RNA–Protein interactions for RNA: ENST00000376266.9

CCHCR1-201, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCHCR1, Length 2,625 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-201ENST00000376266 CFAP161Q6P656 301 aa11.47□□□□□ -0.57
CCHCR1-201ENST00000376266 SCGB3A1Q96QR1 104 aa11.47□□□□□ -0.57
CCHCR1-201ENST00000376266 PRADC1Q9BSG0 188 aa11.47□□□□□ -0.57
CCHCR1-201ENST00000376266 TMEM262E9PQX1 116 aa11.46□□□□□ -0.57
CCHCR1-201ENST00000376266 CFHR4Q92496 578 aa11.46□□□□□ -0.57
CCHCR1-201ENST00000376266 SRSF8Q9BRL6 282 aaKnown RBP11.46□□□□□ -0.57
CCHCR1-201ENST00000376266 TCL1BO95988 128 aa11.46□□□□□ -0.58
CCHCR1-201ENST00000376266 MFAP4P55083 255 aa11.46□□□□□ -0.58
CCHCR1-201ENST00000376266 MINOS1Q5TGZ0 78 aa11.46□□□□□ -0.58
CCHCR1-201ENST00000376266 KIR2DL4Q99706 377 aa11.46□□□□□ -0.58
CCHCR1-201ENST00000376266 MINOS1-NBL1R4GNA1 71 aa11.46□□□□□ -0.58
CCHCR1-201ENST00000376266 IGHG4P01861 327 aa11.45□□□□□ -0.58
CCHCR1-201ENST00000376266 PLEKHB2Q96CS7 222 aa11.45□□□□□ -0.58
CCHCR1-201ENST00000376266 CUBNO60494 3623 aa11.45□□□□□ -0.58
CCHCR1-201ENST00000376266 ANKRD29Q8N6D5 301 aa11.44□□□□□ -0.58
CCHCR1-201ENST00000376266 SMAD5-AS1Q9Y6J3 95 aa11.44□□□□□ -0.58
CCHCR1-201ENST00000376266 TRBV20-1A0A075B6N2 111 aa11.44□□□□□ -0.58
CCHCR1-201ENST00000376266 IGKV3D-20A0A0C4DH25 116 aa11.44□□□□□ -0.58
CCHCR1-201ENST00000376266 SCGB1C2P0DMR2 95 aa11.43□□□□□ -0.58
CCHCR1-201ENST00000376266 NEXN-AS1Q8NBZ9 246 aa11.43□□□□□ -0.58
CCHCR1-201ENST00000376266 PRAC2D3DTV9 90 aa11.43□□□□□ -0.58
CCHCR1-201ENST00000376266 TIMM23O14925 209 aa11.43□□□□□ -0.58
CCHCR1-201ENST00000376266 IGHV3-23P01764 117 aa11.43□□□□□ -0.58
CCHCR1-201ENST00000376266 CD7P09564 240 aa11.43□□□□□ -0.58
CCHCR1-201ENST00000376266 NDUFA11Q86Y39 141 aa11.43□□□□□ -0.58
CCHCR1-201ENST00000376266 SMIM2Q9BVW6 85 aa11.43□□□□□ -0.58
CCHCR1-201ENST00000376266 NSD1Q96L73 2696 aaPredicted RBP11.43□□□□□ -0.58
CCHCR1-201ENST00000376266 ANXA2RQ3ZCQ2 193 aa11.42□□□□□ -0.58
CCHCR1-201ENST00000376266 SPANXN1Q5VSR9 72 aa11.42□□□□□ -0.58
CCHCR1-201ENST00000376266 SBSPONQ8IVN8 264 aa11.42□□□□□ -0.58
CCHCR1-201ENST00000376266 INAFM1C9JVW0 142 aa11.42□□□□□ -0.58
CCHCR1-201ENST00000376266 NHLRC4P0CG21 123 aaPredicted RBP11.42□□□□□ -0.58
CCHCR1-201ENST00000376266 DEFB112Q30KQ8 113 aa11.42□□□□□ -0.58
CCHCR1-201ENST00000376266 ORMDL2Q53FV1 153 aa11.42□□□□□ -0.58
CCHCR1-201ENST00000376266 KLHL30-AS1Q8NEE0 82 aa11.42□□□□□ -0.58
CCHCR1-201ENST00000376266 CITED1Q99966 193 aa11.42□□□□□ -0.58
CCHCR1-201ENST00000376266 C11orf21Q9P2W6 132 aa11.42□□□□□ -0.58
CCHCR1-201ENST00000376266 IGHV3OR16-8A0A075B7F1 116 aa11.41□□□□□ -0.58
CCHCR1-201ENST00000376266 TOMM6Q96B49 74 aa11.41□□□□□ -0.58
CCHCR1-201ENST00000376266 TEP1Q99973 2627 aaKnown RBP11.41□□□□□ -0.58
CCHCR1-201ENST00000376266 GAGE2BQ13066 116 aa11.41□□□□□ -0.58
CCHCR1-201ENST00000376266 GAGE2EQ4V326 116 aa11.41□□□□□ -0.58
CCHCR1-201ENST00000376266 RNF5Q99942 180 aa11.41□□□□□ -0.58
CCHCR1-201ENST00000376266 C21orf62Q9NYP8 219 aa11.41□□□□□ -0.58
CCHCR1-201ENST00000376266 GAGE2DQ9UEU5 116 aa11.41□□□□□ -0.58
CCHCR1-201ENST00000376266 OOSP1A8MZH6 123 aa11.4□□□□□ -0.58
CCHCR1-201ENST00000376266 C9orf139Q6ZV77 190 aa11.4□□□□□ -0.58
CCHCR1-201ENST00000376266 RNF182Q8N6D2 247 aa11.4□□□□□ -0.58
CCHCR1-201ENST00000376266 BAALCQ8WXS3 180 aa11.4□□□□□ -0.58
CCHCR1-201ENST00000376266 FANCD2OSQ96PS1 177 aa11.4□□□□□ -0.58
CCHCR1-201ENST00000376266 TRAV8-2A0A0B4J237 113 aa11.39□□□□□ -0.59
CCHCR1-201ENST00000376266 F8W735 103 aaPredicted RBP11.39□□□□□ -0.59
CCHCR1-201ENST00000376266 RHODO00212 210 aa11.39□□□□□ -0.59
CCHCR1-201ENST00000376266 SNCGO76070 127 aa11.39□□□□□ -0.59
CCHCR1-201ENST00000376266 FN1P02751 2386 aaKnown RBP11.39□□□□□ -0.59
CCHCR1-201ENST00000376266 SRD5A1P18405 259 aa11.39□□□□□ -0.59
CCHCR1-201ENST00000376266 IGHV7-4-1A0A0J9YVY3 117 aa11.39□□□□□ -0.59
CCHCR1-201ENST00000376266 RASL10AQ92737 203 aa11.39□□□□□ -0.59
CCHCR1-201ENST00000376266 IGLV11-55A0A075B6I3 123 aa11.39□□□□□ -0.59
CCHCR1-201ENST00000376266 IGHV3-35A0A0C4DH35 117 aa11.39□□□□□ -0.59
CCHCR1-201ENST00000376266 GAGE12JA6NER3 117 aa11.39□□□□□ -0.59
CCHCR1-201ENST00000376266 NBR2O15453 112 aa11.39□□□□□ -0.59
CCHCR1-201ENST00000376266 GAGE7O76087 117 aa11.39□□□□□ -0.59
CCHCR1-201ENST00000376266 GAGE12FP0CL80 117 aa11.39□□□□□ -0.59
CCHCR1-201ENST00000376266 GAGE12GP0CL81 117 aa11.39□□□□□ -0.59
CCHCR1-201ENST00000376266 GAGE12IP0CL82 117 aa11.39□□□□□ -0.59
CCHCR1-201ENST00000376266 NDUFV3P56181 108 aaKnown RBP11.39□□□□□ -0.59
CCHCR1-201ENST00000376266 GAGE4Q13068 117 aa11.39□□□□□ -0.59
CCHCR1-201ENST00000376266 TTC32Q5I0X7 151 aa11.39□□□□□ -0.59
CCHCR1-201ENST00000376266 TRBV7-9A0A0J9YWB2 115 aa11.38□□□□□ -0.59
CCHCR1-201ENST00000376266 CFC1BP0CG36 223 aa11.38□□□□□ -0.59
CCHCR1-201ENST00000376266 CFC1P0CG37 223 aa11.38□□□□□ -0.59
CCHCR1-201ENST00000376266 SLC25A20O43772 301 aa11.38□□□□□ -0.59
CCHCR1-201ENST00000376266 HES1Q14469 280 aa11.38□□□□□ -0.59
CCHCR1-201ENST00000376266 SHISA2Q6UWI4 295 aa11.38□□□□□ -0.59
CCHCR1-201ENST00000376266 C2orf66Q6UXQ4 117 aa11.38□□□□□ -0.59
CCHCR1-201ENST00000376266 SLC50A1Q9BRV3 221 aa11.38□□□□□ -0.59
CCHCR1-201ENST00000376266 SUMO2P61956 95 aaKnown RBP11.37□□□□□ -0.59
CCHCR1-201ENST00000376266 C10orf126Q8N4M7 172 aa11.37□□□□□ -0.59
CCHCR1-201ENST00000376266 AGPAT4-IT1Q9H0P7 198 aa11.37□□□□□ -0.59
CCHCR1-201ENST00000376266 A0A0J9YY99 117 aa11.37□□□□□ -0.59
CCHCR1-201ENST00000376266 C9JAW5 83 aa11.37□□□□□ -0.59
CCHCR1-201ENST00000376266 CCDC179H3BU77 68 aa11.37□□□□□ -0.59
CCHCR1-201ENST00000376266 H3BUX3 64 aa11.37□□□□□ -0.59
CCHCR1-201ENST00000376266 ASIPP42127 132 aa11.37□□□□□ -0.59
CCHCR1-201ENST00000376266 HERV-K104P63124 156 aa11.37□□□□□ -0.59
CCHCR1-201ENST00000376266 TRAV4A0A0B4J268 109 aa11.36□□□□□ -0.59
CCHCR1-201ENST00000376266 RBAKDNA6NC62 111 aa11.36□□□□□ -0.59
CCHCR1-201ENST00000376266 IGHV4-59P01825 116 aa11.36□□□□□ -0.59
CCHCR1-201ENST00000376266 PRO1854Q9UHT4 67 aa11.36□□□□□ -0.59
CCHCR1-201ENST00000376266 NIPBLQ6KC79 2804 aaeCLIP11.36□□□□□ -0.59
CCHCR1-201ENST00000376266 SCGB2A1O75556 95 aa11.36□□□□□ -0.59
CCHCR1-201ENST00000376266 CTSGP08311 255 aa11.36□□□□□ -0.59
CCHCR1-201ENST00000376266 LY6EQ16553 131 aa11.36□□□□□ -0.59
CCHCR1-201ENST00000376266 IGHV4-4A0A075B6R2 117 aa11.35□□□□□ -0.59
CCHCR1-201ENST00000376266 IFITM1P13164 125 aa11.35□□□□□ -0.59
CCHCR1-201ENST00000376266 HERVK_113P61574 105 aa11.35□□□□□ -0.59
CCHCR1-201ENST00000376266 Q6YL49 198 aa11.35□□□□□ -0.59
CCHCR1-201ENST00000376266 TMEM219Q86XT9 240 aa11.35□□□□□ -0.59
CCHCR1-201ENST00000376266 SMIM20Q8N5G0 67 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms