RNA–Protein interactions for RNA: ENST00000384706.1

SNORD28-201, Transcript of small nucleolar RNA, C/D box 28, humanhuman

BASIC

Gene SNORD28, Length 75 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28-201ENST00000384706 NRXN2Q9P2S2 1712 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 IFT172Q9UG01 1749 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 TRAPPC8Q9Y2L5 1435 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 PAPPAQ13219 1627 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 PARP14Q460N5 1801 aa-0.82□□□□□ -2.54
SNORD28-201ENST00000384706 SMIM23A6NLE4 172 aa-0.83□□□□□ -2.54
SNORD28-201ENST00000384706 TMEM114B3SHH9 223 aa-0.83□□□□□ -2.54
SNORD28-201ENST00000384706 RPP14O95059 124 aaKnown RBP-0.83□□□□□ -2.54
SNORD28-201ENST00000384706 AKR1D1P51857 326 aa-0.83□□□□□ -2.54
SNORD28-201ENST00000384706 EDDM3BP56851 147 aa-0.83□□□□□ -2.54
SNORD28-201ENST00000384706 ARF6P62330 175 aa-0.83□□□□□ -2.54
SNORD28-201ENST00000384706 DEFB112Q30KQ8 113 aa-0.83□□□□□ -2.54
SNORD28-201ENST00000384706 CFAP126Q5VTH2 177 aa-0.83□□□□□ -2.54
SNORD28-201ENST00000384706 TEX29Q8N6K0 151 aa-0.83□□□□□ -2.54
SNORD28-201ENST00000384706 MORN4Q8NDC4 146 aa-0.83□□□□□ -2.54
SNORD28-201ENST00000384706 ATP6V1G3Q96LB4 118 aa-0.83□□□□□ -2.54
SNORD28-201ENST00000384706 SDF2Q99470 211 aa-0.83□□□□□ -2.54
SNORD28-201ENST00000384706 LXNQ9BS40 222 aa-0.83□□□□□ -2.54
SNORD28-201ENST00000384706 C9orf16Q9BUW7 83 aa-0.83□□□□□ -2.54
SNORD28-201ENST00000384706 SSR3Q9UNL2 185 aa-0.83□□□□□ -2.54
SNORD28-201ENST00000384706 ATP6V1DQ9Y5K8 247 aa-0.83□□□□□ -2.54
SNORD28-201ENST00000384706 WDR97A6NE52 1622 aa-0.83□□□□□ -2.54
SNORD28-201ENST00000384706 FAM135BQ49AJ0 1406 aa-0.83□□□□□ -2.54
SNORD28-201ENST00000384706 ACACAQ13085 2346 aa-0.83□□□□□ -2.54
SNORD28-201ENST00000384706 TEP1Q99973 2627 aaKnown RBP-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 HTTP42858 3142 aa-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 NUP210Q8TEM1 1887 aaPredicted RBP-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 CCDC171Q6TFL3 1326 aa-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 KNL1Q8NG31 2342 aa-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 TRBV27A0A0K0K1C4 114 aa-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 PPP5D1E7EU14 171 aa-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 GABARAPH6UMI1 98 aa-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 CSN2P05814 226 aa-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 TPM3P06753 285 aa-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 SLC25A6P12236 298 aa-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 SDC2P34741 201 aa-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 ERVS71-1P61550 626 aa-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 LSM3P62310 102 aaKnown RBP-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 LSM6P62312 80 aaKnown RBP-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 RPL19P84098 196 aaKnown RBP-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 SPA17Q15506 151 aa-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 DEFB105AQ8NG35 78 aa-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 WFDC6Q9BQY6 131 aa-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 LRTM1Q9HBL6 345 aa-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 LYRM2Q9NU23 88 aaPredicted RBP-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 MED11Q9P086 117 aa-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 LAMTOR3Q9UHA4 124 aa-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 PRNDQ9UKY0 176 aa-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 NDUFAF1Q9Y375 327 aa-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 NUBP2Q9Y5Y2 271 aa-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 TECPR2O15040 1411 aa-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 ZFYVE9O95405 1425 aa-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 PRKDCP78527 4128 aaKnown RBP-0.84□□□□□ -2.54
SNORD28-201ENST00000384706 PTPRMP28827 1452 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 MYH2Q9UKX2 1941 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 TRAV13-1A0A0B4J241 112 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 TRAV12-3A0A0B4J271 114 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 PNMA8CA0A1B0GUJ8 204 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 TRDV1A0A1B0GX56 115 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 FAM92AA1XBS5 289 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 J3KT08 172 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 PCF11O94913 1555 aaKnown RBP-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 S100A6P06703 90 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 SMIM6P0DI80 62 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 CRYGSP22914 178 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 CEBPGP53567 150 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 PCBD1P61457 104 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 TPM4P67936 248 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 BASP1P80723 227 aaKnown RBP-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 SPCS2Q15005 226 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 TMED2Q15363 201 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 AKR1C8PQ5T2L2 129 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 Q5VV11 94 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 SLC25A26Q70HW3 274 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 LINC00305Q7Z4B0 112 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 NDUFA11Q86Y39 141 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 CARD19Q96LW7 228 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 LLPHQ9BRT6 129 aaKnown RBP-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 LINC00472Q9H8W2 130 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 TAS2R8Q9NYW2 309 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 SS18L2Q9UHA2 77 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 ERG28Q9UKR5 140 aa-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 KDM5AP29375 1690 aaKnown RBP-0.85□□□□□ -2.55
SNORD28-201ENST00000384706 KIAA1109Q2LD37 5005 aa-0.86□□□□□ -2.55
SNORD28-201ENST00000384706 CASKIN1Q8WXD9 1431 aa-0.86□□□□□ -2.55
SNORD28-201ENST00000384706 XIRP1Q702N8 1843 aaKnown RBP-0.86□□□□□ -2.55
SNORD28-201ENST00000384706 M0QZK8 103 aa-0.86□□□□□ -2.55
SNORD28-201ENST00000384706 ATG12O94817 140 aa-0.86□□□□□ -2.55
SNORD28-201ENST00000384706 HBDP02042 147 aa-0.86□□□□□ -2.55
SNORD28-201ENST00000384706 CST2P09228 141 aa-0.86□□□□□ -2.55
SNORD28-201ENST00000384706 SRP9P49458 86 aaKnown RBP-0.86□□□□□ -2.55
SNORD28-201ENST00000384706 CRYBA4P53673 196 aa-0.86□□□□□ -2.55
SNORD28-201ENST00000384706 PLGLB1Q02325 96 aa-0.86□□□□□ -2.55
SNORD28-201ENST00000384706 LTC4SQ16873 150 aa-0.86□□□□□ -2.55
SNORD28-201ENST00000384706 BAGE3Q86Y29 109 aa-0.86□□□□□ -2.55
SNORD28-201ENST00000384706 NUP35Q8NFH5 326 aa-0.86□□□□□ -2.55
SNORD28-201ENST00000384706 DYNLRB2Q8TF09 96 aa-0.86□□□□□ -2.55
SNORD28-201ENST00000384706 SH3BGRL3Q9H299 93 aa-0.86□□□□□ -2.55
SNORD28-201ENST00000384706 ARMC1Q9NVT9 282 aa-0.86□□□□□ -2.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms