RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 DEFB127Q9H1M4 99 aa7.15□□□□□ -1.26
PTPRA-204ENST00000380393 SERP1Q9Y6X1 66 aa7.15□□□□□ -1.26
PTPRA-204ENST00000380393 COL6A6A6NMZ7 2263 aa7.15□□□□□ -1.26
PTPRA-204ENST00000380393 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.15□□□□□ -1.27
PTPRA-204ENST00000380393 FAM201AQ5SY85 155 aa7.15□□□□□ -1.27
PTPRA-204ENST00000380393 SDIM1Q6ZPB5 146 aa7.15□□□□□ -1.27
PTPRA-204ENST00000380393 FAM19A1Q7Z5A9 133 aa7.15□□□□□ -1.27
PTPRA-204ENST00000380393 ZNF71Q9NQZ8 489 aaPredicted RBP7.15□□□□□ -1.27
PTPRA-204ENST00000380393 C9orf139Q6ZV77 190 aa7.14□□□□□ -1.27
PTPRA-204ENST00000380393 FAM223AQ8IWN6 122 aa7.14□□□□□ -1.27
PTPRA-204ENST00000380393 TMEM75Q8N9X5 138 aa7.14□□□□□ -1.27
PTPRA-204ENST00000380393 KLF14Q8TD94 323 aaPredicted RBP7.14□□□□□ -1.27
PTPRA-204ENST00000380393 IGKV1D-37A0A075B6S9 117 aa7.14□□□□□ -1.27
PTPRA-204ENST00000380393 PRSS2P07478 247 aa7.14□□□□□ -1.27
PTPRA-204ENST00000380393 C16orf95Q9H693 158 aa7.14□□□□□ -1.27
PTPRA-204ENST00000380393 SSUH2Q9Y2M2 353 aa7.14□□□□□ -1.27
PTPRA-204ENST00000380393 PCNX1Q96RV3 2341 aa7.14□□□□□ -1.27
PTPRA-204ENST00000380393 TRBV6-1A0A0K0K1D8 114 aa7.14□□□□□ -1.27
PTPRA-204ENST00000380393 CCL21O00585 134 aa7.14□□□□□ -1.27
PTPRA-204ENST00000380393 HOXB4P17483 251 aaPredicted RBP7.14□□□□□ -1.27
PTPRA-204ENST00000380393 ERHP84090 104 aaKnown RBP7.14□□□□□ -1.27
PTPRA-204ENST00000380393 MUSTN1Q8IVN3 82 aa7.14□□□□□ -1.27
PTPRA-204ENST00000380393 ICOSQ9Y6W8 199 aa7.14□□□□□ -1.27
PTPRA-204ENST00000380393 ZNF561-AS1K7EIQ3 104 aa7.13□□□□□ -1.27
PTPRA-204ENST00000380393 IGKV1-16P04430 117 aa7.13□□□□□ -1.27
PTPRA-204ENST00000380393 SAA2P0DJI9 122 aaPredicted RBP7.13□□□□□ -1.27
PTPRA-204ENST00000380393 PRRC2AP48634 2157 aaKnown RBP7.13□□□□□ -1.27
PTPRA-204ENST00000380393 TMEM223A0PJW6 202 aa7.13□□□□□ -1.27
PTPRA-204ENST00000380393 NDUFC2-KCTD14E9PQ53 114 aa7.13□□□□□ -1.27
PTPRA-204ENST00000380393 SS18L1O75177 396 aaPredicted RBP7.13□□□□□ -1.27
PTPRA-204ENST00000380393 CNEP1R1Q8N9A8 125 aa7.13□□□□□ -1.27
PTPRA-204ENST00000380393 FDCSPQ8NFU4 85 aa7.13□□□□□ -1.27
PTPRA-204ENST00000380393 TMEM190Q8WZ59 177 aa7.13□□□□□ -1.27
PTPRA-204ENST00000380393 DYNLRB1Q9NP97 96 aa7.13□□□□□ -1.27
PTPRA-204ENST00000380393 MRPL36Q9P0J6 103 aaKnown RBP7.13□□□□□ -1.27
PTPRA-204ENST00000380393 CACNA1AO00555 2505 aa7.13□□□□□ -1.27
PTPRA-204ENST00000380393 SMIM26A0A096LP01 95 aa7.13□□□□□ -1.27
PTPRA-204ENST00000380393 C10orf55Q5SWW7 151 aa7.13□□□□□ -1.27
PTPRA-204ENST00000380393 TMEM200BQ69YZ2 307 aa7.13□□□□□ -1.27
PTPRA-204ENST00000380393 NRACQ8N912 160 aa7.13□□□□□ -1.27
PTPRA-204ENST00000380393 UBE2E1P51965 193 aa7.12□□□□□ -1.27
PTPRA-204ENST00000380393 TSPEAR-AS2P59090 65 aa7.12□□□□□ -1.27
PTPRA-204ENST00000380393 PMAIP1Q13794 54 aa7.12□□□□□ -1.27
PTPRA-204ENST00000380393 UPK2O00526 184 aa7.12□□□□□ -1.27
PTPRA-204ENST00000380393 LGALS3P17931 250 aaKnown RBP7.12□□□□□ -1.27
PTPRA-204ENST00000380393 PKD1L2Q7Z442 2459 aa7.12□□□□□ -1.27
PTPRA-204ENST00000380393 TRAV26-2A0A0B4J265 109 aa7.12□□□□□ -1.27
PTPRA-204ENST00000380393 USP17L23D6RBM5 183 aa7.12□□□□□ -1.27
PTPRA-204ENST00000380393 LST1O00453 97 aa7.12□□□□□ -1.27
PTPRA-204ENST00000380393 SUB1P53999 127 aaKnown RBP eCLIP7.12□□□□□ -1.27
PTPRA-204ENST00000380393 DLX1P56177 255 aa7.12□□□□□ -1.27
PTPRA-204ENST00000380393 RNF182Q8N6D2 247 aa7.12□□□□□ -1.27
PTPRA-204ENST00000380393 NUP37Q8NFH4 326 aa7.12□□□□□ -1.27
PTPRA-204ENST00000380393 EPG5Q9HCE0 2579 aa7.11□□□□□ -1.27
PTPRA-204ENST00000380393 A0A087WVE0 104 aa7.11□□□□□ -1.27
PTPRA-204ENST00000380393 IGKV3D-7A0A0C4DH55 119 aa7.11□□□□□ -1.27
PTPRA-204ENST00000380393 C11orf86A6NJI1 115 aa7.11□□□□□ -1.27
PTPRA-204ENST00000380393 EGR2P11161 476 aaPredicted RBP7.11□□□□□ -1.27
PTPRA-204ENST00000380393 HCP5Q6MZN7 132 aa7.11□□□□□ -1.27
PTPRA-204ENST00000380393 FP248Q71RG6 208 aaPredicted RBP7.11□□□□□ -1.27
PTPRA-204ENST00000380393 TIMM21Q9BVV7 248 aa7.11□□□□□ -1.27
PTPRA-204ENST00000380393 CXXC4Q9H2H0 198 aa7.11□□□□□ -1.27
PTPRA-204ENST00000380393 IGKV3D-15A0A087WSY6 115 aa7.11□□□□□ -1.27
PTPRA-204ENST00000380393 THAP8Q8NA92 274 aa7.11□□□□□ -1.27
PTPRA-204ENST00000380393 Q96MF0 132 aa7.11□□□□□ -1.27
PTPRA-204ENST00000380393 KNCNA6PVL3 124 aa7.1□□□□□ -1.27
PTPRA-204ENST00000380393 ERCC8Q13216 396 aa7.1□□□□□ -1.27
PTPRA-204ENST00000380393 TRAV12-3A0A0B4J271 114 aa7.1□□□□□ -1.27
PTPRA-204ENST00000380393 DAZ4Q86SG3 579 aaKnown RBP7.1□□□□□ -1.27
PTPRA-204ENST00000380393 SLC50A1Q9BRV3 221 aa7.1□□□□□ -1.27
PTPRA-204ENST00000380393 TTTY12Q9BZ98 90 aa7.1□□□□□ -1.27
PTPRA-204ENST00000380393 DAZ1Q9NQZ3 744 aaKnown RBP7.1□□□□□ -1.27
PTPRA-204ENST00000380393 EPM2AB3EWF7 344 aa7.09□□□□□ -1.27
PTPRA-204ENST00000380393 SAA1P0DJI8 122 aaPredicted RBP7.09□□□□□ -1.27
PTPRA-204ENST00000380393 LYZP61626 148 aa7.09□□□□□ -1.27
PTPRA-204ENST00000380393 DCANP1Q8TF63 244 aa7.09□□□□□ -1.27
PTPRA-204ENST00000380393 CACNA1BQ00975 2339 aa7.09□□□□□ -1.27
PTPRA-204ENST00000380393 SPRY3O43610 288 aa7.09□□□□□ -1.27
PTPRA-204ENST00000380393 FAM223BA6NKX1 122 aa7.09□□□□□ -1.27
PTPRA-204ENST00000380393 E7EUB6 86 aa7.09□□□□□ -1.27
PTPRA-204ENST00000380393 C20orf197Q8N268 126 aa7.09□□□□□ -1.27
PTPRA-204ENST00000380393 DSCAMO60469 2012 aa7.08□□□□□ -1.28
PTPRA-204ENST00000380393 IGKV1D-17A0A075B6S4 117 aa7.08□□□□□ -1.28
PTPRA-204ENST00000380393 ORMDL2Q53FV1 153 aa7.08□□□□□ -1.28
PTPRA-204ENST00000380393 FAM216BQ8N7L0 139 aa7.08□□□□□ -1.28
PTPRA-204ENST00000380393 TOMM6Q96B49 74 aa7.08□□□□□ -1.28
PTPRA-204ENST00000380393 LOXP28300 417 aaPredicted RBP7.08□□□□□ -1.28
PTPRA-204ENST00000380393 PLGLAQ15195 96 aa7.08□□□□□ -1.28
PTPRA-204ENST00000380393 SS18Q15532 418 aa7.08□□□□□ -1.28
PTPRA-204ENST00000380393 C2orf66Q6UXQ4 117 aa7.08□□□□□ -1.28
PTPRA-204ENST00000380393 SPTAN1Q13813 2472 aaKnown RBP7.08□□□□□ -1.28
PTPRA-204ENST00000380393 GFRALQ6UXV0 394 aa7.08□□□□□ -1.28
PTPRA-204ENST00000380393 SMIM2Q9BVW6 85 aa7.08□□□□□ -1.28
PTPRA-204ENST00000380393 TRGV3P03979 118 aa7.07□□□□□ -1.28
PTPRA-204ENST00000380393 PAPPA-AS1Q5QFB9 102 aa7.07□□□□□ -1.28
PTPRA-204ENST00000380393 IGHV3-72A0A0B4J1Y9 119 aa7.07□□□□□ -1.28
PTPRA-204ENST00000380393 DYNAPQ8N1N2 210 aa7.07□□□□□ -1.28
PTPRA-204ENST00000380393 LINC00474Q9P2X8 69 aa7.07□□□□□ -1.28
PTPRA-204ENST00000380393 I3L3M4 83 aa7.07□□□□□ -1.28
PTPRA-204ENST00000380393 DAZ2Q13117 558 aaKnown RBP7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms