RNA–Protein interactions for RNA: ENST00000380443.5

VPS16-201, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 1 (best)

Gene VPS16, Length 1,825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-201ENST00000380443 H3BMM0 161 aa17.1■□□□□ 0.33
VPS16-201ENST00000380443 CLUHP3Q96NS8 147 aa17.1■□□□□ 0.33
VPS16-201ENST00000380443 Q8N1Y9 231 aa17.1■□□□□ 0.33
VPS16-201ENST00000380443 ZNF418Q8TF45 676 aaPredicted RBP17.1■□□□□ 0.33
VPS16-201ENST00000380443 ZMAT4Q9H898 229 aa17.1■□□□□ 0.33
VPS16-201ENST00000380443 NUDT3O95989 172 aa17.09■□□□□ 0.33
VPS16-201ENST00000380443 PRSS1P07477 247 aa17.09■□□□□ 0.33
VPS16-201ENST00000380443 C18orf15Q96N68 181 aa17.09■□□□□ 0.33
VPS16-201ENST00000380443 TSSC4Q9Y5U2 329 aaPredicted RBP17.09■□□□□ 0.33
VPS16-201ENST00000380443 NSD1Q96L73 2696 aaPredicted RBP17.09■□□□□ 0.33
VPS16-201ENST00000380443 SPRY2O43597 315 aa17.08■□□□□ 0.33
VPS16-201ENST00000380443 CRLF1O75462 422 aa17.08■□□□□ 0.33
VPS16-201ENST00000380443 ODF1Q14990 250 aa17.08■□□□□ 0.33
VPS16-201ENST00000380443 RAX2Q96IS3 184 aa17.08■□□□□ 0.33
VPS16-201ENST00000380443 TCAPO15273 167 aa17.07■□□□□ 0.32
VPS16-201ENST00000380443 BATFQ16520 125 aa17.07■□□□□ 0.32
VPS16-201ENST00000380443 RPL39LQ96EH5 51 aaKnown RBP17.07■□□□□ 0.32
VPS16-201ENST00000380443 DUX3Q96PT4 197 aa17.07■□□□□ 0.32
VPS16-201ENST00000380443 MDFICQ9P1T7 246 aa17.07■□□□□ 0.32
VPS16-201ENST00000380443 KNCNA6PVL3 124 aa17.06■□□□□ 0.32
VPS16-201ENST00000380443 CCL24O00175 119 aa17.06■□□□□ 0.32
VPS16-201ENST00000380443 TOMM6Q96B49 74 aa17.06■□□□□ 0.32
VPS16-201ENST00000380443 MAP6D1Q9H9H5 199 aa17.06■□□□□ 0.32
VPS16-201ENST00000380443 TRBV6-5A0A0K0K1A5 114 aa17.05■□□□□ 0.32
VPS16-201ENST00000380443 LINC00467Q9BRT7 94 aa17.05■□□□□ 0.32
VPS16-201ENST00000380443 MUC4Q99102 2169 aa17.05■□□□□ 0.32
VPS16-201ENST00000380443 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP17.05■□□□□ 0.32
VPS16-201ENST00000380443 DLEU1O43261 78 aa17.05■□□□□ 0.32
VPS16-201ENST00000380443 PIK3CD-AS1Q5SR53 167 aa17.05■□□□□ 0.32
VPS16-201ENST00000380443 LINC01006Q8NI28 216 aa17.05■□□□□ 0.32
VPS16-201ENST00000380443 TRAV12-1A0A0B4J245 112 aa17.04■□□□□ 0.32
VPS16-201ENST00000380443 CD28P10747 220 aa17.04■□□□□ 0.32
VPS16-201ENST00000380443 C12orf54Q6X4T0 127 aa17.04■□□□□ 0.32
VPS16-201ENST00000380443 DKK2Q9UBU2 259 aa17.04■□□□□ 0.32
VPS16-201ENST00000380443 NIPBLQ6KC79 2804 aaeCLIP17.03■□□□□ 0.32
VPS16-201ENST00000380443 VCYO14598 125 aa17.03■□□□□ 0.32
VPS16-201ENST00000380443 DPM2O94777 84 aa17.03■□□□□ 0.32
VPS16-201ENST00000380443 HILS1P60008 231 aa17.03■□□□□ 0.32
VPS16-201ENST00000380443 CD300EQ496F6 205 aaPredicted RBP17.03■□□□□ 0.32
VPS16-201ENST00000380443 SUMO4Q6EEV6 95 aa17.03■□□□□ 0.32
VPS16-201ENST00000380443 PTH2Q96A98 100 aa17.03■□□□□ 0.32
VPS16-201ENST00000380443 CSTL1Q9H114 145 aa17.03■□□□□ 0.32
VPS16-201ENST00000380443 ZNF256Q9Y2P7 627 aaPredicted RBP17.03■□□□□ 0.32
VPS16-201ENST00000380443 CBY3A6NI87 242 aa17.03■□□□□ 0.32
VPS16-201ENST00000380443 NDUFA7O95182 113 aa17.03■□□□□ 0.32
VPS16-201ENST00000380443 IGKCP01834 107 aa17.03■□□□□ 0.32
VPS16-201ENST00000380443 POLR2KP53803 58 aaKnown RBP17.03■□□□□ 0.32
VPS16-201ENST00000380443 CMC4P56277 68 aaPredicted RBP17.03■□□□□ 0.32
VPS16-201ENST00000380443 JMJD8Q96S16 334 aa17.03■□□□□ 0.32
VPS16-201ENST00000380443 ANKRD39Q53RE8 183 aa17.02■□□□□ 0.31
VPS16-201ENST00000380443 A0A087WX48 190 aa17.01■□□□□ 0.31
VPS16-201ENST00000380443 F5H697 171 aa17.01■□□□□ 0.31
VPS16-201ENST00000380443 SIVA1O15304 175 aa17.01■□□□□ 0.31
VPS16-201ENST00000380443 RIPPLY3P57055 190 aa17.01■□□□□ 0.31
VPS16-201ENST00000380443 FN1P02751 2386 aaKnown RBP17.01■□□□□ 0.31
VPS16-201ENST00000380443 SONP18583 2426 aaKnown RBP17.01■□□□□ 0.31
VPS16-201ENST00000380443 CRYGDP07320 174 aa17■□□□□ 0.31
VPS16-201ENST00000380443 HINT1P49773 126 aaPredicted RBP17■□□□□ 0.31
VPS16-201ENST00000380443 BOD1L2Q8IYS8 172 aa17■□□□□ 0.31
VPS16-201ENST00000380443 STPG4Q8N801 248 aa17■□□□□ 0.31
VPS16-201ENST00000380443 SCGB3A1Q96QR1 104 aa17■□□□□ 0.31
VPS16-201ENST00000380443 JPT2Q9H910 190 aa17■□□□□ 0.31
VPS16-201ENST00000380443 A0A087WWL8 130 aa16.99■□□□□ 0.31
VPS16-201ENST00000380443 ZNF876PQ49A33 203 aa16.99■□□□□ 0.31
VPS16-201ENST00000380443 KIR2DL4Q99706 377 aa16.99■□□□□ 0.31
VPS16-201ENST00000380443 CITED2Q99967 270 aaPredicted RBP16.99■□□□□ 0.31
VPS16-201ENST00000380443 EDA2RQ9HAV5 297 aa16.99■□□□□ 0.31
VPS16-201ENST00000380443 RBMY1BA6NDE4 496 aaKnown RBP16.98■□□□□ 0.31
VPS16-201ENST00000380443 RBMY1EA6NEQ0 496 aaKnown RBP16.98■□□□□ 0.31
VPS16-201ENST00000380443 RBMY1DP0C7P1 496 aaKnown RBP16.98■□□□□ 0.31
VPS16-201ENST00000380443 FGF6P10767 208 aa16.98■□□□□ 0.31
VPS16-201ENST00000380443 PLNP26678 52 aa16.98■□□□□ 0.31
VPS16-201ENST00000380443 TRPT1Q86TN4 253 aaKnown RBP16.98■□□□□ 0.31
VPS16-201ENST00000380443 HHLA3Q9XRX5 114 aa16.98■□□□□ 0.31
VPS16-201ENST00000380443 C2orf66Q6UXQ4 117 aa16.98■□□□□ 0.31
VPS16-201ENST00000380443 ERASQ7Z444 233 aa16.98■□□□□ 0.31
VPS16-201ENST00000380443 ANK3Q12955 4377 aaKnown RBP16.97■□□□□ 0.31
VPS16-201ENST00000380443 TRBV27A0A0K0K1C4 114 aa16.97■□□□□ 0.31
VPS16-201ENST00000380443 H7C1H1 209 aa16.97■□□□□ 0.31
VPS16-201ENST00000380443 RBMY1A1P0DJD3 496 aaKnown RBP16.97■□□□□ 0.31
VPS16-201ENST00000380443 RBMY1CP0DJD4 496 aa16.97■□□□□ 0.31
VPS16-201ENST00000380443 ZNF415Q09FC8 603 aa16.97■□□□□ 0.31
VPS16-201ENST00000380443 RBMY1FQ15415 496 aaKnown RBP16.97■□□□□ 0.31
VPS16-201ENST00000380443 AGRNO00468 2067 aa16.97■□□□□ 0.31
VPS16-201ENST00000380443 NF1P21359 2839 aa16.96■□□□□ 0.31
VPS16-201ENST00000380443 M0QY20 66 aa16.96■□□□□ 0.31
VPS16-201ENST00000380443 INSP01308 110 aa16.96■□□□□ 0.31
VPS16-201ENST00000380443 CYSLTR1Q9Y271 337 aa16.96■□□□□ 0.31
VPS16-201ENST00000380443 SETD2Q9BYW2 2564 aaPredicted RBP16.96■□□□□ 0.31
VPS16-201ENST00000380443 A0A1W2PRX2 142 aa16.96■□□□□ 0.3
VPS16-201ENST00000380443 ZNF56Q15929 161 aa16.96■□□□□ 0.3
VPS16-201ENST00000380443 FAM74A4Q5TZK3 123 aa16.95■□□□□ 0.3
VPS16-201ENST00000380443 C2orf91Q6ZV80 131 aa16.95■□□□□ 0.3
VPS16-201ENST00000380443 SDHAF1A6NFY7 115 aa16.94■□□□□ 0.3
VPS16-201ENST00000380443 A8MWV9 139 aa16.94■□□□□ 0.3
VPS16-201ENST00000380443 F8VRH5 84 aa16.94■□□□□ 0.3
VPS16-201ENST00000380443 M0R2P5 195 aa16.94■□□□□ 0.3
VPS16-201ENST00000380443 MPV17L2Q567V2 206 aa16.94■□□□□ 0.3
VPS16-201ENST00000380443 SPXQ9BT56 116 aa16.94■□□□□ 0.3
VPS16-201ENST00000380443 MRPL35Q9NZE8 188 aaKnown RBP16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms