RNA–Protein interactions for RNA: ENST00000381089.7

VCX3A-201, Transcript of variable charge X-linked 3A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VCX3A, Length 995 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-201ENST00000381089 LYPD6BQ8NI32 183 aa10.62□□□□□ -0.71
VCX3A-201ENST00000381089 COX11Q9Y6N1 276 aa10.62□□□□□ -0.71
VCX3A-201ENST00000381089 SERTM2A0A1B0GWG4 89 aa10.61□□□□□ -0.71
VCX3A-201ENST00000381089 RS1O15537 224 aa10.61□□□□□ -0.71
VCX3A-201ENST00000381089 MGST1P10620 155 aaKnown RBP10.61□□□□□ -0.71
VCX3A-201ENST00000381089 RAB14P61106 215 aa10.61□□□□□ -0.71
VCX3A-201ENST00000381089 MEF2BQ02080 365 aaPredicted RBP10.61□□□□□ -0.71
VCX3A-201ENST00000381089 HIST1H2BAQ96A08 127 aa10.61□□□□□ -0.71
VCX3A-201ENST00000381089 VAX2Q9UIW0 290 aa10.61□□□□□ -0.71
VCX3A-201ENST00000381089 PSG8Q9UQ74 426 aa10.61□□□□□ -0.71
VCX3A-201ENST00000381089 IGHV3-73A0A0B4J1V6 119 aa10.6□□□□□ -0.71
VCX3A-201ENST00000381089 RBFOX3A6NFN3 312 aa10.6□□□□□ -0.71
VCX3A-201ENST00000381089 FLI1Q01543 452 aaPredicted RBP10.6□□□□□ -0.71
VCX3A-201ENST00000381089 TMEM75Q8N9X5 138 aa10.6□□□□□ -0.71
VCX3A-201ENST00000381089 TCEAL7Q9BRU2 100 aa10.6□□□□□ -0.71
VCX3A-201ENST00000381089 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.59□□□□□ -0.71
VCX3A-201ENST00000381089 IGLV2-11P01706 119 aa10.59□□□□□ -0.71
VCX3A-201ENST00000381089 UBE2G1P62253 170 aa10.59□□□□□ -0.71
VCX3A-201ENST00000381089 Q86TA4 180 aa10.59□□□□□ -0.71
VCX3A-201ENST00000381089 RMI2Q96E14 147 aa10.59□□□□□ -0.71
VCX3A-201ENST00000381089 EIF5A2Q9GZV4 153 aaKnown RBP10.59□□□□□ -0.71
VCX3A-201ENST00000381089 LECT2O14960 151 aa10.58□□□□□ -0.72
VCX3A-201ENST00000381089 TAGLN2P37802 199 aaKnown RBP10.58□□□□□ -0.72
VCX3A-201ENST00000381089 ZNF506Q5JVG8 444 aa10.58□□□□□ -0.72
VCX3A-201ENST00000381089 TVP23CQ96ET8 276 aa10.58□□□□□ -0.72
VCX3A-201ENST00000381089 FAM210AQ96ND0 272 aa10.58□□□□□ -0.72
VCX3A-201ENST00000381089 DERL1Q9BUN8 251 aa10.58□□□□□ -0.72
VCX3A-201ENST00000381089 PDE6DO43924 150 aa10.57□□□□□ -0.72
VCX3A-201ENST00000381089 CEBPGP53567 150 aa10.57□□□□□ -0.72
VCX3A-201ENST00000381089 WFDC2Q14508 124 aa10.57□□□□□ -0.72
VCX3A-201ENST00000381089 C11orf52Q96A22 123 aa10.57□□□□□ -0.72
VCX3A-201ENST00000381089 PTH2Q96A98 100 aa10.57□□□□□ -0.72
VCX3A-201ENST00000381089 FMC1Q96HJ9 113 aa10.57□□□□□ -0.72
VCX3A-201ENST00000381089 MED9Q9NWA0 146 aa10.57□□□□□ -0.72
VCX3A-201ENST00000381089 URGCP-MRPS24S4R325 110 aa10.57□□□□□ -0.72
VCX3A-201ENST00000381089 A0A087WWC5 75 aa10.56□□□□□ -0.72
VCX3A-201ENST00000381089 RPL35P42766 123 aaKnown RBP10.56□□□□□ -0.72
VCX3A-201ENST00000381089 CLLU1Q5K131 121 aa10.56□□□□□ -0.72
VCX3A-201ENST00000381089 SCXQ7RTU7 201 aa10.56□□□□□ -0.72
VCX3A-201ENST00000381089 Q8N976 141 aa10.56□□□□□ -0.72
VCX3A-201ENST00000381089 C9orf85Q96MD7 179 aa10.56□□□□□ -0.72
VCX3A-201ENST00000381089 GAGE12JA6NER3 117 aa10.55□□□□□ -0.72
VCX3A-201ENST00000381089 A8MWV9 139 aa10.55□□□□□ -0.72
VCX3A-201ENST00000381089 GCGP01275 180 aa10.55□□□□□ -0.72
VCX3A-201ENST00000381089 GAGE1Q13065 139 aa10.55□□□□□ -0.72
VCX3A-201ENST00000381089 GAGE4Q13068 117 aa10.55□□□□□ -0.72
VCX3A-201ENST00000381089 GAGE5Q13069 117 aa10.55□□□□□ -0.72
VCX3A-201ENST00000381089 GAGE13Q4V321 117 aa10.55□□□□□ -0.72
VCX3A-201ENST00000381089 ZFP2Q6ZN57 461 aa10.55□□□□□ -0.72
VCX3A-201ENST00000381089 DAZ4Q86SG3 579 aaKnown RBP10.55□□□□□ -0.72
VCX3A-201ENST00000381089 BAALCQ8WXS3 180 aa10.55□□□□□ -0.72
VCX3A-201ENST00000381089 DAZ3Q9NR90 486 aaKnown RBP10.55□□□□□ -0.72
VCX3A-201ENST00000381089 RAB19A4D1S5 217 aa10.54□□□□□ -0.72
VCX3A-201ENST00000381089 PGPEP1LA6NFU8 196 aa10.54□□□□□ -0.72
VCX3A-201ENST00000381089 OXTP01178 125 aa10.54□□□□□ -0.72
VCX3A-201ENST00000381089 SRSF3P84103 164 aaKnown RBP10.54□□□□□ -0.72
VCX3A-201ENST00000381089 ZNF674Q2M3X9 581 aa10.54□□□□□ -0.72
VCX3A-201ENST00000381089 SMUG1Q53HV7 270 aa10.54□□□□□ -0.72
VCX3A-201ENST00000381089 LTAP01374 205 aa10.53□□□□□ -0.72
VCX3A-201ENST00000381089 S100A9P06702 114 aaKnown RBP10.53□□□□□ -0.72
VCX3A-201ENST00000381089 S100A4P26447 101 aaKnown RBP10.53□□□□□ -0.72
VCX3A-201ENST00000381089 CENPWQ5EE01 88 aa10.53□□□□□ -0.72
VCX3A-201ENST00000381089 PIK3CD-AS1Q5SR53 167 aa10.53□□□□□ -0.72
VCX3A-201ENST00000381089 SAPCD1Q5SSQ6 148 aa10.53□□□□□ -0.72
VCX3A-201ENST00000381089 BAGE2Q86Y30 109 aa10.53□□□□□ -0.72
VCX3A-201ENST00000381089 Q8N3U1 123 aa10.53□□□□□ -0.72
VCX3A-201ENST00000381089 CHAC1Q9BUX1 264 aa10.53□□□□□ -0.72
VCX3A-201ENST00000381089 PARLQ9H300 379 aa10.53□□□□□ -0.72
VCX3A-201ENST00000381089 HMCN2Q8NDA2 5059 aa10.52□□□□□ -0.73
VCX3A-201ENST00000381089 TRBV6-1A0A0K0K1D8 114 aa10.52□□□□□ -0.73
VCX3A-201ENST00000381089 C9JQL5 133 aa10.52□□□□□ -0.73
VCX3A-201ENST00000381089 ZNF80P51504 273 aaPredicted RBP10.52□□□□□ -0.73
VCX3A-201ENST00000381089 KCNIP4Q6PIL6 250 aa10.52□□□□□ -0.73
VCX3A-201ENST00000381089 ZC2HC1AQ96GY0 325 aa10.52□□□□□ -0.73
VCX3A-201ENST00000381089 C11orf21Q9P2W6 132 aa10.52□□□□□ -0.73
VCX3A-201ENST00000381089 ZFP30Q9Y2G7 519 aa10.52□□□□□ -0.73
VCX3A-201ENST00000381089 IGKV2D-24A0A075B6R9 120 aa10.51□□□□□ -0.73
VCX3A-201ENST00000381089 TMEM250H0YL14 139 aa10.51□□□□□ -0.73
VCX3A-201ENST00000381089 SRP19P09132 144 aaKnown RBP10.51□□□□□ -0.73
VCX3A-201ENST00000381089 LINC00694P0DN24 101 aa10.51□□□□□ -0.73
VCX3A-201ENST00000381089 RNASE3P12724 160 aaKnown RBP10.51□□□□□ -0.73
VCX3A-201ENST00000381089 GNG4P50150 75 aa10.51□□□□□ -0.73
VCX3A-201ENST00000381089 PEA15Q15121 130 aa10.51□□□□□ -0.73
VCX3A-201ENST00000381089 ELOBQ15370 118 aa10.51□□□□□ -0.73
VCX3A-201ENST00000381089 LINC01620Q4KN68 170 aa10.51□□□□□ -0.73
VCX3A-201ENST00000381089 PRR27Q6MZM9 219 aa10.5□□□□□ -0.73
VCX3A-201ENST00000381089 PLA2G2DQ9UNK4 145 aa10.5□□□□□ -0.73
VCX3A-201ENST00000381089 LRP1Q07954 4544 aaKnown RBP10.5□□□□□ -0.73
VCX3A-201ENST00000381089 TRBV20OR9-2A0A075B6H5 130 aa10.49□□□□□ -0.73
VCX3A-201ENST00000381089 A0A087WX48 190 aa10.49□□□□□ -0.73
VCX3A-201ENST00000381089 RHODO00212 210 aa10.49□□□□□ -0.73
VCX3A-201ENST00000381089 SH2D1AO60880 128 aa10.49□□□□□ -0.73
VCX3A-201ENST00000381089 ASIPP42127 132 aa10.49□□□□□ -0.73
VCX3A-201ENST00000381089 C14orf177Q52M58 125 aa10.49□□□□□ -0.73
VCX3A-201ENST00000381089 IGLV2-8P01709 118 aa10.48□□□□□ -0.73
VCX3A-201ENST00000381089 CRIP1P50238 77 aa10.48□□□□□ -0.73
VCX3A-201ENST00000381089 NIT1Q86X76 327 aa10.48□□□□□ -0.73
VCX3A-201ENST00000381089 CIRBP-AS1Q8TBR5 109 aa10.48□□□□□ -0.73
VCX3A-201ENST00000381089 SMIM7Q9BQ49 75 aa10.48□□□□□ -0.73
VCX3A-201ENST00000381089 CHCHD7Q9BUK0 85 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms