RNA–Protein interactions for RNA: ENST00000380265.9

HERC6-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HERC6, Length 3,781 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-203ENST00000380265 CRLF1O75462 422 aa9.26□□□□□ -0.93
HERC6-203ENST00000380265 TNRC18O15417 2968 aaPredicted RBP9.26□□□□□ -0.93
HERC6-203ENST00000380265 USP9YO00507 2555 aaPredicted RBP9.25□□□□□ -0.93
HERC6-203ENST00000380265 IGHV7-81A0A0B4J1V7 117 aa9.25□□□□□ -0.93
HERC6-203ENST00000380265 IGHV3-30P01768 117 aa9.25□□□□□ -0.93
HERC6-203ENST00000380265 IGHV3-30-5P0DP03 117 aa9.25□□□□□ -0.93
HERC6-203ENST00000380265 TSPEAR-AS2P59090 65 aa9.25□□□□□ -0.93
HERC6-203ENST00000380265 VMO1Q7Z5L0 202 aa9.25□□□□□ -0.93
HERC6-203ENST00000380265 C15orf53Q8NAA6 179 aa9.25□□□□□ -0.93
HERC6-203ENST00000380265 COX6B1P14854 86 aa9.25□□□□□ -0.93
HERC6-203ENST00000380265 SPENQ96T58 3664 aaKnown RBP9.25□□□□□ -0.93
HERC6-203ENST00000380265 TEX49A0A1B0GTD5 131 aa9.25□□□□□ -0.93
HERC6-203ENST00000380265 Q8N1Y9 231 aa9.25□□□□□ -0.93
HERC6-203ENST00000380265 PSMG3-AS1Q96PY0 264 aa9.25□□□□□ -0.93
HERC6-203ENST00000380265 F6UB75 175 aa9.24□□□□□ -0.93
HERC6-203ENST00000380265 ATP6V0E1O15342 81 aa9.24□□□□□ -0.93
HERC6-203ENST00000380265 ADARB2-AS1A8MUL3 147 aa9.24□□□□□ -0.93
HERC6-203ENST00000380265 ZFAND3Q9H8U3 227 aa9.24□□□□□ -0.93
HERC6-203ENST00000380265 NPC2P61916 151 aa9.24□□□□□ -0.93
HERC6-203ENST00000380265 PLA2G2CQ5R387 149 aa9.24□□□□□ -0.93
HERC6-203ENST00000380265 FAM159AQ6UWV7 190 aa9.24□□□□□ -0.93
HERC6-203ENST00000380265 SLC25A29Q8N8R3 303 aa9.24□□□□□ -0.93
HERC6-203ENST00000380265 JPT2Q9H910 190 aa9.24□□□□□ -0.93
HERC6-203ENST00000380265 EEF1AKMT3Q96AZ1 226 aa9.23□□□□□ -0.93
HERC6-203ENST00000380265 OPRPNQ99935 248 aaPredicted RBP9.23□□□□□ -0.93
HERC6-203ENST00000380265 TRBV7-9A0A0J9YWB2 115 aa9.23□□□□□ -0.93
HERC6-203ENST00000380265 RHODO00212 210 aa9.23□□□□□ -0.93
HERC6-203ENST00000380265 CRYGDP07320 174 aa9.23□□□□□ -0.93
HERC6-203ENST00000380265 ATXN8Q156A1 80 aa9.23□□□□□ -0.93
HERC6-203ENST00000380265 HIVEP3Q5T1R4 2406 aa9.23□□□□□ -0.93
HERC6-203ENST00000380265 PPP1R17O96001 155 aa9.23□□□□□ -0.93
HERC6-203ENST00000380265 C9orf47Q6ZRZ4 202 aa9.23□□□□□ -0.93
HERC6-203ENST00000380265 MUSTN1Q8IVN3 82 aa9.23□□□□□ -0.93
HERC6-203ENST00000380265 C2orf82Q6UX34 121 aa9.22□□□□□ -0.93
HERC6-203ENST00000380265 IGLV4-69A0A075B6H9 119 aa9.22□□□□□ -0.93
HERC6-203ENST00000380265 LINC01620Q4KN68 170 aa9.22□□□□□ -0.93
HERC6-203ENST00000380265 ATMQ13315 3056 aa9.22□□□□□ -0.93
HERC6-203ENST00000380265 IGHV4-4A0A075B6R2 117 aa9.22□□□□□ -0.93
HERC6-203ENST00000380265 NHLRC4P0CG21 123 aaPredicted RBP9.22□□□□□ -0.93
HERC6-203ENST00000380265 SDHAF1A6NFY7 115 aa9.21□□□□□ -0.93
HERC6-203ENST00000380265 SRD5A1P18405 259 aa9.21□□□□□ -0.93
HERC6-203ENST00000380265 CLPSL1A2RUU4 121 aa9.21□□□□□ -0.94
HERC6-203ENST00000380265 H3BMM0 161 aa9.21□□□□□ -0.94
HERC6-203ENST00000380265 IGHV3-33P01772 117 aa9.21□□□□□ -0.94
HERC6-203ENST00000380265 UBE2WQ96B02 151 aa9.21□□□□□ -0.94
HERC6-203ENST00000380265 C20orf173Q96LM9 149 aa9.21□□□□□ -0.94
HERC6-203ENST00000380265 CCDC140Q96MF4 163 aa9.21□□□□□ -0.94
HERC6-203ENST00000380265 LAMA5O15230 3695 aa9.21□□□□□ -0.94
HERC6-203ENST00000380265 NAV2Q8IVL1 2488 aa9.21□□□□□ -0.94
HERC6-203ENST00000380265 ZNF56Q15929 161 aa9.21□□□□□ -0.94
HERC6-203ENST00000380265 ZNRF2Q8NHG8 242 aa9.21□□□□□ -0.94
HERC6-203ENST00000380265 FAM110DQ8TAY7 271 aaPredicted RBP9.21□□□□□ -0.94
HERC6-203ENST00000380265 VCYO14598 125 aa9.2□□□□□ -0.94
HERC6-203ENST00000380265 TSHBP01222 138 aa9.2□□□□□ -0.94
HERC6-203ENST00000380265 MEIG1Q5JSS6 88 aa9.2□□□□□ -0.94
HERC6-203ENST00000380265 C9orf139Q6ZV77 190 aa9.2□□□□□ -0.94
HERC6-203ENST00000380265 LINC00477Q96M19 166 aa9.2□□□□□ -0.94
HERC6-203ENST00000380265 Q8N9W7 124 aa9.2□□□□□ -0.94
HERC6-203ENST00000380265 RPL32P62910 135 aaKnown RBP9.19□□□□□ -0.94
HERC6-203ENST00000380265 ABCA12Q86UK0 2595 aa9.19□□□□□ -0.94
HERC6-203ENST00000380265 IGKV3-20P01619 116 aa9.19□□□□□ -0.94
HERC6-203ENST00000380265 ELANEP08246 267 aa9.19□□□□□ -0.94
HERC6-203ENST00000380265 SBSPONQ8IVN8 264 aa9.19□□□□□ -0.94
HERC6-203ENST00000380265 SPXQ9BT56 116 aa9.19□□□□□ -0.94
HERC6-203ENST00000380265 IGFL3Q6UXB1 125 aa9.19□□□□□ -0.94
HERC6-203ENST00000380265 ZFAND2AQ8N6M9 145 aa9.19□□□□□ -0.94
HERC6-203ENST00000380265 DMXL1Q9Y485 3027 aa9.19□□□□□ -0.94
HERC6-203ENST00000380265 MAP1AP78559 2803 aaPredicted RBP9.18□□□□□ -0.94
HERC6-203ENST00000380265 IGHV3-11P01762 117 aa9.18□□□□□ -0.94
HERC6-203ENST00000380265 SUMO4Q6EEV6 95 aa9.18□□□□□ -0.94
HERC6-203ENST00000380265 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.18□□□□□ -0.94
HERC6-203ENST00000380265 IGHV1-69DA0A0B4J2H0 117 aa9.18□□□□□ -0.94
HERC6-203ENST00000380265 COX6CP09669 75 aa9.18□□□□□ -0.94
HERC6-203ENST00000380265 TMEM219Q86XT9 240 aa9.18□□□□□ -0.94
HERC6-203ENST00000380265 TMEM141Q96I45 108 aa9.18□□□□□ -0.94
HERC6-203ENST00000380265 MRPL53Q96EL3 112 aaKnown RBP9.18□□□□□ -0.94
HERC6-203ENST00000380265 IGIPA6NJ69 53 aa9.17□□□□□ -0.94
HERC6-203ENST00000380265 PRR30Q53SZ7 412 aaPredicted RBP9.17□□□□□ -0.94
HERC6-203ENST00000380265 GPHB5Q86YW7 130 aa9.17□□□□□ -0.94
HERC6-203ENST00000380265 DUX3Q96PT4 197 aa9.17□□□□□ -0.94
HERC6-203ENST00000380265 SORL1Q92673 2214 aa9.17□□□□□ -0.94
HERC6-203ENST00000380265 M0R1W7 72 aa9.17□□□□□ -0.94
HERC6-203ENST00000380265 LY6G5BQ8NDX9 201 aa9.17□□□□□ -0.94
HERC6-203ENST00000380265 A0A0J9YXV3 536 aa9.17□□□□□ -0.94
HERC6-203ENST00000380265 OVOL1O14753 267 aa9.17□□□□□ -0.94
HERC6-203ENST00000380265 IGHV3OR16-10A0A075B7F0 116 aa9.16□□□□□ -0.94
HERC6-203ENST00000380265 TRAV12-3A0A0B4J271 114 aa9.16□□□□□ -0.94
HERC6-203ENST00000380265 ID1P41134 155 aa9.16□□□□□ -0.94
HERC6-203ENST00000380265 TMEM263Q8WUH6 116 aaKnown RBP9.16□□□□□ -0.94
HERC6-203ENST00000380265 ZNF580Q9UK33 172 aa9.16□□□□□ -0.94
HERC6-203ENST00000380265 ODF3BA8MYP8 253 aa9.16□□□□□ -0.94
HERC6-203ENST00000380265 RNASE3P12724 160 aaKnown RBP9.16□□□□□ -0.94
HERC6-203ENST00000380265 GRNP28799 593 aaKnown RBP9.16□□□□□ -0.94
HERC6-203ENST00000380265 RNF223E7ERA6 249 aa9.16□□□□□ -0.94
HERC6-203ENST00000380265 TRIAP1O43715 76 aa9.16□□□□□ -0.94
HERC6-203ENST00000380265 CHCHD5Q9BSY4 110 aa9.16□□□□□ -0.94
HERC6-203ENST00000380265 USP9XQ93008 2570 aaPredicted RBP9.15□□□□□ -0.94
HERC6-203ENST00000380265 TRBV10-2A0A0K0K1G8 114 aa9.15□□□□□ -0.94
HERC6-203ENST00000380265 M0R2P5 195 aa9.15□□□□□ -0.94
HERC6-203ENST00000380265 UNQ9165/PRO28630Q6UXU0 137 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms