RNA–Protein interactions for RNA: ENST00000377865.6

PCDH9-202, Transcript of protocadherin 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PCDH9, Length 5,709 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-202ENST00000377865 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.68□□□□□ -1.34
PCDH9-202ENST00000377865 A0A0J9YY99 117 aa6.68□□□□□ -1.34
PCDH9-202ENST00000377865 IGKV2-29A2NJV5 120 aaPredicted RBP6.68□□□□□ -1.34
PCDH9-202ENST00000377865 ATOX1O00244 68 aa6.68□□□□□ -1.34
PCDH9-202ENST00000377865 CFAP126Q5VTH2 177 aa6.68□□□□□ -1.34
PCDH9-202ENST00000377865 LGALS9O00182 355 aa6.67□□□□□ -1.34
PCDH9-202ENST00000377865 GNLYP22749 145 aa6.67□□□□□ -1.34
PCDH9-202ENST00000377865 RNASE13Q5GAN3 156 aaKnown RBP6.67□□□□□ -1.34
PCDH9-202ENST00000377865 PTH2Q96A98 100 aa6.67□□□□□ -1.34
PCDH9-202ENST00000377865 RNF183Q96D59 192 aa6.67□□□□□ -1.34
PCDH9-202ENST00000377865 UBL5Q9BZL1 73 aa6.67□□□□□ -1.34
PCDH9-202ENST00000377865 ADAMTS20P59510 1910 aa6.67□□□□□ -1.34
PCDH9-202ENST00000377865 TMEM223A0PJW6 202 aa6.67□□□□□ -1.34
PCDH9-202ENST00000377865 H0YGX0 51 aa6.67□□□□□ -1.34
PCDH9-202ENST00000377865 UBE2E2Q96LR5 201 aa6.67□□□□□ -1.34
PCDH9-202ENST00000377865 GPHB5Q86YW7 130 aa6.67□□□□□ -1.34
PCDH9-202ENST00000377865 TINCRA0A1B0GVN0 87 aa6.67□□□□□ -1.34
PCDH9-202ENST00000377865 MRPS12O15235 138 aaKnown RBP6.67□□□□□ -1.34
PCDH9-202ENST00000377865 NDUFV3P56181 108 aaKnown RBP6.67□□□□□ -1.34
PCDH9-202ENST00000377865 Q8N1Y9 231 aa6.67□□□□□ -1.34
PCDH9-202ENST00000377865 FREM1Q5H8C1 2179 aa6.66□□□□□ -1.34
PCDH9-202ENST00000377865 CITED1Q99966 193 aa6.66□□□□□ -1.34
PCDH9-202ENST00000377865 A0A0J9YXY3 114 aa6.66□□□□□ -1.34
PCDH9-202ENST00000377865 LY6DQ14210 128 aa6.66□□□□□ -1.34
PCDH9-202ENST00000377865 DAZ2Q13117 558 aaKnown RBP6.66□□□□□ -1.34
PCDH9-202ENST00000377865 DAZ4Q86SG3 579 aaKnown RBP6.66□□□□□ -1.34
PCDH9-202ENST00000377865 DAZ3Q9NR90 486 aaKnown RBP6.66□□□□□ -1.34
PCDH9-202ENST00000377865 BRWD1Q9NSI6 2320 aa6.66□□□□□ -1.34
PCDH9-202ENST00000377865 TRBV30A0A0K0K1B3 111 aa6.66□□□□□ -1.34
PCDH9-202ENST00000377865 ZFP36P26651 326 aaKnown RBP6.66□□□□□ -1.34
PCDH9-202ENST00000377865 GRNP28799 593 aaKnown RBP6.66□□□□□ -1.34
PCDH9-202ENST00000377865 ORMDL1Q9P0S3 153 aa6.66□□□□□ -1.34
PCDH9-202ENST00000377865 XCL2Q9UBD3 114 aa6.66□□□□□ -1.34
PCDH9-202ENST00000377865 IGHG2P01859 326 aa6.65□□□□□ -1.34
PCDH9-202ENST00000377865 IGHV3-30-3P0DP02 117 aa6.65□□□□□ -1.34
PCDH9-202ENST00000377865 NFE4Q86UQ8 179 aa6.65□□□□□ -1.34
PCDH9-202ENST00000377865 TNFRSF13BO14836 293 aaPredicted RBP6.65□□□□□ -1.34
PCDH9-202ENST00000377865 DOCK7Q96N67 2140 aa6.65□□□□□ -1.34
PCDH9-202ENST00000377865 FAM236AA0A1B0GUQ0 79 aa6.65□□□□□ -1.34
PCDH9-202ENST00000377865 FAM236BA0A1B0GV22 79 aa6.65□□□□□ -1.34
PCDH9-202ENST00000377865 IGHV3-30P01768 117 aa6.65□□□□□ -1.34
PCDH9-202ENST00000377865 IGHV3-30-5P0DP03 117 aa6.65□□□□□ -1.34
PCDH9-202ENST00000377865 HHLA3Q9XRX5 114 aa6.65□□□□□ -1.35
PCDH9-202ENST00000377865 K7EQD1 137 aa6.65□□□□□ -1.35
PCDH9-202ENST00000377865 Q8N6K4 173 aa6.65□□□□□ -1.35
PCDH9-202ENST00000377865 VSIG2Q96IQ7 327 aa6.65□□□□□ -1.35
PCDH9-202ENST00000377865 U3KQE9 123 aa6.65□□□□□ -1.35
PCDH9-202ENST00000377865 HOXD3P31249 432 aaPredicted RBP6.64□□□□□ -1.35
PCDH9-202ENST00000377865 USF3Q68DE3 2245 aa6.64□□□□□ -1.35
PCDH9-202ENST00000377865 TRBV6-5A0A0K0K1A5 114 aa6.64□□□□□ -1.35
PCDH9-202ENST00000377865 J3KT08 172 aa6.64□□□□□ -1.35
PCDH9-202ENST00000377865 SMIM20Q8N5G0 67 aa6.64□□□□□ -1.35
PCDH9-202ENST00000377865 LINC00643Q86TS7 51 aa6.64□□□□□ -1.35
PCDH9-202ENST00000377865 CLEC2BQ92478 149 aa6.64□□□□□ -1.35
PCDH9-202ENST00000377865 C20orf173Q96LM9 149 aa6.64□□□□□ -1.35
PCDH9-202ENST00000377865 A0A0J9YX75 114 aa6.64□□□□□ -1.35
PCDH9-202ENST00000377865 LINC01546A6NGU7 62 aa6.63□□□□□ -1.35
PCDH9-202ENST00000377865 RPL35AP18077 110 aaKnown RBP6.63□□□□□ -1.35
PCDH9-202ENST00000377865 PFN2P35080 140 aa6.63□□□□□ -1.35
PCDH9-202ENST00000377865 UNQ9165/PRO28630Q6UXU0 137 aa6.63□□□□□ -1.35
PCDH9-202ENST00000377865 ZFAND2AQ8N6M9 145 aa6.63□□□□□ -1.35
PCDH9-202ENST00000377865 VPREB3Q9UKI3 123 aa6.63□□□□□ -1.35
PCDH9-202ENST00000377865 A0A096LNJ9 63 aa6.63□□□□□ -1.35
PCDH9-202ENST00000377865 H3BQ85 93 aa6.63□□□□□ -1.35
PCDH9-202ENST00000377865 ZNF22P17026 224 aaPredicted RBP6.63□□□□□ -1.35
PCDH9-202ENST00000377865 PSMG3-AS1Q96PY0 264 aa6.63□□□□□ -1.35
PCDH9-202ENST00000377865 IGHV3-33P01772 117 aa6.63□□□□□ -1.35
PCDH9-202ENST00000377865 RBMY1FQ15415 496 aaKnown RBP6.63□□□□□ -1.35
PCDH9-202ENST00000377865 DOCK10Q96BY6 2186 aa6.62□□□□□ -1.35
PCDH9-202ENST00000377865 C22orf34Q6ZV56 151 aa6.62□□□□□ -1.35
PCDH9-202ENST00000377865 COX7B2Q8TF08 81 aa6.62□□□□□ -1.35
PCDH9-202ENST00000377865 EP400Q96L91 3159 aa6.62□□□□□ -1.35
PCDH9-202ENST00000377865 A6NDX4 124 aa6.62□□□□□ -1.35
PCDH9-202ENST00000377865 IGF1P05019 195 aa6.62□□□□□ -1.35
PCDH9-202ENST00000377865 ADORA2A-AS1P86434 159 aa6.62□□□□□ -1.35
PCDH9-202ENST00000377865 TRBV27A0A0K0K1C4 114 aa6.62□□□□□ -1.35
PCDH9-202ENST00000377865 COX7A2LO14548 114 aa6.62□□□□□ -1.35
PCDH9-202ENST00000377865 TIMM17BO60830 172 aa6.62□□□□□ -1.35
PCDH9-202ENST00000377865 CRLF1O75462 422 aa6.61□□□□□ -1.35
PCDH9-202ENST00000377865 IGHV4OR15-8A0A075B7B6 117 aa6.61□□□□□ -1.35
PCDH9-202ENST00000377865 A0A087WW49 117 aa6.61□□□□□ -1.35
PCDH9-202ENST00000377865 IGHV4-38-2P0DP08 117 aa6.61□□□□□ -1.35
PCDH9-202ENST00000377865 Q6Q795 121 aa6.61□□□□□ -1.35
PCDH9-202ENST00000377865 SND1-IT1Q9HBX3 110 aa6.61□□□□□ -1.35
PCDH9-202ENST00000377865 PYGO1Q9Y3Y4 419 aa6.61□□□□□ -1.35
PCDH9-202ENST00000377865 NBL1P41271 181 aa6.61□□□□□ -1.35
PCDH9-202ENST00000377865 IGLV4-3A0A075B6K6 122 aa6.61□□□□□ -1.35
PCDH9-202ENST00000377865 Q8NA96 180 aa6.61□□□□□ -1.35
PCDH9-202ENST00000377865 TRBV12-3P01733 135 aa6.61□□□□□ -1.35
PCDH9-202ENST00000377865 DEFB112Q30KQ8 113 aa6.61□□□□□ -1.35
PCDH9-202ENST00000377865 C11orf21Q9P2W6 132 aa6.61□□□□□ -1.35
PCDH9-202ENST00000377865 C16orf74Q96GX8 76 aa6.6□□□□□ -1.35
PCDH9-202ENST00000377865 DSCR8Q96T75 97 aa6.6□□□□□ -1.35
PCDH9-202ENST00000377865 OPRPNQ99935 248 aaPredicted RBP6.6□□□□□ -1.35
PCDH9-202ENST00000377865 TMEM263Q8WUH6 116 aaKnown RBP6.6□□□□□ -1.35
PCDH9-202ENST00000377865 ICE1Q9Y2F5 2266 aa6.6□□□□□ -1.35
PCDH9-202ENST00000377865 TEX49A0A1B0GTD5 131 aa6.6□□□□□ -1.35
PCDH9-202ENST00000377865 TRIAP1O43715 76 aa6.6□□□□□ -1.35
PCDH9-202ENST00000377865 IGHV4-59P01825 116 aa6.6□□□□□ -1.35
PCDH9-202ENST00000377865 C11orf44Q8N8P7 122 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms