENST00000389645 JPT2Q9H910 190 aa9.14□□□□□ -0.95
CAPRIN1-202ENST00000389645 ZNF256Q9Y2P7 627 aaPredicted RBP9.14□□□□□ -0.95
CAPRIN1-202ENST00000389645 GATD1Q8NB37 220 aa9.14□□□□□ -0.95
CAPRIN1-202ENST00000389645 HIST2H2BDQ6DRA6 164 aa9.14□□□□□ -0.95
CAPRIN1-202ENST00000389645 KRTAP1-3Q8IUG1 177 aa9.14□□□□□ -0.95
CAPRIN1-202ENST00000389645 SMIM13P0DJ93 91 aa9.13□□□□□ -0.95
CAPRIN1-202ENST00000389645 SYNJ2BPP57105 145 aa9.13□□□□□ -0.95
CAPRIN1-202ENST00000389645 SUMO2P61956 95 aaKnown RBP9.13□□□□□ -0.95
CAPRIN1-202ENST00000389645 BEX4Q9NWD9 120 aaPredicted RBP9.13□□□□□ -0.95
CAPRIN1-202ENST00000389645 SCGB1D4Q6XE38 83 aa9.13□□□□□ -0.95
CAPRIN1-202ENST00000389645 OR9G4Q8NGQ1 327 aa9.13□□□□□ -0.95
CAPRIN1-202ENST00000389645 PTH2Q96A98 100 aa9.13□□□□□ -0.95
CAPRIN1-202ENST00000389645 USMG5Q96IX5 58 aa9.13□□□□□ -0.95
CAPRIN1-202ENST00000389645 HIST1H4GQ99525 98 aa9.13□□□□□ -0.95
CAPRIN1-202ENST00000389645 RPL32P62910 135 aaKnown RBP9.12□□□□□ -0.95
CAPRIN1-202ENST00000389645 TCTEX1D4Q5JR98 221 aa9.12□□□□□ -0.95
CAPRIN1-202ENST00000389645 DPH3P1Q9H4G8 78 aa9.12□□□□□ -0.95
CAPRIN1-202ENST00000389645 XGP55808 180 aa9.12□□□□□ -0.95
CAPRIN1-202ENST00000389645 CHAC1Q9BUX1 264 aa9.12□□□□□ -0.95
CAPRIN1-202ENST00000389645 SMIM2Q9BVW6 85 aa9.12□□□□□ -0.95
CAPRIN1-202ENST00000389645 KLK9Q9UKQ9 250 aa9.12□□□□□ -0.95
CAPRIN1-202ENST00000389645 IGHG2P01859 326 aa9.12□□□□□ -0.95
CAPRIN1-202ENST00000389645 ZNF56Q15929 161 aa9.12□□□□□ -0.95
CAPRIN1-202ENST00000389645 ZNF575Q86XF7 245 aa9.12□□□□□ -0.95
CAPRIN1-202ENST00000389645 ZFAND2AQ8N6M9 145 aa9.12□□□□□ -0.95
CAPRIN1-202ENST00000389645 C1QTNF4Q9BXJ3 329 aa9.12□□□□□ -0.95
CAPRIN1-202ENST00000389645 PRSS29PA6NIE9 313 aa9.11□□□□□ -0.95
CAPRIN1-202ENST00000389645 TSPAN13O95857 204 aa9.11□□□□□ -0.95
CAPRIN1-202ENST00000389645 OR11H12B2RN74 326 aa9.11□□□□□ -0.95
CAPRIN1-202ENST00000389645 APOMO95445 188 aa9.11□□□□□ -0.95
CAPRIN1-202ENST00000389645 FGF6P10767 208 aa9.11□□□□□ -0.95
CAPRIN1-202ENST00000389645 SPINK13Q1W4C9 94 aa9.11□□□□□ -0.95
CAPRIN1-202ENST00000389645 OR11H1Q8NG94 326 aa9.11□□□□□ -0.95
CAPRIN1-202ENST00000389645 OR11H2Q8NH07 326 aa9.11□□□□□ -0.95
CAPRIN1-202ENST00000389645 ZNF418Q8TF45 676 aaPredicted RBP9.11□□□□□ -0.95
CAPRIN1-202ENST00000389645 AKAP9Q99996 3911 aa9.11□□□□□ -0.95
CAPRIN1-202ENST00000389645 HIVEP2P31629 2446 aa9.11□□□□□ -0.95
CAPRIN1-202ENST00000389645 COX8CQ7Z4L0 72 aa9.11□□□□□ -0.95
CAPRIN1-202ENST00000389645 C2orf66Q6UXQ4 117 aa9.1□□□□□ -0.95
CAPRIN1-202ENST00000389645 C11orf44Q8N8P7 122 aa9.1□□□□□ -0.95
CAPRIN1-202ENST00000389645 KIR2DL4Q99706 377 aa9.1□□□□□ -0.95
CAPRIN1-202ENST00000389645 CNFNQ9BYD5 112 aa9.1□□□□□ -0.95
CAPRIN1-202ENST00000389645 IGHV3-73A0A0B4J1V6 119 aa9.1□□□□□ -0.95
CAPRIN1-202ENST00000389645 LOC107984156A0A0G2JMH3 177 aa9.1□□□□□ -0.95
CAPRIN1-202ENST00000389645 GPHB5Q86YW7 130 aa9.1□□□□□ -0.95
CAPRIN1-202ENST00000389645 ARL17AQ8IVW1 177 aa9.1□□□□□ -0.95
CAPRIN1-202ENST00000389645 NRACQ8N912 160 aa9.1□□□□□ -0.95
CAPRIN1-202ENST00000389645 SPATA25Q9BR10 227 aa9.1□□□□□ -0.95
CAPRIN1-202ENST00000389645 TRBV25-1A0A075B6N4 114 aa9.1□□□□□ -0.95
CAPRIN1-202ENST00000389645 GAGE5Q13069 117 aa9.1□□□□□ -0.95
CAPRIN1-202ENST00000389645 GAGE6Q13070 117 aa9.1□□□□□ -0.95
CAPRIN1-202ENST00000389645 DUX3Q96PT4 197 aa9.1□□□□□ -0.95
CAPRIN1-202ENST00000389645 CYSLTR1Q9Y271 337 aa9.1□□□□□ -0.95
CAPRIN1-202ENST00000389645 U3KQE9 123 aa9.1□□□□□ -0.95
CAPRIN1-202ENST00000389645 CCDC179H3BU77 68 aa9.09□□□□□ -0.95
CAPRIN1-202ENST00000389645 FHL3Q13643 280 aa9.09□□□□□ -0.95
CAPRIN1-202ENST00000389645 DEFB136Q30KP8 78 aa9.09□□□□□ -0.95
CAPRIN1-202ENST00000389645 MRPL53Q96EL3 112 aaKnown RBP9.09□□□□□ -0.95
CAPRIN1-202ENST00000389645 SRSF9Q13242 221 aaKnown RBP eCLIP9.09□□□□□ -0.95
CAPRIN1-202ENST00000389645 SNRPD3P62318 126 aaKnown RBP9.08□□□□□ -0.96
CAPRIN1-202ENST00000389645 ORMDL2Q53FV1 153 aa9.08□□□□□ -0.96
CAPRIN1-202ENST00000389645 C19orf54Q5BKX5 351 aa9.08□□□□□ -0.96
CAPRIN1-202ENST00000389645 LRRC75A-AS1Q8N1F1 130 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms