RNA–Protein interactions for RNA: ENST00000377269.3

UBA1-202, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

TSL 2 BASIC

Gene UBA1, Length 2,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-202ENST00000377269 SRD5A1P18405 259 aa11.16□□□□□ -0.62
UBA1-202ENST00000377269 ZNF80P51504 273 aaPredicted RBP11.16□□□□□ -0.62
UBA1-202ENST00000377269 ZNF491Q8N8L2 437 aa11.16□□□□□ -0.62
UBA1-202ENST00000377269 LINC00527Q9UJ94 153 aa11.16□□□□□ -0.62
UBA1-202ENST00000377269 TRAV12-1A0A0B4J245 112 aa11.15□□□□□ -0.62
UBA1-202ENST00000377269 LINC01549A6NIU2 74 aa11.15□□□□□ -0.62
UBA1-202ENST00000377269 LGALS1P09382 135 aaKnown RBP11.15□□□□□ -0.62
UBA1-202ENST00000377269 ZFP2Q6ZN57 461 aa11.15□□□□□ -0.62
UBA1-202ENST00000377269 FAM110AQ9BQ89 295 aa11.15□□□□□ -0.62
UBA1-202ENST00000377269 LAGE3Q14657 143 aa11.15□□□□□ -0.62
UBA1-202ENST00000377269 LYRM7Q5U5X0 104 aa11.15□□□□□ -0.62
UBA1-202ENST00000377269 FN1P02751 2386 aaKnown RBP11.15□□□□□ -0.63
UBA1-202ENST00000377269 F8VRH5 84 aa11.14□□□□□ -0.63
UBA1-202ENST00000377269 H7C1H1 209 aa11.14□□□□□ -0.63
UBA1-202ENST00000377269 ATP6V0E1O15342 81 aa11.14□□□□□ -0.63
UBA1-202ENST00000377269 RNF125Q96EQ8 232 aa11.14□□□□□ -0.63
UBA1-202ENST00000377269 IGKV2-40A0A087WW87 121 aaPredicted RBP11.14□□□□□ -0.63
UBA1-202ENST00000377269 TRBV7-9A0A0J9YWB2 115 aa11.14□□□□□ -0.63
UBA1-202ENST00000377269 G3V318 75 aa11.14□□□□□ -0.63
UBA1-202ENST00000377269 IGKV2D-40P01614 121 aaPredicted RBP11.14□□□□□ -0.63
UBA1-202ENST00000377269 SHISA2Q6UWI4 295 aa11.14□□□□□ -0.63
UBA1-202ENST00000377269 LOC107984156A0A0G2JMH3 177 aa11.13□□□□□ -0.63
UBA1-202ENST00000377269 RHODO00212 210 aa11.13□□□□□ -0.63
UBA1-202ENST00000377269 ARL17AQ8IVW1 177 aa11.13□□□□□ -0.63
UBA1-202ENST00000377269 TEP1Q99973 2627 aaKnown RBP11.13□□□□□ -0.63
UBA1-202ENST00000377269 SETD2Q9BYW2 2564 aaPredicted RBP11.13□□□□□ -0.63
UBA1-202ENST00000377269 VPREB3Q9UKI3 123 aa11.13□□□□□ -0.63
UBA1-202ENST00000377269 MAST4O15021 2626 aa11.12□□□□□ -0.63
UBA1-202ENST00000377269 TRBV20-1A0A075B6N2 111 aa11.12□□□□□ -0.63
UBA1-202ENST00000377269 A8MWV9 139 aa11.12□□□□□ -0.63
UBA1-202ENST00000377269 ECSCRQ19T08 205 aa11.12□□□□□ -0.63
UBA1-202ENST00000377269 TMEM78Q5T7P6 136 aa11.12□□□□□ -0.63
UBA1-202ENST00000377269 NIPBLQ6KC79 2804 aaeCLIP11.12□□□□□ -0.63
UBA1-202ENST00000377269 K7EIM0 57 aa11.12□□□□□ -0.63
UBA1-202ENST00000377269 CD7P09564 240 aa11.12□□□□□ -0.63
UBA1-202ENST00000377269 INAFM1C9JVW0 142 aa11.11□□□□□ -0.63
UBA1-202ENST00000377269 NRACQ8N912 160 aa11.11□□□□□ -0.63
UBA1-202ENST00000377269 J3KRW8 73 aa11.11□□□□□ -0.63
UBA1-202ENST00000377269 ORM1P02763 201 aa11.11□□□□□ -0.63
UBA1-202ENST00000377269 ESM1Q9NQ30 184 aa11.11□□□□□ -0.63
UBA1-202ENST00000377269 FABP5P3A8MUU1 101 aa11.1□□□□□ -0.63
UBA1-202ENST00000377269 TCL1BO95988 128 aa11.1□□□□□ -0.63
UBA1-202ENST00000377269 Q8TAT8 98 aa11.1□□□□□ -0.63
UBA1-202ENST00000377269 GAGE12JA6NER3 117 aa11.1□□□□□ -0.63
UBA1-202ENST00000377269 GAGE7O76087 117 aa11.1□□□□□ -0.63
UBA1-202ENST00000377269 GAGE12FP0CL80 117 aa11.1□□□□□ -0.63
UBA1-202ENST00000377269 GAGE12GP0CL81 117 aa11.1□□□□□ -0.63
UBA1-202ENST00000377269 GAGE12IP0CL82 117 aa11.1□□□□□ -0.63
UBA1-202ENST00000377269 NDUFV3P56181 108 aaKnown RBP11.1□□□□□ -0.63
UBA1-202ENST00000377269 GAGE4Q13068 117 aa11.1□□□□□ -0.63
UBA1-202ENST00000377269 ANKRD29Q8N6D5 301 aa11.1□□□□□ -0.63
UBA1-202ENST00000377269 S4R3C0 116 aa11.1□□□□□ -0.63
UBA1-202ENST00000377269 ASIPP42127 132 aa11.09□□□□□ -0.63
UBA1-202ENST00000377269 HERV-K104P63124 156 aa11.09□□□□□ -0.63
UBA1-202ENST00000377269 KIR2DL4Q99706 377 aa11.09□□□□□ -0.63
UBA1-202ENST00000377269 SRSF8Q9BRL6 282 aaKnown RBP11.09□□□□□ -0.63
UBA1-202ENST00000377269 M0QXV9 152 aa11.09□□□□□ -0.63
UBA1-202ENST00000377269 IGHG2P01859 326 aa11.09□□□□□ -0.63
UBA1-202ENST00000377269 SFTA2Q6UW10 78 aa11.09□□□□□ -0.63
UBA1-202ENST00000377269 NDUFA11Q86Y39 141 aa11.09□□□□□ -0.63
UBA1-202ENST00000377269 FANCD2OSQ96PS1 177 aa11.09□□□□□ -0.63
UBA1-202ENST00000377269 DNAJC9-AS1A6NH13 148 aa11.08□□□□□ -0.64
UBA1-202ENST00000377269 JMJD1CQ15652 2540 aa11.08□□□□□ -0.64
UBA1-202ENST00000377269 RPL32P62910 135 aaKnown RBP11.08□□□□□ -0.64
UBA1-202ENST00000377269 GAGE2BQ13066 116 aa11.08□□□□□ -0.64
UBA1-202ENST00000377269 GAGE2EQ4V326 116 aa11.08□□□□□ -0.64
UBA1-202ENST00000377269 NEXN-AS1Q8NBZ9 246 aa11.08□□□□□ -0.64
UBA1-202ENST00000377269 PRADC1Q9BSG0 188 aa11.08□□□□□ -0.64
UBA1-202ENST00000377269 GAGE2DQ9UEU5 116 aa11.08□□□□□ -0.64
UBA1-202ENST00000377269 ZNF815PA8K554 130 aa11.07□□□□□ -0.64
UBA1-202ENST00000377269 IGHG4P01861 327 aa11.07□□□□□ -0.64
UBA1-202ENST00000377269 SRSF9Q13242 221 aaKnown RBP eCLIP11.07□□□□□ -0.64
UBA1-202ENST00000377269 RAX2Q96IS3 184 aa11.07□□□□□ -0.64
UBA1-202ENST00000377269 Q6Q795 121 aa11.07□□□□□ -0.64
UBA1-202ENST00000377269 TRAV41A0A0B4J266 112 aa11.06□□□□□ -0.64
UBA1-202ENST00000377269 TRGV3P03979 118 aa11.06□□□□□ -0.64
UBA1-202ENST00000377269 PLEKHB2Q96CS7 222 aa11.06□□□□□ -0.64
UBA1-202ENST00000377269 IGLV11-55A0A075B6I3 123 aa11.06□□□□□ -0.64
UBA1-202ENST00000377269 IGF1P05019 195 aa11.06□□□□□ -0.64
UBA1-202ENST00000377269 RPL7P18124 248 aaKnown RBP11.06□□□□□ -0.64
UBA1-202ENST00000377269 C19orf54Q5BKX5 351 aa11.06□□□□□ -0.64
UBA1-202ENST00000377269 C10orf99Q6UWK7 81 aa11.06□□□□□ -0.64
UBA1-202ENST00000377269 SCGB1D4Q6XE38 83 aa11.06□□□□□ -0.64
UBA1-202ENST00000377269 CCDC179H3BU77 68 aa11.05□□□□□ -0.64
UBA1-202ENST00000377269 IGHV3-23P01764 117 aa11.05□□□□□ -0.64
UBA1-202ENST00000377269 TOMM6Q96B49 74 aa11.05□□□□□ -0.64
UBA1-202ENST00000377269 ZNF702PQ9H963 129 aa11.05□□□□□ -0.64
UBA1-202ENST00000377269 SPANXA1Q9NS26 97 aa11.05□□□□□ -0.64
UBA1-202ENST00000377269 SMIM20Q8N5G0 67 aa11.04□□□□□ -0.64
UBA1-202ENST00000377269 FAM110DQ8TAY7 271 aaPredicted RBP11.04□□□□□ -0.64
UBA1-202ENST00000377269 H3BVH4 76 aa11.04□□□□□ -0.64
UBA1-202ENST00000377269 SNCGO76070 127 aa11.04□□□□□ -0.64
UBA1-202ENST00000377269 IFITM1P13164 125 aa11.04□□□□□ -0.64
UBA1-202ENST00000377269 SCGB3A1Q96QR1 104 aa11.04□□□□□ -0.64
UBA1-202ENST00000377269 TRAV26-2A0A0B4J265 109 aa11.03□□□□□ -0.64
UBA1-202ENST00000377269 TRAV4A0A0B4J268 109 aa11.03□□□□□ -0.64
UBA1-202ENST00000377269 SCGB1C2P0DMR2 95 aa11.03□□□□□ -0.64
UBA1-202ENST00000377269 ERCC8Q13216 396 aa11.03□□□□□ -0.64
UBA1-202ENST00000377269 C10orf126Q8N4M7 172 aa11.03□□□□□ -0.64
UBA1-202ENST00000377269 SMIM2Q9BVW6 85 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 240.9 ms