RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 ARL3P36405 182 aa6.18□□□□□ -1.42
PTPRR-203ENST00000378778 TMEM170BQ5T4T1 132 aa6.18□□□□□ -1.42
PTPRR-203ENST00000378778 UBE2WQ96B02 151 aa6.18□□□□□ -1.42
PTPRR-203ENST00000378778 EDA2RQ9HAV5 297 aa6.18□□□□□ -1.42
PTPRR-203ENST00000378778 SVILO95425 2214 aa6.18□□□□□ -1.42
PTPRR-203ENST00000378778 PRB4P10163 310 aaPredicted RBP6.18□□□□□ -1.42
PTPRR-203ENST00000378778 SIRPDQ9H106 197 aa6.18□□□□□ -1.42
PTPRR-203ENST00000378778 YAE1D1Q9NRH1 226 aa6.18□□□□□ -1.42
PTPRR-203ENST00000378778 SPTBN2O15020 2390 aa6.17□□□□□ -1.42
PTPRR-203ENST00000378778 ATP6V0E1O15342 81 aa6.17□□□□□ -1.42
PTPRR-203ENST00000378778 C19orf54Q5BKX5 351 aa6.17□□□□□ -1.42
PTPRR-203ENST00000378778 DEFB124Q8NES8 71 aa6.17□□□□□ -1.42
PTPRR-203ENST00000378778 PYGO1Q9Y3Y4 419 aa6.17□□□□□ -1.42
PTPRR-203ENST00000378778 ABCA1O95477 2261 aa6.17□□□□□ -1.42
PTPRR-203ENST00000378778 A0A0J9YXY3 114 aa6.17□□□□□ -1.42
PTPRR-203ENST00000378778 KLLNB2CW77 178 aa6.17□□□□□ -1.42
PTPRR-203ENST00000378778 TIMM17BO60830 172 aa6.17□□□□□ -1.42
PTPRR-203ENST00000378778 LY6DQ14210 128 aa6.17□□□□□ -1.42
PTPRR-203ENST00000378778 ECSCRQ19T08 205 aa6.17□□□□□ -1.42
PTPRR-203ENST00000378778 Q6ZS46 218 aa6.17□□□□□ -1.42
PTPRR-203ENST00000378778 USMG5Q96IX5 58 aa6.17□□□□□ -1.42
PTPRR-203ENST00000378778 EP300Q09472 2414 aaPredicted RBP6.16□□□□□ -1.42
PTPRR-203ENST00000378778 TRBV7-7A0A0K0K1E9 115 aa6.16□□□□□ -1.42
PTPRR-203ENST00000378778 LYNX1G3V0Z9 82 aa6.16□□□□□ -1.42
PTPRR-203ENST00000378778 ATP5G1P05496 136 aa6.16□□□□□ -1.42
PTPRR-203ENST00000378778 LYNX1P0DP58 116 aa6.16□□□□□ -1.42
PTPRR-203ENST00000378778 TSPEAR-AS2P59090 65 aa6.16□□□□□ -1.42
PTPRR-203ENST00000378778 PRB3Q04118 309 aaPredicted RBP6.16□□□□□ -1.42
PTPRR-203ENST00000378778 SUMO4Q6EEV6 95 aa6.16□□□□□ -1.42
PTPRR-203ENST00000378778 TRPT1Q86TN4 253 aaKnown RBP6.16□□□□□ -1.42
PTPRR-203ENST00000378778 ZNRF2Q8NHG8 242 aa6.16□□□□□ -1.42
PTPRR-203ENST00000378778 NTN5Q8WTR8 489 aaPredicted RBP6.16□□□□□ -1.42
PTPRR-203ENST00000378778 C20orf173Q96LM9 149 aa6.16□□□□□ -1.42
PTPRR-203ENST00000378778 B5MCH6 92 aa6.16□□□□□ -1.42
PTPRR-203ENST00000378778 ID1P41134 155 aa6.16□□□□□ -1.42
PTPRR-203ENST00000378778 SS18L2Q9UHA2 77 aa6.16□□□□□ -1.42
PTPRR-203ENST00000378778 FASNP49327 2511 aaKnown RBP6.16□□□□□ -1.42
PTPRR-203ENST00000378778 TRAV2A0A0B4J234 112 aa6.15□□□□□ -1.42
PTPRR-203ENST00000378778 GHRHP01286 108 aa6.15□□□□□ -1.42
PTPRR-203ENST00000378778 FAM159AQ6UWV7 190 aa6.15□□□□□ -1.42
PTPRR-203ENST00000378778 MUSTN1Q8IVN3 82 aa6.15□□□□□ -1.42
PTPRR-203ENST00000378778 COPS9Q8WXC6 57 aa6.15□□□□□ -1.42
PTPRR-203ENST00000378778 C11orf71Q6IPW1 123 aa6.15□□□□□ -1.43
PTPRR-203ENST00000378778 C15orf53Q8NAA6 179 aa6.15□□□□□ -1.43
PTPRR-203ENST00000378778 PPDPFQ9H3Y8 114 aa6.15□□□□□ -1.43
PTPRR-203ENST00000378778 ANKRD11Q6UB99 2663 aaPredicted RBP6.15□□□□□ -1.43
PTPRR-203ENST00000378778 TRAV4A0A0B4J268 109 aa6.14□□□□□ -1.43
PTPRR-203ENST00000378778 FAM90A27PA6NNH2 459 aa6.14□□□□□ -1.43
PTPRR-203ENST00000378778 ZNF22P17026 224 aaPredicted RBP6.14□□□□□ -1.43
PTPRR-203ENST00000378778 GATA3P23771 443 aa6.14□□□□□ -1.43
PTPRR-203ENST00000378778 Q1RN00 199 aa6.14□□□□□ -1.43
PTPRR-203ENST00000378778 C5orf56Q8N8D9 126 aa6.14□□□□□ -1.43
PTPRR-203ENST00000378778 C9orf85Q96MD7 179 aa6.14□□□□□ -1.43
PTPRR-203ENST00000378778 ZNF256Q9Y2P7 627 aaPredicted RBP6.14□□□□□ -1.43
PTPRR-203ENST00000378778 MAP1BP46821 2468 aaKnown RBP6.14□□□□□ -1.43
PTPRR-203ENST00000378778 FRYLO94915 3013 aa6.14□□□□□ -1.43
PTPRR-203ENST00000378778 TRAV41A0A0B4J266 112 aa6.14□□□□□ -1.43
PTPRR-203ENST00000378778 IGHV3-35A0A0C4DH35 117 aa6.14□□□□□ -1.43
PTPRR-203ENST00000378778 IGHV3-66A0A0C4DH42 116 aa6.14□□□□□ -1.43
PTPRR-203ENST00000378778 K7EMT4 169 aa6.14□□□□□ -1.43
PTPRR-203ENST00000378778 C2orf82Q6UX34 121 aa6.14□□□□□ -1.43
PTPRR-203ENST00000378778 C20orf203Q8NBC4 194 aa6.14□□□□□ -1.43
PTPRR-203ENST00000378778 MOB4Q9Y3A3 225 aa6.14□□□□□ -1.43
PTPRR-203ENST00000378778 URB1O60287 2271 aaKnown RBP6.14□□□□□ -1.43
PTPRR-203ENST00000378778 IGHV3OR16-8A0A075B7F1 116 aa6.13□□□□□ -1.43
PTPRR-203ENST00000378778 I3L3M4 83 aa6.13□□□□□ -1.43
PTPRR-203ENST00000378778 FOXC1Q12948 553 aa6.13□□□□□ -1.43
PTPRR-203ENST00000378778 SFTA2Q6UW10 78 aa6.13□□□□□ -1.43
PTPRR-203ENST00000378778 ICOSQ9Y6W8 199 aa6.13□□□□□ -1.43
PTPRR-203ENST00000378778 MRPS36P82909 103 aaKnown RBP6.13□□□□□ -1.43
PTPRR-203ENST00000378778 TNP2Q05952 138 aa6.13□□□□□ -1.43
PTPRR-203ENST00000378778 TMEM101Q96IK0 257 aa6.13□□□□□ -1.43
PTPRR-203ENST00000378778 ZNF292O60281 2723 aa6.13□□□□□ -1.43
PTPRR-203ENST00000378778 M0QY20 66 aa6.12□□□□□ -1.43
PTPRR-203ENST00000378778 LST1O00453 97 aa6.12□□□□□ -1.43
PTPRR-203ENST00000378778 GNRH2O43555 120 aa6.12□□□□□ -1.43
PTPRR-203ENST00000378778 IGF1P05019 195 aa6.12□□□□□ -1.43
PTPRR-203ENST00000378778 MIAQ16674 131 aa6.12□□□□□ -1.43
PTPRR-203ENST00000378778 PIK3CD-AS1Q5SR53 167 aa6.12□□□□□ -1.43
PTPRR-203ENST00000378778 LINC00528Q8N1L1 170 aa6.12□□□□□ -1.43
PTPRR-203ENST00000378778 Q8NA96 180 aa6.12□□□□□ -1.43
PTPRR-203ENST00000378778 ZNF580Q9UK33 172 aa6.12□□□□□ -1.43
PTPRR-203ENST00000378778 LINC01548A6NM66 108 aa6.12□□□□□ -1.43
PTPRR-203ENST00000378778 TRIAP1O43715 76 aa6.12□□□□□ -1.43
PTPRR-203ENST00000378778 EIF4EBP3O60516 100 aaPredicted RBP6.12□□□□□ -1.43
PTPRR-203ENST00000378778 RPL39P62891 51 aaKnown RBP6.12□□□□□ -1.43
PTPRR-203ENST00000378778 TIMM21Q9BVV7 248 aa6.12□□□□□ -1.43
PTPRR-203ENST00000378778 IGHV1-58A0A0C4DH39 117 aa6.12□□□□□ -1.43
PTPRR-203ENST00000378778 F5H697 171 aa6.12□□□□□ -1.43
PTPRR-203ENST00000378778 H7C423 109 aa6.12□□□□□ -1.43
PTPRR-203ENST00000378778 ZNF561-AS1K7EIQ3 104 aa6.12□□□□□ -1.43
PTPRR-203ENST00000378778 Q6ZQT7 251 aa6.12□□□□□ -1.43
PTPRR-203ENST00000378778 CEP250Q9BV73 2442 aa6.11□□□□□ -1.43
PTPRR-203ENST00000378778 IGLV4-3A0A075B6K6 122 aa6.11□□□□□ -1.43
PTPRR-203ENST00000378778 TINCRA0A1B0GVN0 87 aa6.11□□□□□ -1.43
PTPRR-203ENST00000378778 LITAFQ99732 161 aa6.11□□□□□ -1.43
PTPRR-203ENST00000378778 WDFY3Q8IZQ1 3526 aa6.11□□□□□ -1.43
PTPRR-203ENST00000378778 IGHV3OR16-13A0A075B7E8 117 aa6.11□□□□□ -1.43
PTPRR-203ENST00000378778 IGHV3-74A0A0B4J1X5 117 aa6.11□□□□□ -1.43
PTPRR-203ENST00000378778 IGHV3-16A0A0C4DH30 117 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms