RNA–Protein interactions for RNA: ENST00000376406.7

MDC1-201, Transcript of mediator of DNA damage checkpoint 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene MDC1, Length 7,576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-201ENST00000376406 SPANXA1Q9NS26 97 aa8.51□□□□□ -1.05
MDC1-201ENST00000376406 K7ERJ3 54 aa8.51□□□□□ -1.05
MDC1-201ENST00000376406 CGB7P0DN87 165 aa8.51□□□□□ -1.05
MDC1-201ENST00000376406 GTSF1Q8WW33 167 aa8.51□□□□□ -1.05
MDC1-201ENST00000376406 PRRC2AP48634 2157 aaKnown RBP8.5□□□□□ -1.05
MDC1-201ENST00000376406 TRAV13-2A0A0B4J235 113 aa8.5□□□□□ -1.05
MDC1-201ENST00000376406 C2orf70A6NJV1 201 aa8.5□□□□□ -1.05
MDC1-201ENST00000376406 BUB3O43684 328 aa8.5□□□□□ -1.05
MDC1-201ENST00000376406 LINC01545Q5VT33 79 aa8.5□□□□□ -1.05
MDC1-201ENST00000376406 ZNF625Q96I27 306 aaPredicted RBP8.5□□□□□ -1.05
MDC1-201ENST00000376406 CITED2Q99967 270 aaPredicted RBP8.5□□□□□ -1.05
MDC1-201ENST00000376406 C1orf43Q9BWL3 253 aa8.5□□□□□ -1.05
MDC1-201ENST00000376406 PRSS29PA6NIE9 313 aa8.5□□□□□ -1.05
MDC1-201ENST00000376406 ATP5G1P05496 136 aa8.5□□□□□ -1.05
MDC1-201ENST00000376406 C12orf74Q32Q52 190 aa8.5□□□□□ -1.05
MDC1-201ENST00000376406 C9orf47Q6ZRZ4 202 aa8.5□□□□□ -1.05
MDC1-201ENST00000376406 SPANXDQ9BXN6 97 aa8.5□□□□□ -1.05
MDC1-201ENST00000376406 F6UB75 175 aa8.5□□□□□ -1.05
MDC1-201ENST00000376406 GAGE6Q13070 117 aa8.5□□□□□ -1.05
MDC1-201ENST00000376406 DNAJC9-AS1A6NH13 148 aa8.49□□□□□ -1.05
MDC1-201ENST00000376406 IGLV1-47P01700 117 aa8.49□□□□□ -1.05
MDC1-201ENST00000376406 SIRPDQ9H106 197 aa8.49□□□□□ -1.05
MDC1-201ENST00000376406 NOP10Q9NPE3 64 aaKnown RBP8.49□□□□□ -1.05
MDC1-201ENST00000376406 NUPR1O60356 82 aa8.49□□□□□ -1.05
MDC1-201ENST00000376406 CRLF1O75462 422 aa8.49□□□□□ -1.05
MDC1-201ENST00000376406 SLURP1P55000 103 aa8.49□□□□□ -1.05
MDC1-201ENST00000376406 LINC00574Q9H8X3 128 aa8.49□□□□□ -1.05
MDC1-201ENST00000376406 SUMO4Q6EEV6 95 aa8.49□□□□□ -1.05
MDC1-201ENST00000376406 IGHV4-31P0DP07 118 aa8.49□□□□□ -1.05
MDC1-201ENST00000376406 IGKV1OR2-108A0A075B7D4 117 aa8.48□□□□□ -1.05
MDC1-201ENST00000376406 SOCS3O14543 225 aa8.48□□□□□ -1.05
MDC1-201ENST00000376406 CRIP3Q6Q6R5 217 aa8.48□□□□□ -1.05
MDC1-201ENST00000376406 WDR87Q6ZQQ6 2873 aa8.48□□□□□ -1.05
MDC1-201ENST00000376406 IGF2RP11717 2491 aa8.48□□□□□ -1.05
MDC1-201ENST00000376406 E7EUB6 86 aa8.48□□□□□ -1.05
MDC1-201ENST00000376406 U3KQE9 123 aa8.48□□□□□ -1.05
MDC1-201ENST00000376406 PIEZO2Q9H5I5 2752 aa8.48□□□□□ -1.05
MDC1-201ENST00000376406 PRSS47A8MTI9 375 aa8.48□□□□□ -1.05
MDC1-201ENST00000376406 BLCAPP62952 87 aa8.47□□□□□ -1.05
MDC1-201ENST00000376406 C14orf177Q52M58 125 aa8.47□□□□□ -1.05
MDC1-201ENST00000376406 UTF1Q5T230 341 aa8.47□□□□□ -1.05
MDC1-201ENST00000376406 Q8N7P7 452 aa8.47□□□□□ -1.05
MDC1-201ENST00000376406 TLN1Q9Y490 2541 aaKnown RBP8.47□□□□□ -1.05
MDC1-201ENST00000376406 MED14OSP0DP75 135 aa8.47□□□□□ -1.05
MDC1-201ENST00000376406 PFN2P35080 140 aa8.47□□□□□ -1.05
MDC1-201ENST00000376406 CTRLP40313 264 aa8.47□□□□□ -1.05
MDC1-201ENST00000376406 DEFB125Q8N687 156 aa8.47□□□□□ -1.05
MDC1-201ENST00000376406 RPL39LQ96EH5 51 aaKnown RBP8.47□□□□□ -1.05
MDC1-201ENST00000376406 NAV2Q8IVL1 2488 aa8.47□□□□□ -1.05
MDC1-201ENST00000376406 A6NDX4 124 aa8.47□□□□□ -1.05
MDC1-201ENST00000376406 H3BQ85 93 aa8.47□□□□□ -1.05
MDC1-201ENST00000376406 PCP2Q8IVA1 136 aa8.47□□□□□ -1.05
MDC1-201ENST00000376406 PLA2G2AP14555 144 aa8.47□□□□□ -1.05
MDC1-201ENST00000376406 SMIM9A6NGZ8 99 aa8.46□□□□□ -1.05
MDC1-201ENST00000376406 GATA1P15976 413 aaPredicted RBP8.46□□□□□ -1.05
MDC1-201ENST00000376406 EIF4EBP1Q13541 118 aaPredicted RBP8.46□□□□□ -1.05
MDC1-201ENST00000376406 Q6YL49 198 aa8.46□□□□□ -1.05
MDC1-201ENST00000376406 H3BMG7 143 aa8.46□□□□□ -1.05
MDC1-201ENST00000376406 DEFB136Q30KP8 78 aa8.46□□□□□ -1.05
MDC1-201ENST00000376406 TRAV12-1A0A0B4J245 112 aa8.46□□□□□ -1.06
MDC1-201ENST00000376406 Q6ZPA2 131 aa8.46□□□□□ -1.06
MDC1-201ENST00000376406 TOMM6Q96B49 74 aa8.46□□□□□ -1.06
MDC1-201ENST00000376406 MSMPQ1L6U9 139 aa8.45□□□□□ -1.06
MDC1-201ENST00000376406 IGHV4OR15-8A0A075B7B6 117 aa8.45□□□□□ -1.06
MDC1-201ENST00000376406 A0A087WW49 117 aa8.45□□□□□ -1.06
MDC1-201ENST00000376406 HERV-K104P63124 156 aa8.45□□□□□ -1.06
MDC1-201ENST00000376406 RNASE13Q5GAN3 156 aaKnown RBP8.45□□□□□ -1.06
MDC1-201ENST00000376406 ZFP36P26651 326 aaKnown RBP8.45□□□□□ -1.06
MDC1-201ENST00000376406 IGKV2D-24A0A075B6R9 120 aa8.45□□□□□ -1.06
MDC1-201ENST00000376406 IGHG4P01861 327 aa8.45□□□□□ -1.06
MDC1-201ENST00000376406 TMEM126AQ9H061 195 aa8.45□□□□□ -1.06
MDC1-201ENST00000376406 MYO9AB2RTY4 2548 aa8.45□□□□□ -1.06
MDC1-201ENST00000376406 C19orf71A6NCJ1 209 aa8.45□□□□□ -1.06
MDC1-201ENST00000376406 LMO4P61968 165 aa8.45□□□□□ -1.06
MDC1-201ENST00000376406 ZFP2Q6ZN57 461 aa8.44□□□□□ -1.06
MDC1-201ENST00000376406 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.44□□□□□ -1.06
MDC1-201ENST00000376406 IGKV2-29A2NJV5 120 aaPredicted RBP8.44□□□□□ -1.06
MDC1-201ENST00000376406 LINC00173Q6ZV60 143 aa8.44□□□□□ -1.06
MDC1-201ENST00000376406 CARD19Q96LW7 228 aa8.44□□□□□ -1.06
MDC1-201ENST00000376406 K7EQD1 137 aa8.44□□□□□ -1.06
MDC1-201ENST00000376406 NRGNQ92686 78 aa8.44□□□□□ -1.06
MDC1-201ENST00000376406 ETDBQ3ZM63 59 aa8.44□□□□□ -1.06
MDC1-201ENST00000376406 IGKV1D-37A0A075B6S9 117 aa8.44□□□□□ -1.06
MDC1-201ENST00000376406 GAGE12HA6NDE8 117 aa8.44□□□□□ -1.06
MDC1-201ENST00000376406 TDRG1Q3Y452 100 aa8.44□□□□□ -1.06
MDC1-201ENST00000376406 SLC25A29Q8N8R3 303 aa8.43□□□□□ -1.06
MDC1-201ENST00000376406 TMEM263Q8WUH6 116 aaKnown RBP8.43□□□□□ -1.06
MDC1-201ENST00000376406 LGALS9O00182 355 aa8.43□□□□□ -1.06
MDC1-201ENST00000376406 ZNF503Q96F45 646 aa8.43□□□□□ -1.06
MDC1-201ENST00000376406 MRPL36Q9P0J6 103 aaKnown RBP8.43□□□□□ -1.06
MDC1-201ENST00000376406 ATP6V0E2Q8NHE4 81 aa8.43□□□□□ -1.06
MDC1-201ENST00000376406 CFC1BP0CG36 223 aa8.43□□□□□ -1.06
MDC1-201ENST00000376406 CFC1P0CG37 223 aa8.43□□□□□ -1.06
MDC1-201ENST00000376406 MBD6Q96DN6 1003 aa8.43□□□□□ -1.06
MDC1-201ENST00000376406 MSRB1Q9NZV6 116 aa8.43□□□□□ -1.06
MDC1-201ENST00000376406 HIGD1BQ9P298 99 aa8.43□□□□□ -1.06
MDC1-201ENST00000376406 PRAC2D3DTV9 90 aa8.43□□□□□ -1.06
MDC1-201ENST00000376406 ODF3Q96PU9 254 aa8.43□□□□□ -1.06
MDC1-201ENST00000376406 ZNF295-AS1Q8N0V1 137 aa8.42□□□□□ -1.06
MDC1-201ENST00000376406 SPRY2O43597 315 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms