RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 C14orf178Q8N769 122 aaPredicted RBP7.78□□□□□ -1.16
POLR2J3-201ENST00000379340 DYNLRB2Q8TF09 96 aa7.78□□□□□ -1.16
POLR2J3-201ENST00000379340 TMEM160Q9NX00 188 aa7.78□□□□□ -1.16
POLR2J3-201ENST00000379340 TRAV25A0A0B4J276 109 aa7.77□□□□□ -1.17
POLR2J3-201ENST00000379340 IGHV3-16A0A0C4DH30 117 aa7.77□□□□□ -1.17
POLR2J3-201ENST00000379340 LINC01549A6NIU2 74 aa7.77□□□□□ -1.17
POLR2J3-201ENST00000379340 MGPP08493 103 aa7.77□□□□□ -1.17
POLR2J3-201ENST00000379340 HLA-DRB4P13762 266 aa7.77□□□□□ -1.17
POLR2J3-201ENST00000379340 AMTNQ6UX39 209 aa7.77□□□□□ -1.17
POLR2J3-201ENST00000379340 LINC00469Q8N7U9 141 aa7.77□□□□□ -1.17
POLR2J3-201ENST00000379340 RASL10AQ92737 203 aa7.77□□□□□ -1.17
POLR2J3-201ENST00000379340 C16orf95Q9H693 158 aa7.77□□□□□ -1.17
POLR2J3-201ENST00000379340 KIF25-AS1Q9Y6Z4 181 aa7.77□□□□□ -1.17
POLR2J3-201ENST00000379340 HLA-DRB4X5D2U9 266 aa7.77□□□□□ -1.17
POLR2J3-201ENST00000379340 RNASE1P07998 156 aaKnown RBP7.76□□□□□ -1.17
POLR2J3-201ENST00000379340 COX8AP10176 69 aa7.76□□□□□ -1.17
POLR2J3-201ENST00000379340 G0S2P27469 103 aa7.76□□□□□ -1.17
POLR2J3-201ENST00000379340 FXYD7P58549 80 aa7.76□□□□□ -1.17
POLR2J3-201ENST00000379340 DLX4Q92988 240 aaPredicted RBP7.76□□□□□ -1.17
POLR2J3-201ENST00000379340 FHL3Q13643 280 aa7.76□□□□□ -1.17
POLR2J3-201ENST00000379340 SPINK13Q1W4C9 94 aa7.76□□□□□ -1.17
POLR2J3-201ENST00000379340 CLUHP3Q96NS8 147 aa7.76□□□□□ -1.17
POLR2J3-201ENST00000379340 SPAG8Q99932 426 aaPredicted RBP7.76□□□□□ -1.17
POLR2J3-201ENST00000379340 MCRIP2Q9BUT9 160 aaKnown RBP7.76□□□□□ -1.17
POLR2J3-201ENST00000379340 TRAV12-2A0A075B6T6 113 aa7.75□□□□□ -1.17
POLR2J3-201ENST00000379340 NUDT3O95989 172 aa7.75□□□□□ -1.17
POLR2J3-201ENST00000379340 IGKV3-20P01619 116 aa7.75□□□□□ -1.17
POLR2J3-201ENST00000379340 LINC00315P59091 139 aa7.75□□□□□ -1.17
POLR2J3-201ENST00000379340 DEFB131AP59861 70 aa7.75□□□□□ -1.17
POLR2J3-201ENST00000379340 BATFQ16520 125 aa7.75□□□□□ -1.17
POLR2J3-201ENST00000379340 DEFB114Q30KQ6 69 aa7.75□□□□□ -1.17
POLR2J3-201ENST00000379340 TMEM61Q8N0U2 210 aa7.75□□□□□ -1.17
POLR2J3-201ENST00000379340 C18orf15Q96N68 181 aa7.75□□□□□ -1.17
POLR2J3-201ENST00000379340 ZMAT4Q9H898 229 aa7.75□□□□□ -1.17
POLR2J3-201ENST00000379340 ESM1Q9NQ30 184 aa7.75□□□□□ -1.17
POLR2J3-201ENST00000379340 H3BMM0 161 aa7.74□□□□□ -1.17
POLR2J3-201ENST00000379340 TCAPO15273 167 aa7.74□□□□□ -1.17
POLR2J3-201ENST00000379340 PRSS1P07477 247 aa7.74□□□□□ -1.17
POLR2J3-201ENST00000379340 ODF1Q14990 250 aa7.74□□□□□ -1.17
POLR2J3-201ENST00000379340 Q8N1Y9 231 aa7.74□□□□□ -1.17
POLR2J3-201ENST00000379340 ZNF418Q8TF45 676 aaPredicted RBP7.74□□□□□ -1.17
POLR2J3-201ENST00000379340 TOMM6Q96B49 74 aa7.74□□□□□ -1.17
POLR2J3-201ENST00000379340 TSSC4Q9Y5U2 329 aaPredicted RBP7.74□□□□□ -1.17
POLR2J3-201ENST00000379340 TRAV12-1A0A0B4J245 112 aa7.73□□□□□ -1.17
POLR2J3-201ENST00000379340 TRBV6-5A0A0K0K1A5 114 aa7.73□□□□□ -1.17
POLR2J3-201ENST00000379340 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.73□□□□□ -1.17
POLR2J3-201ENST00000379340 DLEU1O43261 78 aa7.73□□□□□ -1.17
POLR2J3-201ENST00000379340 C12orf54Q6X4T0 127 aa7.73□□□□□ -1.17
POLR2J3-201ENST00000379340 RPL39LQ96EH5 51 aaKnown RBP7.73□□□□□ -1.17
POLR2J3-201ENST00000379340 RAX2Q96IS3 184 aa7.73□□□□□ -1.17
POLR2J3-201ENST00000379340 LINC00467Q9BRT7 94 aa7.73□□□□□ -1.17
POLR2J3-201ENST00000379340 MAP6D1Q9H9H5 199 aa7.73□□□□□ -1.17
POLR2J3-201ENST00000379340 MUC4Q99102 2169 aa7.73□□□□□ -1.17
POLR2J3-201ENST00000379340 PKD1L1Q8TDX9 2849 aa7.72□□□□□ -1.17
POLR2J3-201ENST00000379340 KNCNA6PVL3 124 aa7.72□□□□□ -1.17
POLR2J3-201ENST00000379340 SIVA1O15304 175 aa7.72□□□□□ -1.17
POLR2J3-201ENST00000379340 SPRY2O43597 315 aa7.72□□□□□ -1.17
POLR2J3-201ENST00000379340 DPM2O94777 84 aa7.72□□□□□ -1.17
POLR2J3-201ENST00000379340 IGKCP01834 107 aa7.72□□□□□ -1.17
POLR2J3-201ENST00000379340 CMC4P56277 68 aaPredicted RBP7.72□□□□□ -1.17
POLR2J3-201ENST00000379340 ANKRD39Q53RE8 183 aa7.72□□□□□ -1.17
POLR2J3-201ENST00000379340 PIK3CD-AS1Q5SR53 167 aa7.72□□□□□ -1.17
POLR2J3-201ENST00000379340 SUMO4Q6EEV6 95 aa7.72□□□□□ -1.17
POLR2J3-201ENST00000379340 PTH2Q96A98 100 aa7.72□□□□□ -1.17
POLR2J3-201ENST00000379340 DUX3Q96PT4 197 aa7.72□□□□□ -1.17
POLR2J3-201ENST00000379340 DKK2Q9UBU2 259 aa7.72□□□□□ -1.17
POLR2J3-201ENST00000379340 ZNF256Q9Y2P7 627 aaPredicted RBP7.72□□□□□ -1.17
POLR2J3-201ENST00000379340 A0A087WX48 190 aa7.71□□□□□ -1.17
POLR2J3-201ENST00000379340 CBY3A6NI87 242 aa7.71□□□□□ -1.17
POLR2J3-201ENST00000379340 CCL24O00175 119 aa7.71□□□□□ -1.17
POLR2J3-201ENST00000379340 VCYO14598 125 aa7.71□□□□□ -1.17
POLR2J3-201ENST00000379340 NDUFA7O95182 113 aa7.71□□□□□ -1.17
POLR2J3-201ENST00000379340 HINT1P49773 126 aaPredicted RBP7.71□□□□□ -1.17
POLR2J3-201ENST00000379340 POLR2KP53803 58 aaKnown RBP7.71□□□□□ -1.17
POLR2J3-201ENST00000379340 HILS1P60008 231 aa7.71□□□□□ -1.17
POLR2J3-201ENST00000379340 BOD1L2Q8IYS8 172 aa7.71□□□□□ -1.17
POLR2J3-201ENST00000379340 JMJD8Q96S16 334 aa7.71□□□□□ -1.17
POLR2J3-201ENST00000379340 CSTL1Q9H114 145 aa7.71□□□□□ -1.17
POLR2J3-201ENST00000379340 EDA2RQ9HAV5 297 aa7.71□□□□□ -1.17
POLR2J3-201ENST00000379340 MDFICQ9P1T7 246 aa7.71□□□□□ -1.17
POLR2J3-201ENST00000379340 F5H697 171 aa7.71□□□□□ -1.18
POLR2J3-201ENST00000379340 CD28P10747 220 aa7.71□□□□□ -1.18
POLR2J3-201ENST00000379340 FGF6P10767 208 aa7.71□□□□□ -1.18
POLR2J3-201ENST00000379340 PLNP26678 52 aa7.71□□□□□ -1.18
POLR2J3-201ENST00000379340 ZNF415Q09FC8 603 aa7.71□□□□□ -1.18
POLR2J3-201ENST00000379340 CD300EQ496F6 205 aaPredicted RBP7.71□□□□□ -1.18
POLR2J3-201ENST00000379340 TRPT1Q86TN4 253 aaKnown RBP7.71□□□□□ -1.18
POLR2J3-201ENST00000379340 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.71□□□□□ -1.18
POLR2J3-201ENST00000379340 STPG4Q8N801 248 aa7.71□□□□□ -1.18
POLR2J3-201ENST00000379340 LINC01006Q8NI28 216 aa7.71□□□□□ -1.18
POLR2J3-201ENST00000379340 SCGB3A1Q96QR1 104 aa7.71□□□□□ -1.18
POLR2J3-201ENST00000379340 KIR2DL4Q99706 377 aa7.71□□□□□ -1.18
POLR2J3-201ENST00000379340 H7C1H1 209 aa7.7□□□□□ -1.18
POLR2J3-201ENST00000379340 INSP01308 110 aa7.7□□□□□ -1.18
POLR2J3-201ENST00000379340 CRYGDP07320 174 aa7.7□□□□□ -1.18
POLR2J3-201ENST00000379340 ZNF56Q15929 161 aa7.7□□□□□ -1.18
POLR2J3-201ENST00000379340 C2orf66Q6UXQ4 117 aa7.7□□□□□ -1.18
POLR2J3-201ENST00000379340 JPT2Q9H910 190 aa7.7□□□□□ -1.18
POLR2J3-201ENST00000379340 CYSLTR1Q9Y271 337 aa7.7□□□□□ -1.18
POLR2J3-201ENST00000379340 A0A087WWL8 130 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms