RNA–Protein interactions for RNA: ENST00000381575.6

SHOX-202, Transcript of short stature homeobox, humanhuman

TSL 1 (best) BASIC

Gene SHOX, Length 1,351 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-202ENST00000381575 M0R381 172 aa9.38□□□□□ -0.91
SHOX-202ENST00000381575 LAGE3Q14657 143 aa9.38□□□□□ -0.91
SHOX-202ENST00000381575 FAM162BQ5T6X4 162 aa9.38□□□□□ -0.91
SHOX-202ENST00000381575 SYT8Q8NBV8 401 aa9.38□□□□□ -0.91
SHOX-202ENST00000381575 LINC01620Q4KN68 170 aa9.37□□□□□ -0.91
SHOX-202ENST00000381575 PIK3CD-AS1Q5SR53 167 aa9.37□□□□□ -0.91
SHOX-202ENST00000381575 FMC1Q96HJ9 113 aa9.37□□□□□ -0.91
SHOX-202ENST00000381575 TMEM70Q9BUB7 260 aa9.37□□□□□ -0.91
SHOX-202ENST00000381575 TM2D2Q9BX73 214 aa9.37□□□□□ -0.91
SHOX-202ENST00000381575 ZFP30Q9Y2G7 519 aa9.37□□□□□ -0.91
SHOX-202ENST00000381575 PHLDA3Q9Y5J5 127 aa9.37□□□□□ -0.91
SHOX-202ENST00000381575 TPT1P13693 172 aaKnown RBP9.37□□□□□ -0.91
SHOX-202ENST00000381575 AKR1C3P42330 323 aa9.37□□□□□ -0.91
SHOX-202ENST00000381575 DNLZQ5SXM8 178 aa9.37□□□□□ -0.91
SHOX-202ENST00000381575 BAALCQ8WXS3 180 aa9.37□□□□□ -0.91
SHOX-202ENST00000381575 NKX6-2Q9C056 277 aaPredicted RBP9.37□□□□□ -0.91
SHOX-202ENST00000381575 BOLA1Q9Y3E2 137 aa9.37□□□□□ -0.91
SHOX-202ENST00000381575 FAM229AH3BQW9 127 aa9.36□□□□□ -0.91
SHOX-202ENST00000381575 RHODO00212 210 aa9.36□□□□□ -0.91
SHOX-202ENST00000381575 PAGE4O60829 102 aa9.36□□□□□ -0.91
SHOX-202ENST00000381575 LTAP01374 205 aa9.36□□□□□ -0.91
SHOX-202ENST00000381575 RPL19P84098 196 aaKnown RBP9.36□□□□□ -0.91
SHOX-202ENST00000381575 ZNF674Q2M3X9 581 aa9.36□□□□□ -0.91
SHOX-202ENST00000381575 LINC01559Q495D7 138 aa9.36□□□□□ -0.91
SHOX-202ENST00000381575 COX8CQ7Z4L0 72 aa9.36□□□□□ -0.91
SHOX-202ENST00000381575 SFRP2Q96HF1 295 aa9.36□□□□□ -0.91
SHOX-202ENST00000381575 TRAV8-3A0A0A6YYJ7 113 aa9.35□□□□□ -0.91
SHOX-202ENST00000381575 RGS21Q2M5E4 152 aa9.35□□□□□ -0.91
SHOX-202ENST00000381575 NIT1Q86X76 327 aa9.35□□□□□ -0.91
SHOX-202ENST00000381575 STOML3Q8TAV4 291 aa9.35□□□□□ -0.91
SHOX-202ENST00000381575 KLK12Q9UKR0 248 aa9.35□□□□□ -0.91
SHOX-202ENST00000381575 A0A087WWC5 75 aa9.34□□□□□ -0.91
SHOX-202ENST00000381575 MUC21A0A0G2JKD1 596 aa9.34□□□□□ -0.91
SHOX-202ENST00000381575 MUC21A0A140T8X8 626 aa9.34□□□□□ -0.91
SHOX-202ENST00000381575 SCO2A0A1W2PP80 73 aa9.34□□□□□ -0.91
SHOX-202ENST00000381575 FAM213BQ8TBF2 198 aa9.34□□□□□ -0.91
SHOX-202ENST00000381575 URGCP-MRPS24S4R325 110 aa9.34□□□□□ -0.91
SHOX-202ENST00000381575 IGKV2D-24A0A075B6R9 120 aa9.33□□□□□ -0.92
SHOX-202ENST00000381575 ZFP82Q8N141 532 aa9.33□□□□□ -0.92
SHOX-202ENST00000381575 OR10AG1Q8NH19 301 aa9.33□□□□□ -0.92
SHOX-202ENST00000381575 SFT2D1Q8WV19 159 aa9.33□□□□□ -0.92
SHOX-202ENST00000381575 TRBV6-1A0A0K0K1D8 114 aa9.32□□□□□ -0.92
SHOX-202ENST00000381575 SSTP61278 116 aa9.32□□□□□ -0.92
SHOX-202ENST00000381575 TOR2AQ5JU69 321 aa9.32□□□□□ -0.92
SHOX-202ENST00000381575 UBE2WQ96B02 151 aa9.32□□□□□ -0.92
SHOX-202ENST00000381575 UBE2D3P61077 147 aa9.31□□□□□ -0.92
SHOX-202ENST00000381575 UBE2D2P62837 147 aa9.31□□□□□ -0.92
SHOX-202ENST00000381575 RPL36AP83881 106 aaKnown RBP9.31□□□□□ -0.92
SHOX-202ENST00000381575 ZNF56Q15929 161 aa9.31□□□□□ -0.92
SHOX-202ENST00000381575 PRR27Q6MZM9 219 aa9.31□□□□□ -0.92
SHOX-202ENST00000381575 KCNRGQ8N5I3 272 aa9.31□□□□□ -0.92
SHOX-202ENST00000381575 RPL36ALQ969Q0 106 aaKnown RBP9.31□□□□□ -0.92
SHOX-202ENST00000381575 A0A087WX48 190 aa9.3□□□□□ -0.92
SHOX-202ENST00000381575 TCEAL7Q9BRU2 100 aa9.3□□□□□ -0.92
SHOX-202ENST00000381575 ZNF471Q9BX82 626 aaPredicted RBP9.3□□□□□ -0.92
SHOX-202ENST00000381575 TRBV7-3A0A075B6L6 115 aa9.29□□□□□ -0.92
SHOX-202ENST00000381575 Q6ZSA8 131 aa9.29□□□□□ -0.92
SHOX-202ENST00000381575 BAGE2Q86Y30 109 aa9.29□□□□□ -0.92
SHOX-202ENST00000381575 LINC00528Q8N1L1 170 aa9.29□□□□□ -0.92
SHOX-202ENST00000381575 NEXN-AS1Q8NBZ9 246 aa9.29□□□□□ -0.92
SHOX-202ENST00000381575 MBD3L1Q8WWY6 194 aa9.29□□□□□ -0.92
SHOX-202ENST00000381575 RMI2Q96E14 147 aa9.29□□□□□ -0.92
SHOX-202ENST00000381575 TRBV10-1A0A0K0K1A3 114 aa9.28□□□□□ -0.92
SHOX-202ENST00000381575 RBFOX3A6NFN3 312 aa9.28□□□□□ -0.92
SHOX-202ENST00000381575 TMEM262E9PQX1 116 aa9.28□□□□□ -0.92
SHOX-202ENST00000381575 PFDN1O60925 122 aa9.28□□□□□ -0.92
SHOX-202ENST00000381575 C1QBP02746 253 aa9.28□□□□□ -0.92
SHOX-202ENST00000381575 SEC11BP0C7V7 166 aa9.28□□□□□ -0.92
SHOX-202ENST00000381575 ZNF345Q14585 488 aa9.28□□□□□ -0.92
SHOX-202ENST00000381575 MLST8Q9BVC4 326 aa9.28□□□□□ -0.92
SHOX-202ENST00000381575 BCL2L11O43521 198 aa9.27□□□□□ -0.93
SHOX-202ENST00000381575 MPV17L2Q567V2 206 aa9.27□□□□□ -0.93
SHOX-202ENST00000381575 KCNIP4Q6PIL6 250 aa9.27□□□□□ -0.93
SHOX-202ENST00000381575 SCXQ7RTU7 201 aa9.27□□□□□ -0.93
SHOX-202ENST00000381575 C15orf54Q8N8G6 183 aa9.27□□□□□ -0.93
SHOX-202ENST00000381575 DERL1Q9BUN8 251 aa9.27□□□□□ -0.93
SHOX-202ENST00000381575 COX11Q9Y6N1 276 aa9.27□□□□□ -0.93
SHOX-202ENST00000381575 TRBV6-8A0A0A6YYG3 113 aa9.26□□□□□ -0.93
SHOX-202ENST00000381575 UMAD1C9J7I0 102 aa9.26□□□□□ -0.93
SHOX-202ENST00000381575 RAB4BP61018 213 aa9.26□□□□□ -0.93
SHOX-202ENST00000381575 SPANXN1Q5VSR9 72 aa9.26□□□□□ -0.93
SHOX-202ENST00000381575 OR10G8Q8NGN5 311 aa9.26□□□□□ -0.93
SHOX-202ENST00000381575 LRP1Q07954 4544 aaKnown RBP9.26□□□□□ -0.93
SHOX-202ENST00000381575 KANTRA0A1W2PQU2 76 aa9.25□□□□□ -0.93
SHOX-202ENST00000381575 F5H697 171 aa9.25□□□□□ -0.93
SHOX-202ENST00000381575 SNAI2O43623 268 aa9.25□□□□□ -0.93
SHOX-202ENST00000381575 S100A9P06702 114 aaKnown RBP9.25□□□□□ -0.93
SHOX-202ENST00000381575 H2AFB1P0C5Y9 115 aa9.25□□□□□ -0.93
SHOX-202ENST00000381575 GZMBP10144 247 aa9.25□□□□□ -0.93
SHOX-202ENST00000381575 RPL35P42766 123 aaKnown RBP9.25□□□□□ -0.93
SHOX-202ENST00000381575 CCL20P78556 96 aa9.25□□□□□ -0.93
SHOX-202ENST00000381575 ENHOQ6UWT2 76 aa9.25□□□□□ -0.93
SHOX-202ENST00000381575 TMUB2Q71RG4 321 aa9.25□□□□□ -0.93
SHOX-202ENST00000381575 Q8N976 141 aa9.25□□□□□ -0.93
SHOX-202ENST00000381575 A0A0D9SG52 128 aa9.24□□□□□ -0.93
SHOX-202ENST00000381575 HMSDA8MTL9 139 aa9.24□□□□□ -0.93
SHOX-202ENST00000381575 ANGP03950 147 aaKnown RBP9.24□□□□□ -0.93
SHOX-202ENST00000381575 ELOBQ15370 118 aa9.24□□□□□ -0.93
SHOX-202ENST00000381575 CLPSL2Q6UWE3 100 aa9.24□□□□□ -0.93
SHOX-202ENST00000381575 CHCHD5Q9BSY4 110 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms