RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 NOP10Q9NPE3 64 aaKnown RBP19.31■□□□□ 0.68
MSX1-201ENST00000382723 X6R8D5 127 aa19.31■□□□□ 0.68
MSX1-201ENST00000382723 PLAC8L1A1L4L8 177 aa19.3■□□□□ 0.68
MSX1-201ENST00000382723 Q0VG73 95 aa19.3■□□□□ 0.68
MSX1-201ENST00000382723 OR10J3Q5JRS4 329 aa19.3■□□□□ 0.68
MSX1-201ENST00000382723 TRGV1A0A0A0MS02 117 aa19.29■□□□□ 0.68
MSX1-201ENST00000382723 A8MZ25 164 aa19.29■□□□□ 0.68
MSX1-201ENST00000382723 GATA1P15976 413 aaPredicted RBP19.29■□□□□ 0.68
MSX1-201ENST00000382723 EMP1P54849 157 aa19.29■□□□□ 0.68
MSX1-201ENST00000382723 PTH2Q96A98 100 aa19.29■□□□□ 0.68
MSX1-201ENST00000382723 DNAH3Q8TD57 4116 aa19.29■□□□□ 0.68
MSX1-201ENST00000382723 CRYGDP07320 174 aa19.28■□□□□ 0.68
MSX1-201ENST00000382723 LINC00315P59091 139 aa19.28■□□□□ 0.68
MSX1-201ENST00000382723 PDZD11Q5EBL8 140 aa19.28■□□□□ 0.68
MSX1-201ENST00000382723 HOXA5P20719 270 aa19.27■□□□□ 0.68
MSX1-201ENST00000382723 OR11H2Q8NH07 326 aa19.27■□□□□ 0.68
MSX1-201ENST00000382723 F5H697 171 aa19.27■□□□□ 0.67
MSX1-201ENST00000382723 PPBPP02775 128 aa19.27■□□□□ 0.67
MSX1-201ENST00000382723 NPYP01303 97 aa19.26■□□□□ 0.67
MSX1-201ENST00000382723 DAZ2Q13117 558 aaKnown RBP19.26■□□□□ 0.67
MSX1-201ENST00000382723 COA6Q5JTJ3 125 aaKnown RBP19.26■□□□□ 0.67
MSX1-201ENST00000382723 Q6ZTI0 123 aa19.26■□□□□ 0.67
MSX1-201ENST00000382723 Q6ZWC4 215 aa19.26■□□□□ 0.67
MSX1-201ENST00000382723 RASL10AQ92737 203 aa19.26■□□□□ 0.67
MSX1-201ENST00000382723 IGHV3-73A0A0B4J1V6 119 aa19.25■□□□□ 0.67
MSX1-201ENST00000382723 PIK3CD-AS1Q5SR53 167 aa19.25■□□□□ 0.67
MSX1-201ENST00000382723 MRAP2Q96G30 205 aa19.25■□□□□ 0.67
MSX1-201ENST00000382723 C12orf57Q99622 126 aa19.25■□□□□ 0.67
MSX1-201ENST00000382723 SMIM9A6NGZ8 99 aa19.25■□□□□ 0.67
MSX1-201ENST00000382723 A8MWV9 139 aa19.25■□□□□ 0.67
MSX1-201ENST00000382723 SERF1AO75920 110 aa19.25■□□□□ 0.67
MSX1-201ENST00000382723 ZNF56Q15929 161 aa19.25■□□□□ 0.67
MSX1-201ENST00000382723 RNF183Q96D59 192 aa19.25■□□□□ 0.67
MSX1-201ENST00000382723 IFITM10A6NMD0 228 aa19.24■□□□□ 0.67
MSX1-201ENST00000382723 NUPR1O60356 82 aa19.24■□□□□ 0.67
MSX1-201ENST00000382723 LINC00310P59036 64 aa19.23■□□□□ 0.67
MSX1-201ENST00000382723 CFAP126Q5VTH2 177 aa19.23■□□□□ 0.67
MSX1-201ENST00000382723 NOTCH1P46531 2555 aa19.23■□□□□ 0.67
MSX1-201ENST00000382723 NBEAL2Q6ZNJ1 2754 aa19.23■□□□□ 0.67
MSX1-201ENST00000382723 LOC389332A0A1B0GUA5 103 aa19.23■□□□□ 0.67
MSX1-201ENST00000382723 TNFRSF6BO95407 300 aa19.23■□□□□ 0.67
MSX1-201ENST00000382723 KPRPQ5T749 579 aaPredicted RBP19.23■□□□□ 0.67
MSX1-201ENST00000382723 POM121L12Q8N7R1 296 aa19.23■□□□□ 0.67
MSX1-201ENST00000382723 LGALS9BQ3B8N2 356 aa19.22■□□□□ 0.67
MSX1-201ENST00000382723 SUMO4Q6EEV6 95 aa19.22■□□□□ 0.67
MSX1-201ENST00000382723 OVOL2Q9BRP0 275 aa19.21■□□□□ 0.67
MSX1-201ENST00000382723 GAGE12BA1L429 117 aa19.21■□□□□ 0.67
MSX1-201ENST00000382723 GAGE7O76087 117 aa19.21■□□□□ 0.67
MSX1-201ENST00000382723 GAGE12FP0CL80 117 aa19.21■□□□□ 0.67
MSX1-201ENST00000382723 GAGE12GP0CL81 117 aa19.21■□□□□ 0.67
MSX1-201ENST00000382723 GAGE12IP0CL82 117 aa19.21■□□□□ 0.67
MSX1-201ENST00000382723 HIST3H2BBQ8N257 126 aa19.21■□□□□ 0.67
MSX1-201ENST00000382723 NRACQ8N912 160 aa19.21■□□□□ 0.67
MSX1-201ENST00000382723 MGAM2Q2M2H8 2515 aa19.2■□□□□ 0.66
MSX1-201ENST00000382723 RNASEKQ6P5S7 137 aaKnown RBP19.2■□□□□ 0.66
MSX1-201ENST00000382723 NIT1Q86X76 327 aa19.2■□□□□ 0.66
MSX1-201ENST00000382723 RPL39LQ96EH5 51 aaKnown RBP19.2■□□□□ 0.66
MSX1-201ENST00000382723 K7EIL1 84 aa19.19■□□□□ 0.66
MSX1-201ENST00000382723 DEFB4AO15263 64 aa19.19■□□□□ 0.66
MSX1-201ENST00000382723 RS1O15537 224 aa19.19■□□□□ 0.66
MSX1-201ENST00000382723 NDUFAF3Q9BU61 184 aa19.19■□□□□ 0.66
MSX1-201ENST00000382723 LAMTOR2Q9Y2Q5 125 aa19.19■□□□□ 0.66
MSX1-201ENST00000382723 IGHV4-28A0A0C4DH34 117 aa19.19■□□□□ 0.66
MSX1-201ENST00000382723 RETNQ9HD89 108 aa19.19■□□□□ 0.66
MSX1-201ENST00000382723 SMIM6P0DI80 62 aa19.18■□□□□ 0.66
MSX1-201ENST00000382723 UFSP1Q6NVU6 142 aa19.18■□□□□ 0.66
MSX1-201ENST00000382723 OR4C5Q8NGB2 326 aa19.18■□□□□ 0.66
MSX1-201ENST00000382723 PRSS3P2Q8NHM4 247 aa19.18■□□□□ 0.66
MSX1-201ENST00000382723 URB1-AS1Q96HZ7 61 aa19.18■□□□□ 0.66
MSX1-201ENST00000382723 NBEAL1Q6ZS30 2694 aa19.18■□□□□ 0.66
MSX1-201ENST00000382723 MAP1LC3AQ9H492 121 aa19.17■□□□□ 0.66
MSX1-201ENST00000382723 TRGV2A0A075B6R0 118 aa19.17■□□□□ 0.66
MSX1-201ENST00000382723 IGHV3-53P01767 116 aa19.17■□□□□ 0.66
MSX1-201ENST00000382723 S100A2P29034 98 aa19.17■□□□□ 0.66
MSX1-201ENST00000382723 IFI27P40305 119 aaPredicted RBP19.17■□□□□ 0.66
MSX1-201ENST00000382723 DEFB121Q5J5C9 76 aa19.17■□□□□ 0.66
MSX1-201ENST00000382723 MIFP14174 115 aa19.15■□□□□ 0.66
MSX1-201ENST00000382723 Q8NAQ8 132 aa19.15■□□□□ 0.66
MSX1-201ENST00000382723 ZNF479Q96JC4 524 aa19.15■□□□□ 0.66
MSX1-201ENST00000382723 RHODO00212 210 aa19.15■□□□□ 0.66
MSX1-201ENST00000382723 LINC00614P0C842 121 aa19.15■□□□□ 0.66
MSX1-201ENST00000382723 DEFB130BP0DP73 79 aa19.14■□□□□ 0.65
MSX1-201ENST00000382723 DEFB130AP0DP74 79 aa19.14■□□□□ 0.65
MSX1-201ENST00000382723 Q6ZSN1 163 aa19.14■□□□□ 0.65
MSX1-201ENST00000382723 M0QY20 66 aa19.13■□□□□ 0.65
MSX1-201ENST00000382723 TRAV4A0A0B4J268 109 aa19.13■□□□□ 0.65
MSX1-201ENST00000382723 FA2HQ7L5A8 372 aa19.13■□□□□ 0.65
MSX1-201ENST00000382723 ESDP10768 282 aa19.12■□□□□ 0.65
MSX1-201ENST00000382723 FABP4P15090 132 aa19.12■□□□□ 0.65
MSX1-201ENST00000382723 KRTAP21-3Q3LHN1 58 aa19.12■□□□□ 0.65
MSX1-201ENST00000382723 TP53TG1Q9Y2A0 90 aa19.12■□□□□ 0.65
MSX1-201ENST00000382723 HSBP1O75506 76 aa19.12■□□□□ 0.65
MSX1-201ENST00000382723 PMCHP20382 165 aa19.12■□□□□ 0.65
MSX1-201ENST00000382723 FAM222AQ5U5X8 452 aa19.12■□□□□ 0.65
MSX1-201ENST00000382723 ZFP2Q6ZN57 461 aa19.12■□□□□ 0.65
MSX1-201ENST00000382723 FAM19A2Q8N3H0 131 aa19.12■□□□□ 0.65
MSX1-201ENST00000382723 PPP1R17O96001 155 aa19.11■□□□□ 0.65
MSX1-201ENST00000382723 SBSPONQ8IVN8 264 aa19.11■□□□□ 0.65
MSX1-201ENST00000382723 CHCHD1Q96BP2 118 aaKnown RBP19.11■□□□□ 0.65
MSX1-201ENST00000382723 HIST1H2BLQ99880 126 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms