RNA–Protein interactions for RNA: ENST00000377656.6

CNTNAP3-204, Transcript of contactin associated protein like 3, humanhuman

TSL 1 (best) BASIC

Gene CNTNAP3, Length 4,986 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3-204ENST00000377656 ATP6V0E2Q8NHE4 81 aa13.75□□□□□ -0.21
CNTNAP3-204ENST00000377656 MYO9AB2RTY4 2548 aa13.75□□□□□ -0.21
CNTNAP3-204ENST00000377656 E7EUB6 86 aa13.74□□□□□ -0.21
CNTNAP3-204ENST00000377656 SIRPDQ9H106 197 aa13.74□□□□□ -0.21
CNTNAP3-204ENST00000377656 H3BMG7 143 aa13.74□□□□□ -0.21
CNTNAP3-204ENST00000377656 PCP2Q8IVA1 136 aa13.74□□□□□ -0.21
CNTNAP3-204ENST00000377656 KIAA1549LQ6ZVL6 1849 aa13.74□□□□□ -0.21
CNTNAP3-204ENST00000377656 DOPEY1Q5JWR5 2465 aa13.74□□□□□ -0.21
CNTNAP3-204ENST00000377656 NPSP0C0P6 89 aa13.74□□□□□ -0.21
CNTNAP3-204ENST00000377656 Q9HAA7 133 aa13.74□□□□□ -0.21
CNTNAP3-204ENST00000377656 MRPL36Q9P0J6 103 aaKnown RBP13.74□□□□□ -0.21
CNTNAP3-204ENST00000377656 TEX48A0A1B0GUV7 120 aa13.73□□□□□ -0.21
CNTNAP3-204ENST00000377656 TMEM89A2RUT3 159 aa13.73□□□□□ -0.21
CNTNAP3-204ENST00000377656 DSCR8Q96T75 97 aa13.73□□□□□ -0.21
CNTNAP3-204ENST00000377656 C9orf47Q6ZRZ4 202 aa13.73□□□□□ -0.21
CNTNAP3-204ENST00000377656 CFC1BP0CG36 223 aa13.73□□□□□ -0.21
CNTNAP3-204ENST00000377656 CFC1P0CG37 223 aa13.73□□□□□ -0.21
CNTNAP3-204ENST00000377656 HERV-K104P63124 156 aa13.73□□□□□ -0.21
CNTNAP3-204ENST00000377656 AMTNQ6UX39 209 aa13.73□□□□□ -0.21
CNTNAP3-204ENST00000377656 ZFP2Q6ZN57 461 aa13.73□□□□□ -0.21
CNTNAP3-204ENST00000377656 C2orf16Q68DN1 1984 aa13.73□□□□□ -0.21
CNTNAP3-204ENST00000377656 K7EQD1 137 aa13.72□□□□□ -0.21
CNTNAP3-204ENST00000377656 Q8N1Y9 231 aa13.72□□□□□ -0.21
CNTNAP3-204ENST00000377656 DAZ2Q13117 558 aaKnown RBP13.72□□□□□ -0.21
CNTNAP3-204ENST00000377656 DAZ4Q86SG3 579 aaKnown RBP13.72□□□□□ -0.21
CNTNAP3-204ENST00000377656 DAZ3Q9NR90 486 aaKnown RBP13.72□□□□□ -0.21
CNTNAP3-204ENST00000377656 A0A0J9YXV3 536 aa13.71□□□□□ -0.21
CNTNAP3-204ENST00000377656 SH2D6Q7Z4S9 175 aa13.71□□□□□ -0.22
CNTNAP3-204ENST00000377656 UBE2BP63146 152 aa13.7□□□□□ -0.22
CNTNAP3-204ENST00000377656 ICOSQ9Y6W8 199 aa13.7□□□□□ -0.22
CNTNAP3-204ENST00000377656 IGF2RP11717 2491 aa13.7□□□□□ -0.22
CNTNAP3-204ENST00000377656 GTSF1Q8WW33 167 aa13.7□□□□□ -0.22
CNTNAP3-204ENST00000377656 FANCD2OSQ96PS1 177 aa13.7□□□□□ -0.22
CNTNAP3-204ENST00000377656 MYCNOSP40205 109 aa13.69□□□□□ -0.22
CNTNAP3-204ENST00000377656 PRSS47A8MTI9 375 aa13.69□□□□□ -0.22
CNTNAP3-204ENST00000377656 TRAV4A0A0B4J268 109 aa13.68□□□□□ -0.22
CNTNAP3-204ENST00000377656 PIEZO2Q9H5I5 2752 aa13.68□□□□□ -0.22
CNTNAP3-204ENST00000377656 NUPR1O60356 82 aa13.68□□□□□ -0.22
CNTNAP3-204ENST00000377656 IFITM1P13164 125 aa13.68□□□□□ -0.22
CNTNAP3-204ENST00000377656 CCL18P55774 89 aa13.68□□□□□ -0.22
CNTNAP3-204ENST00000377656 CRIP3Q6Q6R5 217 aa13.68□□□□□ -0.22
CNTNAP3-204ENST00000377656 IGLV10-54A0A075B6I4 117 aa13.67□□□□□ -0.22
CNTNAP3-204ENST00000377656 TINCRA0A1B0GVN0 87 aa13.67□□□□□ -0.22
CNTNAP3-204ENST00000377656 LINC01545Q5VT33 79 aa13.67□□□□□ -0.22
CNTNAP3-204ENST00000377656 ZNF503Q96F45 646 aa13.67□□□□□ -0.22
CNTNAP3-204ENST00000377656 IGHG4P01861 327 aa13.67□□□□□ -0.22
CNTNAP3-204ENST00000377656 C9orf153Q5TBE3 101 aa13.67□□□□□ -0.22
CNTNAP3-204ENST00000377656 LINC00173Q6ZV60 143 aa13.67□□□□□ -0.22
CNTNAP3-204ENST00000377656 CAMK2N2Q96S95 79 aa13.67□□□□□ -0.22
CNTNAP3-204ENST00000377656 NTN5Q8WTR8 489 aaPredicted RBP13.66□□□□□ -0.22
CNTNAP3-204ENST00000377656 CLPSL1A2RUU4 121 aa13.66□□□□□ -0.22
CNTNAP3-204ENST00000377656 ADAMTS9Q9P2N4 1935 aa13.66□□□□□ -0.22
CNTNAP3-204ENST00000377656 TRBV7-3A0A075B6L6 115 aa13.66□□□□□ -0.22
CNTNAP3-204ENST00000377656 A6NDX4 124 aa13.66□□□□□ -0.22
CNTNAP3-204ENST00000377656 COX7A2LO14548 114 aa13.66□□□□□ -0.22
CNTNAP3-204ENST00000377656 UNQ9165/PRO28630Q6UXU0 137 aa13.66□□□□□ -0.22
CNTNAP3-204ENST00000377656 TMEM61Q8N0U2 210 aa13.66□□□□□ -0.22
CNTNAP3-204ENST00000377656 ESM1Q9NQ30 184 aa13.66□□□□□ -0.22
CNTNAP3-204ENST00000377656 MED14OSP0DP75 135 aa13.65□□□□□ -0.22
CNTNAP3-204ENST00000377656 LMO4P61968 165 aa13.65□□□□□ -0.22
CNTNAP3-204ENST00000377656 ANKRD39Q53RE8 183 aa13.65□□□□□ -0.22
CNTNAP3-204ENST00000377656 DEFB1P60022 68 aa13.65□□□□□ -0.22
CNTNAP3-204ENST00000377656 CTRLP40313 264 aa13.65□□□□□ -0.22
CNTNAP3-204ENST00000377656 TRAV12-1A0A0B4J245 112 aa13.64□□□□□ -0.23
CNTNAP3-204ENST00000377656 C4orf3Q8WVX3 66 aa13.64□□□□□ -0.23
CNTNAP3-204ENST00000377656 PROP1O75360 226 aa13.64□□□□□ -0.23
CNTNAP3-204ENST00000377656 Q6ZPA2 131 aa13.64□□□□□ -0.23
CNTNAP3-204ENST00000377656 TNFRSF13BO14836 293 aaPredicted RBP13.64□□□□□ -0.23
CNTNAP3-204ENST00000377656 P0C879 139 aa13.64□□□□□ -0.23
CNTNAP3-204ENST00000377656 HIST2H2BCQ6DN03 193 aa13.64□□□□□ -0.23
CNTNAP3-204ENST00000377656 CITED2Q99967 270 aaPredicted RBP13.64□□□□□ -0.23
CNTNAP3-204ENST00000377656 DEFB125Q8N687 156 aa13.63□□□□□ -0.23
CNTNAP3-204ENST00000377656 LINC00574Q9H8X3 128 aa13.63□□□□□ -0.23
CNTNAP3-204ENST00000377656 RPL39P62891 51 aaKnown RBP13.63□□□□□ -0.23
CNTNAP3-204ENST00000377656 TMEM131Q92545 1883 aa13.63□□□□□ -0.23
CNTNAP3-204ENST00000377656 TRBV12-3P01733 135 aa13.63□□□□□ -0.23
CNTNAP3-204ENST00000377656 SPANXDQ9BXN6 97 aa13.63□□□□□ -0.23
CNTNAP3-204ENST00000377656 HHLA3Q9XRX5 114 aa13.63□□□□□ -0.23
CNTNAP3-204ENST00000377656 TRBV6-1A0A0K0K1D8 114 aa13.63□□□□□ -0.23
CNTNAP3-204ENST00000377656 CCL25O15444 150 aa13.63□□□□□ -0.23
CNTNAP3-204ENST00000377656 LOXL1Q08397 574 aaPredicted RBP13.63□□□□□ -0.23
CNTNAP3-204ENST00000377656 SND1-IT1Q9HBX3 110 aa13.63□□□□□ -0.23
CNTNAP3-204ENST00000377656 PCDH15Q96QU1 1955 aa13.62□□□□□ -0.23
CNTNAP3-204ENST00000377656 IGHV3-30P01768 117 aa13.62□□□□□ -0.23
CNTNAP3-204ENST00000377656 IGHV3-33P01772 117 aa13.62□□□□□ -0.23
CNTNAP3-204ENST00000377656 BAALC-AS2P0C853 105 aa13.62□□□□□ -0.23
CNTNAP3-204ENST00000377656 IGHV3-30-3P0DP02 117 aa13.62□□□□□ -0.23
CNTNAP3-204ENST00000377656 IGHV3-30-5P0DP03 117 aa13.62□□□□□ -0.23
CNTNAP3-204ENST00000377656 ORMDL1Q9P0S3 153 aa13.62□□□□□ -0.23
CNTNAP3-204ENST00000377656 PLXNB1O43157 2135 aa13.62□□□□□ -0.23
CNTNAP3-204ENST00000377656 A0A0J9YX75 114 aa13.62□□□□□ -0.23
CNTNAP3-204ENST00000377656 DEFB135Q30KP9 77 aa13.62□□□□□ -0.23
CNTNAP3-204ENST00000377656 MED12LQ86YW9 2145 aa13.61□□□□□ -0.23
CNTNAP3-204ENST00000377656 Q6ZVH6 145 aa13.61□□□□□ -0.23
CNTNAP3-204ENST00000377656 PKIGQ9Y2B9 76 aa13.61□□□□□ -0.23
CNTNAP3-204ENST00000377656 IGKV1D-37A0A075B6S9 117 aa13.61□□□□□ -0.23
CNTNAP3-204ENST00000377656 GAGE12HA6NDE8 117 aa13.61□□□□□ -0.23
CNTNAP3-204ENST00000377656 TIMM17AQ99595 171 aa13.61□□□□□ -0.23
CNTNAP3-204ENST00000377656 ARHGAP21Q5T5U3 1957 aa13.6□□□□□ -0.23
CNTNAP3-204ENST00000377656 ETDCA0A1B0GVM5 59 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 207.7 ms