RNA–Protein interactions for RNA: ENST00000379433.5

NEDD9-201, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 1 (best) BASIC

Gene NEDD9, Length 3,341 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-201ENST00000379433 MSRB1Q9NZV6 116 aa8.25□□□□□ -1.09
NEDD9-201ENST00000379433 RNF114Q9Y508 228 aa8.25□□□□□ -1.09
NEDD9-201ENST00000379433 CRYGDP07320 174 aa8.24□□□□□ -1.09
NEDD9-201ENST00000379433 TWIST1Q15672 202 aa8.24□□□□□ -1.09
NEDD9-201ENST00000379433 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.24□□□□□ -1.09
NEDD9-201ENST00000379433 SPANXB1Q9NS25 103 aaPredicted RBP8.24□□□□□ -1.09
NEDD9-201ENST00000379433 C9orf118A6NHY6 69 aa8.24□□□□□ -1.09
NEDD9-201ENST00000379433 IGHV4-31P0DP07 118 aa8.24□□□□□ -1.09
NEDD9-201ENST00000379433 KIR3DS1Q14943 382 aa8.24□□□□□ -1.09
NEDD9-201ENST00000379433 FAM19A1Q7Z5A9 133 aa8.24□□□□□ -1.09
NEDD9-201ENST00000379433 RAB37Q96AX2 223 aa8.24□□□□□ -1.09
NEDD9-201ENST00000379433 MBD6Q96DN6 1003 aa8.24□□□□□ -1.09
NEDD9-201ENST00000379433 PRR25Q96S07 402 aa8.24□□□□□ -1.09
NEDD9-201ENST00000379433 HAX1O00165 279 aa8.24□□□□□ -1.09
NEDD9-201ENST00000379433 NCR2O95944 276 aa8.24□□□□□ -1.09
NEDD9-201ENST00000379433 IGHG2P01859 326 aa8.24□□□□□ -1.09
NEDD9-201ENST00000379433 HTN1P15515 57 aa8.24□□□□□ -1.09
NEDD9-201ENST00000379433 JPT2Q9H910 190 aa8.24□□□□□ -1.09
NEDD9-201ENST00000379433 A0A1B0GX51 115 aa8.23□□□□□ -1.09
NEDD9-201ENST00000379433 C19orf71A6NCJ1 209 aa8.23□□□□□ -1.09
NEDD9-201ENST00000379433 OXTP01178 125 aa8.23□□□□□ -1.09
NEDD9-201ENST00000379433 IGHG4P01861 327 aa8.23□□□□□ -1.09
NEDD9-201ENST00000379433 SYNJ2BPP57105 145 aa8.23□□□□□ -1.09
NEDD9-201ENST00000379433 C18orf65Q6ZTR6 163 aa8.23□□□□□ -1.09
NEDD9-201ENST00000379433 RHPN1-AS1Q9BWJ2 59 aa8.23□□□□□ -1.09
NEDD9-201ENST00000379433 APRG1Q8IVJ8 170 aa8.23□□□□□ -1.09
NEDD9-201ENST00000379433 C18orf32Q8TCD1 76 aa8.23□□□□□ -1.09
NEDD9-201ENST00000379433 KIR2DL4Q99706 377 aa8.23□□□□□ -1.09
NEDD9-201ENST00000379433 PMCHL2Q9BQD1 86 aa8.23□□□□□ -1.09
NEDD9-201ENST00000379433 AGPAT4-IT1Q9H0P7 198 aa8.23□□□□□ -1.09
NEDD9-201ENST00000379433 A0A1B0GUT8 65 aa8.23□□□□□ -1.09
NEDD9-201ENST00000379433 A0A1W2PS18 150 aa8.23□□□□□ -1.09
NEDD9-201ENST00000379433 AMN1Q8IY45 258 aa8.23□□□□□ -1.09
NEDD9-201ENST00000379433 BORCS7Q96B45 105 aa8.23□□□□□ -1.09
NEDD9-201ENST00000379433 DSCR9P59020 149 aa8.22□□□□□ -1.09
NEDD9-201ENST00000379433 WFDC2Q14508 124 aa8.22□□□□□ -1.09
NEDD9-201ENST00000379433 CDIP1Q9H305 208 aa8.22□□□□□ -1.09
NEDD9-201ENST00000379433 CR1P17927 2039 aa8.22□□□□□ -1.09
NEDD9-201ENST00000379433 ZNF688P0C7X2 276 aa8.21□□□□□ -1.09
NEDD9-201ENST00000379433 INSL3P51460 131 aa8.21□□□□□ -1.09
NEDD9-201ENST00000379433 PDE6HQ13956 83 aa8.21□□□□□ -1.09
NEDD9-201ENST00000379433 PRSS22Q9GZN4 317 aa8.21□□□□□ -1.09
NEDD9-201ENST00000379433 HERVK_113P63121 156 aa8.21□□□□□ -1.1
NEDD9-201ENST00000379433 C9orf153Q5TBE3 101 aa8.21□□□□□ -1.1
NEDD9-201ENST00000379433 LINC01561Q8N1V8 128 aa8.21□□□□□ -1.1
NEDD9-201ENST00000379433 FAM223BA6NKX1 122 aa8.21□□□□□ -1.1
NEDD9-201ENST00000379433 FAM223AQ8IWN6 122 aa8.21□□□□□ -1.1
NEDD9-201ENST00000379433 LYPD1Q8N2G4 141 aa8.21□□□□□ -1.1
NEDD9-201ENST00000379433 SMR3AQ99954 134 aa8.21□□□□□ -1.1
NEDD9-201ENST00000379433 ATRQ13535 2644 aa8.2□□□□□ -1.1
NEDD9-201ENST00000379433 OTOGQ6ZRI0 2925 aa8.2□□□□□ -1.1
NEDD9-201ENST00000379433 TP53TG1Q9Y2A0 90 aa8.2□□□□□ -1.1
NEDD9-201ENST00000379433 TRAV8-2A0A0B4J237 113 aa8.2□□□□□ -1.1
NEDD9-201ENST00000379433 LINC00173Q6ZV60 143 aa8.2□□□□□ -1.1
NEDD9-201ENST00000379433 TRAV9-1A0A075B6T8 112 aa8.19□□□□□ -1.1
NEDD9-201ENST00000379433 GPX1P07203 203 aa8.19□□□□□ -1.1
NEDD9-201ENST00000379433 VPREB1P12018 145 aa8.19□□□□□ -1.1
NEDD9-201ENST00000379433 RNASE4P34096 147 aaKnown RBP8.19□□□□□ -1.1
NEDD9-201ENST00000379433 RPS28P62857 69 aaKnown RBP8.19□□□□□ -1.1
NEDD9-201ENST00000379433 ZNF324O75467 553 aaPredicted RBP8.19□□□□□ -1.1
NEDD9-201ENST00000379433 SNCGO76070 127 aa8.19□□□□□ -1.1
NEDD9-201ENST00000379433 TRPT1Q86TN4 253 aaKnown RBP8.19□□□□□ -1.1
NEDD9-201ENST00000379433 KCNS1Q96KK3 526 aa8.19□□□□□ -1.1
NEDD9-201ENST00000379433 D6R8Y8 96 aa8.19□□□□□ -1.1
NEDD9-201ENST00000379433 M0R381 172 aa8.19□□□□□ -1.1
NEDD9-201ENST00000379433 LEPP41159 167 aa8.19□□□□□ -1.1
NEDD9-201ENST00000379433 PRSS3P2Q8NHM4 247 aa8.19□□□□□ -1.1
NEDD9-201ENST00000379433 A0A096LNT2 108 aa8.18□□□□□ -1.1
NEDD9-201ENST00000379433 A0A1W2PPM0 123 aa8.18□□□□□ -1.1
NEDD9-201ENST00000379433 GAS8-AS1O95177 125 aa8.18□□□□□ -1.1
NEDD9-201ENST00000379433 APOMO95445 188 aa8.18□□□□□ -1.1
NEDD9-201ENST00000379433 S100A4P26447 101 aaKnown RBP8.18□□□□□ -1.1
NEDD9-201ENST00000379433 RIGQ13278 110 aa8.18□□□□□ -1.1
NEDD9-201ENST00000379433 C18orf15Q96N68 181 aa8.18□□□□□ -1.1
NEDD9-201ENST00000379433 NBEAL2Q6ZNJ1 2754 aa8.18□□□□□ -1.1
NEDD9-201ENST00000379433 TRAV12-2A0A075B6T6 113 aa8.18□□□□□ -1.1
NEDD9-201ENST00000379433 TRAV26-2A0A0B4J265 109 aa8.18□□□□□ -1.1
NEDD9-201ENST00000379433 H3BVH4 76 aa8.18□□□□□ -1.1
NEDD9-201ENST00000379433 J3QKU1 62 aa8.18□□□□□ -1.1
NEDD9-201ENST00000379433 GATA1P15976 413 aaPredicted RBP8.18□□□□□ -1.1
NEDD9-201ENST00000379433 C11orf45Q8TAV5 145 aa8.18□□□□□ -1.1
NEDD9-201ENST00000379433 DAZ1Q9NQZ3 744 aaKnown RBP8.18□□□□□ -1.1
NEDD9-201ENST00000379433 ZNF492Q9P255 531 aa8.18□□□□□ -1.1
NEDD9-201ENST00000379433 ELANEP08246 267 aa8.18□□□□□ -1.1
NEDD9-201ENST00000379433 PMVKQ15126 192 aa8.18□□□□□ -1.1
NEDD9-201ENST00000379433 PSMG4Q5JS54 123 aa8.18□□□□□ -1.1
NEDD9-201ENST00000379433 C11orf21Q9P2W6 132 aa8.18□□□□□ -1.1
NEDD9-201ENST00000379433 PDZD2O15018 2839 aa8.17□□□□□ -1.1
NEDD9-201ENST00000379433 H3BRM9 83 aa8.17□□□□□ -1.1
NEDD9-201ENST00000379433 RPL13AP40429 203 aaKnown RBP8.17□□□□□ -1.1
NEDD9-201ENST00000379433 SLURP1P55000 103 aa8.17□□□□□ -1.1
NEDD9-201ENST00000379433 SEC11AP67812 179 aa8.17□□□□□ -1.1
NEDD9-201ENST00000379433 PRR9Q5T870 116 aa8.17□□□□□ -1.1
NEDD9-201ENST00000379433 SLC25A34Q6PIV7 304 aa8.17□□□□□ -1.1
NEDD9-201ENST00000379433 USMG5Q96IX5 58 aa8.17□□□□□ -1.1
NEDD9-201ENST00000379433 LINC01587Q99440 93 aa8.17□□□□□ -1.1
NEDD9-201ENST00000379433 KLK5Q9Y337 293 aaPredicted RBP8.17□□□□□ -1.1
NEDD9-201ENST00000379433 IGHV4OR15-8A0A075B7B6 117 aa8.17□□□□□ -1.1
NEDD9-201ENST00000379433 A0A087WW49 117 aa8.17□□□□□ -1.1
NEDD9-201ENST00000379433 A0A1B0GWB2 263 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms