RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 CENPEQ02224 2701 aa10.5□□□□□ -0.73
MSH5-202ENST00000375740 H3BVH4 76 aa10.5□□□□□ -0.73
MSH5-202ENST00000375740 SPANXN1Q5VSR9 72 aa10.5□□□□□ -0.73
MSH5-202ENST00000375740 SS18L2Q9UHA2 77 aa10.5□□□□□ -0.73
MSH5-202ENST00000375740 UFC1Q9Y3C8 167 aa10.5□□□□□ -0.73
MSH5-202ENST00000375740 TRAV21A0A0B4J279 112 aa10.5□□□□□ -0.73
MSH5-202ENST00000375740 HOXA3O43365 443 aaPredicted RBP10.5□□□□□ -0.73
MSH5-202ENST00000375740 RNASE4P34096 147 aaKnown RBP10.5□□□□□ -0.73
MSH5-202ENST00000375740 ZANQ9Y493 2812 aa10.49□□□□□ -0.73
MSH5-202ENST00000375740 IGHV4-4A0A075B6R2 117 aa10.49□□□□□ -0.73
MSH5-202ENST00000375740 LRRC75A-AS1Q8N1F1 130 aa10.49□□□□□ -0.73
MSH5-202ENST00000375740 Q96MF0 132 aa10.49□□□□□ -0.73
MSH5-202ENST00000375740 ZNF702PQ9H963 129 aa10.49□□□□□ -0.73
MSH5-202ENST00000375740 TRBV7-3A0A075B6L6 115 aa10.49□□□□□ -0.73
MSH5-202ENST00000375740 Q6ZUT4 128 aa10.48□□□□□ -0.73
MSH5-202ENST00000375740 DCANP1Q8TF63 244 aa10.48□□□□□ -0.73
MSH5-202ENST00000375740 CYSLTR1Q9Y271 337 aa10.48□□□□□ -0.73
MSH5-202ENST00000375740 SPRY2O43597 315 aa10.48□□□□□ -0.73
MSH5-202ENST00000375740 TSPAN13O95857 204 aa10.48□□□□□ -0.73
MSH5-202ENST00000375740 ANXA2RQ3ZCQ2 193 aa10.48□□□□□ -0.73
MSH5-202ENST00000375740 CFAP126Q5VTH2 177 aa10.48□□□□□ -0.73
MSH5-202ENST00000375740 ZFP2Q6ZN57 461 aa10.48□□□□□ -0.73
MSH5-202ENST00000375740 C1QTNF4Q9BXJ3 329 aa10.48□□□□□ -0.73
MSH5-202ENST00000375740 ID1P41134 155 aa10.47□□□□□ -0.73
MSH5-202ENST00000375740 PGPEP1Q9NXJ5 209 aa10.47□□□□□ -0.73
MSH5-202ENST00000375740 APRG1Q8IVJ8 170 aa10.47□□□□□ -0.73
MSH5-202ENST00000375740 CARD19Q96LW7 228 aa10.47□□□□□ -0.73
MSH5-202ENST00000375740 PTPN13Q12923 2485 aa10.46□□□□□ -0.73
MSH5-202ENST00000375740 TRAV26-2A0A0B4J265 109 aa10.46□□□□□ -0.73
MSH5-202ENST00000375740 LINC01546A6NGU7 62 aa10.46□□□□□ -0.73
MSH5-202ENST00000375740 IGLV2-18A0A075B6J9 118 aa10.46□□□□□ -0.74
MSH5-202ENST00000375740 GNRH2O43555 120 aa10.46□□□□□ -0.74
MSH5-202ENST00000375740 ELANEP08246 267 aa10.46□□□□□ -0.74
MSH5-202ENST00000375740 LGALS1P09382 135 aaKnown RBP10.46□□□□□ -0.74
MSH5-202ENST00000375740 S100A4P26447 101 aaKnown RBP10.46□□□□□ -0.74
MSH5-202ENST00000375740 SYNJ2BPP57105 145 aa10.46□□□□□ -0.74
MSH5-202ENST00000375740 DUX5Q96PT3 197 aa10.46□□□□□ -0.74
MSH5-202ENST00000375740 NXT2Q9NPJ8 142 aaKnown RBP10.46□□□□□ -0.74
MSH5-202ENST00000375740 IGHV4OR15-8A0A075B7B6 117 aa10.45□□□□□ -0.74
MSH5-202ENST00000375740 A0A087WW49 117 aa10.45□□□□□ -0.74
MSH5-202ENST00000375740 TRBV7-9A0A0J9YWB2 115 aa10.45□□□□□ -0.74
MSH5-202ENST00000375740 ASIPP42127 132 aa10.45□□□□□ -0.74
MSH5-202ENST00000375740 KRTAP1-3Q8IUG1 177 aa10.45□□□□□ -0.74
MSH5-202ENST00000375740 MYOZ3Q8TDC0 251 aa10.45□□□□□ -0.74
MSH5-202ENST00000375740 DOPEY2Q9Y3R5 2298 aa10.45□□□□□ -0.74
MSH5-202ENST00000375740 M0R381 172 aa10.45□□□□□ -0.74
MSH5-202ENST00000375740 ATP5LO75964 103 aa10.45□□□□□ -0.74
MSH5-202ENST00000375740 TAL2Q16559 108 aa10.45□□□□□ -0.74
MSH5-202ENST00000375740 NRACQ8N912 160 aa10.45□□□□□ -0.74
MSH5-202ENST00000375740 PRSS29PA6NIE9 313 aa10.44□□□□□ -0.74
MSH5-202ENST00000375740 PSMB2P49721 201 aa10.44□□□□□ -0.74
MSH5-202ENST00000375740 PRRC2AP48634 2157 aaKnown RBP10.44□□□□□ -0.74
MSH5-202ENST00000375740 LINC01549A6NIU2 74 aa10.44□□□□□ -0.74
MSH5-202ENST00000375740 Q8N8P6 123 aa10.44□□□□□ -0.74
MSH5-202ENST00000375740 UBE2E2Q96LR5 201 aa10.44□□□□□ -0.74
MSH5-202ENST00000375740 ERG28Q9UKR5 140 aa10.44□□□□□ -0.74
MSH5-202ENST00000375740 ABCA12Q86UK0 2595 aa10.44□□□□□ -0.74
MSH5-202ENST00000375740 LOC107984156A0A0G2JMH3 177 aa10.43□□□□□ -0.74
MSH5-202ENST00000375740 ZNF688P0C7X2 276 aa10.43□□□□□ -0.74
MSH5-202ENST00000375740 ARL17AQ8IVW1 177 aa10.43□□□□□ -0.74
MSH5-202ENST00000375740 PHLDA3Q9Y5J5 127 aa10.43□□□□□ -0.74
MSH5-202ENST00000375740 KLLNB2CW77 178 aa10.43□□□□□ -0.74
MSH5-202ENST00000375740 HLA-DRB4P13762 266 aa10.43□□□□□ -0.74
MSH5-202ENST00000375740 PSMG4Q5JS54 123 aa10.43□□□□□ -0.74
MSH5-202ENST00000375740 KIR2DL4Q99706 377 aa10.43□□□□□ -0.74
MSH5-202ENST00000375740 HLA-DRB4X5D2U9 266 aa10.43□□□□□ -0.74
MSH5-202ENST00000375740 EPG5Q9HCE0 2579 aa10.42□□□□□ -0.74
MSH5-202ENST00000375740 A0A087WX48 190 aa10.42□□□□□ -0.74
MSH5-202ENST00000375740 HOXD3P31249 432 aaPredicted RBP10.42□□□□□ -0.74
MSH5-202ENST00000375740 MXRA5Q9NR99 2828 aa10.42□□□□□ -0.74
MSH5-202ENST00000375740 NAV2Q8IVL1 2488 aa10.42□□□□□ -0.74
MSH5-202ENST00000375740 TEX15Q9BXT5 2789 aa10.42□□□□□ -0.74
MSH5-202ENST00000375740 LGALS9O00182 355 aa10.42□□□□□ -0.74
MSH5-202ENST00000375740 RNASE3P12724 160 aaKnown RBP10.42□□□□□ -0.74
MSH5-202ENST00000375740 K7EQG2 157 aa10.41□□□□□ -0.74
MSH5-202ENST00000375740 C14orf178Q8N769 122 aaPredicted RBP10.41□□□□□ -0.74
MSH5-202ENST00000375740 RNF152Q8N8N0 203 aa10.41□□□□□ -0.74
MSH5-202ENST00000375740 DLX4Q92988 240 aaPredicted RBP10.41□□□□□ -0.74
MSH5-202ENST00000375740 MYMXA0A1B0GTQ4 84 aa10.41□□□□□ -0.74
MSH5-202ENST00000375740 MED14OSP0DP75 135 aa10.41□□□□□ -0.74
MSH5-202ENST00000375740 C18orf65Q6ZTR6 163 aa10.41□□□□□ -0.74
MSH5-202ENST00000375740 B5MCH6 92 aa10.41□□□□□ -0.74
MSH5-202ENST00000375740 PLEKHB2Q96CS7 222 aa10.41□□□□□ -0.74
MSH5-202ENST00000375740 TRAV12-3A0A0B4J271 114 aa10.4□□□□□ -0.74
MSH5-202ENST00000375740 OR11H12B2RN74 326 aa10.4□□□□□ -0.74
MSH5-202ENST00000375740 IGKV3-20P01619 116 aa10.4□□□□□ -0.74
MSH5-202ENST00000375740 SNRPD3P62318 126 aaKnown RBP10.4□□□□□ -0.74
MSH5-202ENST00000375740 HIST2H2BCQ6DN03 193 aa10.4□□□□□ -0.74
MSH5-202ENST00000375740 OR11H1Q8NG94 326 aa10.4□□□□□ -0.74
MSH5-202ENST00000375740 OR11H2Q8NH07 326 aa10.4□□□□□ -0.74
MSH5-202ENST00000375740 ATP6V0E2Q8NHE4 81 aa10.4□□□□□ -0.74
MSH5-202ENST00000375740 ANAPC13Q9BS18 74 aa10.4□□□□□ -0.74
MSH5-202ENST00000375740 DPH3P1Q9H4G8 78 aa10.4□□□□□ -0.74
MSH5-202ENST00000375740 A0A0J9YX75 114 aa10.4□□□□□ -0.75
MSH5-202ENST00000375740 LAGE3Q14657 143 aa10.4□□□□□ -0.75
MSH5-202ENST00000375740 FAM159AQ6UWV7 190 aa10.4□□□□□ -0.75
MSH5-202ENST00000375740 Q8N2B8 174 aa10.4□□□□□ -0.75
MSH5-202ENST00000375740 DEFB136Q30KP8 78 aa10.39□□□□□ -0.75
MSH5-202ENST00000375740 SLURP1P55000 103 aa10.39□□□□□ -0.75
MSH5-202ENST00000375740 WFDC11Q8NEX6 87 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms