RNA–Protein interactions for RNA: ENST00000381020.7

CDX2-201, Transcript of caudal type homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX2, Length 4,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-201ENST00000381020 CCL24O00175 119 aa9.47□□□□□ -0.89
CDX2-201ENST00000381020 INSP01308 110 aa9.47□□□□□ -0.89
CDX2-201ENST00000381020 Q8N1Y9 231 aa9.47□□□□□ -0.89
CDX2-201ENST00000381020 OR9G4Q8NGQ1 327 aa9.47□□□□□ -0.89
CDX2-201ENST00000381020 MDFICQ9P1T7 246 aa9.47□□□□□ -0.89
CDX2-201ENST00000381020 IGHV3-38A0A0C4DH36 116 aa9.46□□□□□ -0.89
CDX2-201ENST00000381020 PAPPA-AS1Q5QFB9 102 aa9.46□□□□□ -0.89
CDX2-201ENST00000381020 PRR9Q5T870 116 aa9.46□□□□□ -0.89
CDX2-201ENST00000381020 C18orf65Q6ZTR6 163 aa9.46□□□□□ -0.89
CDX2-201ENST00000381020 LURAP1LQ8IV03 231 aa9.46□□□□□ -0.89
CDX2-201ENST00000381020 PCP2Q8IVA1 136 aa9.46□□□□□ -0.89
CDX2-201ENST00000381020 LGALS9BQ3B8N2 356 aa9.46□□□□□ -0.89
CDX2-201ENST00000381020 LGALS9CQ6DKI2 356 aa9.46□□□□□ -0.89
CDX2-201ENST00000381020 Q6YL49 198 aa9.46□□□□□ -0.89
CDX2-201ENST00000381020 ZNF493Q6ZR52 646 aa9.46□□□□□ -0.9
CDX2-201ENST00000381020 DLX4Q92988 240 aaPredicted RBP9.46□□□□□ -0.9
CDX2-201ENST00000381020 FOXI2Q6ZQN5 318 aa9.45□□□□□ -0.9
CDX2-201ENST00000381020 SPCS1Q9Y6A9 102 aa9.45□□□□□ -0.9
CDX2-201ENST00000381020 ZFAND2AQ8N6M9 145 aa9.45□□□□□ -0.9
CDX2-201ENST00000381020 MRPL16Q9NX20 251 aaKnown RBP9.45□□□□□ -0.9
CDX2-201ENST00000381020 PSMB8P28062 276 aa9.45□□□□□ -0.9
CDX2-201ENST00000381020 COTL1Q14019 142 aa9.45□□□□□ -0.9
CDX2-201ENST00000381020 A0A0U1RRA0 63 aa9.44□□□□□ -0.9
CDX2-201ENST00000381020 HTN3P15516 51 aa9.44□□□□□ -0.9
CDX2-201ENST00000381020 K7ERU9 68 aa9.44□□□□□ -0.9
CDX2-201ENST00000381020 HSD52Q0P140 79 aa9.44□□□□□ -0.9
CDX2-201ENST00000381020 TRGV4A0A0C4DH28 118 aa9.44□□□□□ -0.9
CDX2-201ENST00000381020 J3QR89 54 aa9.44□□□□□ -0.9
CDX2-201ENST00000381020 COX8AP10176 69 aa9.44□□□□□ -0.9
CDX2-201ENST00000381020 LINC01545Q5VT33 79 aa9.44□□□□□ -0.9
CDX2-201ENST00000381020 A0A0J9YX75 114 aa9.43□□□□□ -0.9
CDX2-201ENST00000381020 DNAJC9-AS1A6NH13 148 aa9.43□□□□□ -0.9
CDX2-201ENST00000381020 TMEM262E9PQX1 116 aa9.43□□□□□ -0.9
CDX2-201ENST00000381020 CITED2Q99967 270 aaPredicted RBP9.43□□□□□ -0.9
CDX2-201ENST00000381020 ASH1LQ9NR48 2969 aaKnown RBP9.43□□□□□ -0.9
CDX2-201ENST00000381020 CD5LO43866 347 aa9.43□□□□□ -0.9
CDX2-201ENST00000381020 PLNP26678 52 aa9.43□□□□□ -0.9
CDX2-201ENST00000381020 RNASE13Q5GAN3 156 aaKnown RBP9.43□□□□□ -0.9
CDX2-201ENST00000381020 TMEM238LA0A1B0GVL6 79 aa9.43□□□□□ -0.9
CDX2-201ENST00000381020 A6NJY4 79 aa9.43□□□□□ -0.9
CDX2-201ENST00000381020 IGLV1-40P01703 118 aa9.42□□□□□ -0.9
CDX2-201ENST00000381020 DEFB130BP0DP73 79 aa9.42□□□□□ -0.9
CDX2-201ENST00000381020 DEFB130AP0DP74 79 aa9.42□□□□□ -0.9
CDX2-201ENST00000381020 SRSF2Q01130 221 aaKnown RBP9.42□□□□□ -0.9
CDX2-201ENST00000381020 SUMO4Q6EEV6 95 aa9.42□□□□□ -0.9
CDX2-201ENST00000381020 TRPT1Q86TN4 253 aaKnown RBP9.42□□□□□ -0.9
CDX2-201ENST00000381020 URB1-AS1Q96HZ7 61 aa9.42□□□□□ -0.9
CDX2-201ENST00000381020 K7EMI3 77 aa9.42□□□□□ -0.9
CDX2-201ENST00000381020 C19orf54Q5BKX5 351 aa9.42□□□□□ -0.9
CDX2-201ENST00000381020 COX11Q9Y6N1 276 aa9.41□□□□□ -0.9
CDX2-201ENST00000381020 PRM2P04554 102 aa9.41□□□□□ -0.9
CDX2-201ENST00000381020 SPXQ9BT56 116 aa9.41□□□□□ -0.9
CDX2-201ENST00000381020 CHAC1Q9BUX1 264 aa9.41□□□□□ -0.9
CDX2-201ENST00000381020 RPL39P62891 51 aaKnown RBP9.41□□□□□ -0.9
CDX2-201ENST00000381020 GATD1Q8NB37 220 aa9.41□□□□□ -0.9
CDX2-201ENST00000381020 C20orf78Q9BR46 151 aa9.41□□□□□ -0.9
CDX2-201ENST00000381020 TOMM7Q9P0U1 55 aa9.41□□□□□ -0.9
CDX2-201ENST00000381020 PRSS29PA6NIE9 313 aa9.41□□□□□ -0.9
CDX2-201ENST00000381020 SEC11AP67812 179 aa9.41□□□□□ -0.9
CDX2-201ENST00000381020 ZNF702PQ9H963 129 aa9.41□□□□□ -0.9
CDX2-201ENST00000381020 U3KQE9 123 aa9.41□□□□□ -0.9
CDX2-201ENST00000381020 F8VRH5 84 aa9.4□□□□□ -0.9
CDX2-201ENST00000381020 K7EQG2 157 aa9.4□□□□□ -0.9
CDX2-201ENST00000381020 Q6ZSV7 163 aa9.4□□□□□ -0.9
CDX2-201ENST00000381020 SPATA12Q7Z6I5 190 aa9.4□□□□□ -0.9
CDX2-201ENST00000381020 RNF185Q96GF1 192 aa9.4□□□□□ -0.9
CDX2-201ENST00000381020 TRAV2A0A0B4J234 112 aa9.4□□□□□ -0.91
CDX2-201ENST00000381020 GAGE12BA1L429 117 aa9.39□□□□□ -0.91
CDX2-201ENST00000381020 GAGE7O76087 117 aa9.39□□□□□ -0.91
CDX2-201ENST00000381020 GAGE12FP0CL80 117 aa9.39□□□□□ -0.91
CDX2-201ENST00000381020 GAGE12GP0CL81 117 aa9.39□□□□□ -0.91
CDX2-201ENST00000381020 GAGE12IP0CL82 117 aa9.39□□□□□ -0.91
CDX2-201ENST00000381020 MTURNQ8N3F0 131 aa9.39□□□□□ -0.91
CDX2-201ENST00000381020 MEIG1Q5JSS6 88 aa9.39□□□□□ -0.91
CDX2-201ENST00000381020 ZNRF2Q8NHG8 242 aa9.39□□□□□ -0.91
CDX2-201ENST00000381020 TSSC4Q9Y5U2 329 aaPredicted RBP9.39□□□□□ -0.91
CDX2-201ENST00000381020 CHD6Q8TD26 2715 aa9.39□□□□□ -0.91
CDX2-201ENST00000381020 GAGE12JA6NER3 117 aa9.39□□□□□ -0.91
CDX2-201ENST00000381020 AZU1P20160 251 aa9.39□□□□□ -0.91
CDX2-201ENST00000381020 RPL36AP83881 106 aaKnown RBP9.39□□□□□ -0.91
CDX2-201ENST00000381020 GAGE1Q13065 139 aa9.39□□□□□ -0.91
CDX2-201ENST00000381020 GAGE4Q13068 117 aa9.39□□□□□ -0.91
CDX2-201ENST00000381020 GAGE5Q13069 117 aa9.39□□□□□ -0.91
CDX2-201ENST00000381020 GAGE13Q4V321 117 aa9.39□□□□□ -0.91
CDX2-201ENST00000381020 BVES-AS1Q5T3Y7 98 aa9.39□□□□□ -0.91
CDX2-201ENST00000381020 RPL36ALQ969Q0 106 aaKnown RBP9.39□□□□□ -0.91
CDX2-201ENST00000381020 TMEM89A2RUT3 159 aa9.38□□□□□ -0.91
CDX2-201ENST00000381020 NPC2P61916 151 aa9.38□□□□□ -0.91
CDX2-201ENST00000381020 UBE2V1Q13404 147 aa9.38□□□□□ -0.91
CDX2-201ENST00000381020 ADAMTSL5Q6ZMM2 481 aa9.38□□□□□ -0.91
CDX2-201ENST00000381020 TRAV13-1A0A0B4J241 112 aa9.38□□□□□ -0.91
CDX2-201ENST00000381020 PRADC1Q9BSG0 188 aa9.38□□□□□ -0.91
CDX2-201ENST00000381020 I3L3M4 83 aa9.38□□□□□ -0.91
CDX2-201ENST00000381020 LRRC75A-AS1Q8N1F1 130 aa9.38□□□□□ -0.91
CDX2-201ENST00000381020 SPAG8Q99932 426 aaPredicted RBP9.38□□□□□ -0.91
CDX2-201ENST00000381020 CHCHD5Q9BSY4 110 aa9.38□□□□□ -0.91
CDX2-201ENST00000381020 A0A087WX48 190 aa9.37□□□□□ -0.91
CDX2-201ENST00000381020 A8MWV9 139 aa9.37□□□□□ -0.91
CDX2-201ENST00000381020 PMVKQ15126 192 aa9.37□□□□□ -0.91
CDX2-201ENST00000381020 HLA-DRB4P13762 266 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms