RNA–Protein interactions for RNA: ENST00000379440.8

PRNP-201, Transcript of prion protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRNP, Length 2,657 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRNP-201ENST00000379440 FAM19A4Q96LR4 140 aa11.17□□□□□ -0.62
PRNP-201ENST00000379440 A0A087WX48 190 aa11.16□□□□□ -0.62
PRNP-201ENST00000379440 WIPF1O43516 503 aa11.16□□□□□ -0.62
PRNP-201ENST00000379440 ELANEP08246 267 aa11.16□□□□□ -0.62
PRNP-201ENST00000379440 LGALS1P09382 135 aaKnown RBP11.16□□□□□ -0.62
PRNP-201ENST00000379440 MAP1LC3CQ9BXW4 147 aa11.16□□□□□ -0.62
PRNP-201ENST00000379440 PPDPFQ9H3Y8 114 aa11.16□□□□□ -0.62
PRNP-201ENST00000379440 ITPR3Q14573 2671 aa11.16□□□□□ -0.62
PRNP-201ENST00000379440 MT-ATP8P03928 68 aa11.16□□□□□ -0.62
PRNP-201ENST00000379440 C18orf65Q6ZTR6 163 aa11.16□□□□□ -0.62
PRNP-201ENST00000379440 MYOZ3Q8TDC0 251 aa11.16□□□□□ -0.62
PRNP-201ENST00000379440 TRAV21A0A0B4J279 112 aa11.15□□□□□ -0.62
PRNP-201ENST00000379440 ETDBQ3ZM63 59 aa11.15□□□□□ -0.62
PRNP-201ENST00000379440 SPANXN1Q5VSR9 72 aa11.15□□□□□ -0.62
PRNP-201ENST00000379440 ZNF747Q9BV97 191 aa11.15□□□□□ -0.62
PRNP-201ENST00000379440 HOXD3P31249 432 aaPredicted RBP11.14□□□□□ -0.63
PRNP-201ENST00000379440 ANXA2RQ3ZCQ2 193 aa11.14□□□□□ -0.63
PRNP-201ENST00000379440 HIST2H2BDQ6DRA6 164 aa11.14□□□□□ -0.63
PRNP-201ENST00000379440 SH2D6Q7Z4S9 175 aa11.14□□□□□ -0.63
PRNP-201ENST00000379440 UBE2E2Q96LR5 201 aa11.14□□□□□ -0.63
PRNP-201ENST00000379440 ZNF688P0C7X2 276 aa11.14□□□□□ -0.63
PRNP-201ENST00000379440 DEFB136Q30KP8 78 aa11.14□□□□□ -0.63
PRNP-201ENST00000379440 CSDC2Q9Y534 153 aaKnown RBP11.14□□□□□ -0.63
PRNP-201ENST00000379440 CCDC168Q8NDH2 2452 aa11.14□□□□□ -0.63
PRNP-201ENST00000379440 TRAV26-2A0A0B4J265 109 aa11.13□□□□□ -0.63
PRNP-201ENST00000379440 TNFRSF6BO95407 300 aa11.13□□□□□ -0.63
PRNP-201ENST00000379440 ZFAND6Q6FIF0 208 aa11.13□□□□□ -0.63
PRNP-201ENST00000379440 GNRH2O43555 120 aa11.13□□□□□ -0.63
PRNP-201ENST00000379440 Q6ZUT4 128 aa11.13□□□□□ -0.63
PRNP-201ENST00000379440 SYT8Q8NBV8 401 aa11.13□□□□□ -0.63
PRNP-201ENST00000379440 C20orf78Q9BR46 151 aa11.13□□□□□ -0.63
PRNP-201ENST00000379440 TM2D2Q9BX73 214 aa11.13□□□□□ -0.63
PRNP-201ENST00000379440 SPANXA1Q9NS26 97 aa11.13□□□□□ -0.63
PRNP-201ENST00000379440 SONP18583 2426 aaKnown RBP11.13□□□□□ -0.63
PRNP-201ENST00000379440 PSMG4Q5JS54 123 aa11.12□□□□□ -0.63
PRNP-201ENST00000379440 TEX29Q8N6K0 151 aa11.12□□□□□ -0.63
PRNP-201ENST00000379440 CDIP1Q9H305 208 aa11.12□□□□□ -0.63
PRNP-201ENST00000379440 IGHV4-4A0A075B6R2 117 aa11.12□□□□□ -0.63
PRNP-201ENST00000379440 M0R381 172 aa11.12□□□□□ -0.63
PRNP-201ENST00000379440 S100A4P26447 101 aaKnown RBP11.12□□□□□ -0.63
PRNP-201ENST00000379440 APRG1Q8IVJ8 170 aa11.12□□□□□ -0.63
PRNP-201ENST00000379440 MAP1LC3AQ9H492 121 aa11.12□□□□□ -0.63
PRNP-201ENST00000379440 RNF152Q8N8N0 203 aa11.12□□□□□ -0.63
PRNP-201ENST00000379440 IGKV3-20P01619 116 aa11.11□□□□□ -0.63
PRNP-201ENST00000379440 SMIM13P0DJ93 91 aa11.11□□□□□ -0.63
PRNP-201ENST00000379440 SLURP1P55000 103 aa11.11□□□□□ -0.63
PRNP-201ENST00000379440 CACNG7P62955 275 aa11.11□□□□□ -0.63
PRNP-201ENST00000379440 CUBNO60494 3623 aa11.11□□□□□ -0.63
PRNP-201ENST00000379440 PLA2G2AP14555 144 aa11.11□□□□□ -0.63
PRNP-201ENST00000379440 Q8N2B8 174 aa11.11□□□□□ -0.63
PRNP-201ENST00000379440 DUX3Q96PT4 197 aa11.11□□□□□ -0.63
PRNP-201ENST00000379440 LGALS9O00182 355 aa11.1□□□□□ -0.63
PRNP-201ENST00000379440 ASIPP42127 132 aa11.1□□□□□ -0.63
PRNP-201ENST00000379440 MYO9AB2RTY4 2548 aa11.1□□□□□ -0.63
PRNP-201ENST00000379440 KLLNB2CW77 178 aa11.1□□□□□ -0.63
PRNP-201ENST00000379440 F8WDY8 70 aa11.1□□□□□ -0.63
PRNP-201ENST00000379440 K7EQG2 157 aa11.1□□□□□ -0.63
PRNP-201ENST00000379440 HBDP02042 147 aa11.1□□□□□ -0.63
PRNP-201ENST00000379440 INSL3P51460 131 aa11.1□□□□□ -0.63
PRNP-201ENST00000379440 LINC01545Q5VT33 79 aa11.1□□□□□ -0.63
PRNP-201ENST00000379440 FLNAP21333 2647 aaKnown RBP11.09□□□□□ -0.63
PRNP-201ENST00000379440 NHLRC4P0CG21 123 aaPredicted RBP11.09□□□□□ -0.63
PRNP-201ENST00000379440 XGP55808 180 aa11.09□□□□□ -0.63
PRNP-201ENST00000379440 RNASE3P12724 160 aaKnown RBP11.09□□□□□ -0.63
PRNP-201ENST00000379440 PHLDA3Q9Y5J5 127 aa11.09□□□□□ -0.63
PRNP-201ENST00000379440 SORL1Q92673 2214 aa11.08□□□□□ -0.64
PRNP-201ENST00000379440 AKAP9Q99996 3911 aa11.08□□□□□ -0.64
PRNP-201ENST00000379440 TRAV12-3A0A0B4J271 114 aa11.08□□□□□ -0.64
PRNP-201ENST00000379440 SNRPD3P62318 126 aaKnown RBP11.08□□□□□ -0.64
PRNP-201ENST00000379440 NRACQ8N912 160 aa11.08□□□□□ -0.64
PRNP-201ENST00000379440 CCDC179H3BU77 68 aa11.08□□□□□ -0.64
PRNP-201ENST00000379440 J3QKU1 62 aa11.08□□□□□ -0.64
PRNP-201ENST00000379440 KHDC1LQ5JSQ8 128 aa11.08□□□□□ -0.64
PRNP-201ENST00000379440 PDZD2O15018 2839 aa11.08□□□□□ -0.64
PRNP-201ENST00000379440 AGRNO00468 2067 aa11.07□□□□□ -0.64
PRNP-201ENST00000379440 TRAV12-2A0A075B6T6 113 aa11.07□□□□□ -0.64
PRNP-201ENST00000379440 A0A0J9YX75 114 aa11.07□□□□□ -0.64
PRNP-201ENST00000379440 FGF6P10767 208 aa11.07□□□□□ -0.64
PRNP-201ENST00000379440 LEPP41159 167 aa11.07□□□□□ -0.64
PRNP-201ENST00000379440 C14orf178Q8N769 122 aaPredicted RBP11.07□□□□□ -0.64
PRNP-201ENST00000379440 C18orf15Q96N68 181 aa11.07□□□□□ -0.64
PRNP-201ENST00000379440 NXT2Q9NPJ8 142 aaKnown RBP11.07□□□□□ -0.64
PRNP-201ENST00000379440 KMT2BQ9UMN6 2715 aaPredicted RBP11.07□□□□□ -0.64
PRNP-201ENST00000379440 APOMO95445 188 aa11.06□□□□□ -0.64
PRNP-201ENST00000379440 GAGE13Q4V321 117 aa11.06□□□□□ -0.64
PRNP-201ENST00000379440 OR9G4Q8NGQ1 327 aa11.06□□□□□ -0.64
PRNP-201ENST00000379440 IGLV2-18A0A075B6J9 118 aa11.06□□□□□ -0.64
PRNP-201ENST00000379440 LINC01546A6NGU7 62 aa11.06□□□□□ -0.64
PRNP-201ENST00000379440 PRSS29PA6NIE9 313 aa11.06□□□□□ -0.64
PRNP-201ENST00000379440 FOXI1Q12951 378 aa11.06□□□□□ -0.64
PRNP-201ENST00000379440 FAM159AQ6UWV7 190 aa11.06□□□□□ -0.64
PRNP-201ENST00000379440 Q6ZSV7 163 aa11.06□□□□□ -0.64
PRNP-201ENST00000379440 Q8N8P6 123 aa11.05□□□□□ -0.64
PRNP-201ENST00000379440 IFI27L1Q96BM0 104 aa11.05□□□□□ -0.64
PRNP-201ENST00000379440 DNAJC9-AS1A6NH13 148 aa11.05□□□□□ -0.64
PRNP-201ENST00000379440 LINC01619G3V211 115 aa11.05□□□□□ -0.64
PRNP-201ENST00000379440 HELZ2Q9BYK8 2649 aaKnown RBP11.05□□□□□ -0.64
PRNP-201ENST00000379440 FCER1GP30273 86 aa11.04□□□□□ -0.64
PRNP-201ENST00000379440 MUC4Q99102 2169 aa11.04□□□□□ -0.64
PRNP-201ENST00000379440 SMIM9A6NGZ8 99 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms