RNA–Protein interactions for RNA: ENST00000375360.7

PTPDC1-202, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-202ENST00000375360 ZNF80P51504 273 aaPredicted RBP13.72□□□□□ -0.21
PTPDC1-202ENST00000375360 Q6YL49 198 aa13.71□□□□□ -0.21
PTPDC1-202ENST00000375360 RASL10AQ92737 203 aa13.71□□□□□ -0.21
PTPDC1-202ENST00000375360 CLPSL1A2RUU4 121 aa13.71□□□□□ -0.21
PTPDC1-202ENST00000375360 INAFM1C9JVW0 142 aa13.71□□□□□ -0.21
PTPDC1-202ENST00000375360 EREGO14944 169 aa13.71□□□□□ -0.21
PTPDC1-202ENST00000375360 C9orf47Q6ZRZ4 202 aa13.71□□□□□ -0.22
PTPDC1-202ENST00000375360 IGLC3P0DOY3 106 aa13.71□□□□□ -0.22
PTPDC1-202ENST00000375360 LRRC75A-AS1Q8N1F1 130 aa13.71□□□□□ -0.22
PTPDC1-202ENST00000375360 PIFOQ8TCI5 191 aa13.7□□□□□ -0.22
PTPDC1-202ENST00000375360 ATG2AQ2TAZ0 1938 aa13.7□□□□□ -0.22
PTPDC1-202ENST00000375360 ZNF747Q9BV97 191 aa13.7□□□□□ -0.22
PTPDC1-202ENST00000375360 SAMD5Q5TGI4 173 aa13.7□□□□□ -0.22
PTPDC1-202ENST00000375360 CLPSL2Q6UWE3 100 aa13.7□□□□□ -0.22
PTPDC1-202ENST00000375360 TMEM86BQ8N661 226 aa13.69□□□□□ -0.22
PTPDC1-202ENST00000375360 TMEM243Q9BU79 118 aa13.69□□□□□ -0.22
PTPDC1-202ENST00000375360 PAX2Q02962 417 aa13.69□□□□□ -0.22
PTPDC1-202ENST00000375360 C20orf144Q9BQM9 153 aa13.69□□□□□ -0.22
PTPDC1-202ENST00000375360 JPT2Q9H910 190 aa13.69□□□□□ -0.22
PTPDC1-202ENST00000375360 ERG28Q9UKR5 140 aa13.69□□□□□ -0.22
PTPDC1-202ENST00000375360 DEFB4AO15263 64 aa13.69□□□□□ -0.22
PTPDC1-202ENST00000375360 C20orf78Q9BR46 151 aa13.69□□□□□ -0.22
PTPDC1-202ENST00000375360 MDFICQ9P1T7 246 aa13.68□□□□□ -0.22
PTPDC1-202ENST00000375360 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.68□□□□□ -0.22
PTPDC1-202ENST00000375360 IGKV2-29A2NJV5 120 aaPredicted RBP13.68□□□□□ -0.22
PTPDC1-202ENST00000375360 IGLV2-8P01709 118 aa13.68□□□□□ -0.22
PTPDC1-202ENST00000375360 SS18Q15532 418 aa13.68□□□□□ -0.22
PTPDC1-202ENST00000375360 F8VRH5 84 aa13.67□□□□□ -0.22
PTPDC1-202ENST00000375360 CPAMD8Q8IZJ3 1885 aa13.67□□□□□ -0.22
PTPDC1-202ENST00000375360 KIR3DS1Q14943 382 aa13.67□□□□□ -0.22
PTPDC1-202ENST00000375360 BBC3Q96PG8 261 aaPredicted RBP13.67□□□□□ -0.22
PTPDC1-202ENST00000375360 RBMY1BA6NDE4 496 aaKnown RBP13.67□□□□□ -0.22
PTPDC1-202ENST00000375360 RBMY1EA6NEQ0 496 aaKnown RBP13.67□□□□□ -0.22
PTPDC1-202ENST00000375360 RBMY1DP0C7P1 496 aaKnown RBP13.67□□□□□ -0.22
PTPDC1-202ENST00000375360 RBMY1A1P0DJD3 496 aaKnown RBP13.67□□□□□ -0.22
PTPDC1-202ENST00000375360 RBMY1CP0DJD4 496 aa13.67□□□□□ -0.22
PTPDC1-202ENST00000375360 A0A0J9YX75 114 aa13.66□□□□□ -0.22
PTPDC1-202ENST00000375360 C19orf71A6NCJ1 209 aa13.66□□□□□ -0.22
PTPDC1-202ENST00000375360 PRSS29PA6NIE9 313 aa13.66□□□□□ -0.22
PTPDC1-202ENST00000375360 KLF5Q13887 457 aaPredicted RBP13.66□□□□□ -0.22
PTPDC1-202ENST00000375360 LGALS9BQ3B8N2 356 aa13.66□□□□□ -0.22
PTPDC1-202ENST00000375360 C9orf66Q5T8R8 295 aa13.66□□□□□ -0.22
PTPDC1-202ENST00000375360 LGALS9CQ6DKI2 356 aa13.66□□□□□ -0.22
PTPDC1-202ENST00000375360 SUMO4Q6EEV6 95 aa13.66□□□□□ -0.22
PTPDC1-202ENST00000375360 Q6ZSV7 163 aa13.66□□□□□ -0.22
PTPDC1-202ENST00000375360 COL4A2P08572 1712 aa13.66□□□□□ -0.22
PTPDC1-202ENST00000375360 TMEM89A2RUT3 159 aa13.66□□□□□ -0.22
PTPDC1-202ENST00000375360 PFN2P35080 140 aa13.66□□□□□ -0.22
PTPDC1-202ENST00000375360 TDRG1Q3Y452 100 aa13.66□□□□□ -0.22
PTPDC1-202ENST00000375360 COA6Q5JTJ3 125 aaKnown RBP13.66□□□□□ -0.22
PTPDC1-202ENST00000375360 MYMXA0A1B0GTQ4 84 aa13.65□□□□□ -0.22
PTPDC1-202ENST00000375360 C4orf3Q8WVX3 66 aa13.65□□□□□ -0.22
PTPDC1-202ENST00000375360 ZNF493Q6ZR52 646 aa13.65□□□□□ -0.22
PTPDC1-202ENST00000375360 TMEM141Q96I45 108 aa13.65□□□□□ -0.22
PTPDC1-202ENST00000375360 SNHG12Q9BXW3 62 aa13.65□□□□□ -0.22
PTPDC1-202ENST00000375360 F8P00451 2351 aa13.65□□□□□ -0.22
PTPDC1-202ENST00000375360 S100A7L2Q5SY68 101 aa13.64□□□□□ -0.23
PTPDC1-202ENST00000375360 Q8N6K4 173 aa13.64□□□□□ -0.23
PTPDC1-202ENST00000375360 ZFAND3Q9H8U3 227 aa13.64□□□□□ -0.23
PTPDC1-202ENST00000375360 DEFB135Q30KP9 77 aa13.63□□□□□ -0.23
PTPDC1-202ENST00000375360 ADAMTS20P59510 1910 aa13.63□□□□□ -0.23
PTPDC1-202ENST00000375360 ANGP03950 147 aaKnown RBP13.63□□□□□ -0.23
PTPDC1-202ENST00000375360 VPS13AQ96RL7 3174 aa13.63□□□□□ -0.23
PTPDC1-202ENST00000375360 MYCNOSP40205 109 aa13.63□□□□□ -0.23
PTPDC1-202ENST00000375360 ZNF124Q15973 351 aa13.63□□□□□ -0.23
PTPDC1-202ENST00000375360 PGPEP1Q9NXJ5 209 aa13.63□□□□□ -0.23
PTPDC1-202ENST00000375360 A0A1B0GV72 72 aa13.62□□□□□ -0.23
PTPDC1-202ENST00000375360 PSCAO43653 123 aa13.62□□□□□ -0.23
PTPDC1-202ENST00000375360 MLST8Q9BVC4 326 aa13.62□□□□□ -0.23
PTPDC1-202ENST00000375360 USP24Q9UPU5 2620 aa13.61□□□□□ -0.23
PTPDC1-202ENST00000375360 RHOHQ15669 191 aa13.61□□□□□ -0.23
PTPDC1-202ENST00000375360 NXPH4O95158 308 aa13.61□□□□□ -0.23
PTPDC1-202ENST00000375360 RPL39P62891 51 aaKnown RBP13.61□□□□□ -0.23
PTPDC1-202ENST00000375360 DEFB125Q8N687 156 aa13.61□□□□□ -0.23
PTPDC1-202ENST00000375360 SMAD5-AS1Q9Y6J3 95 aa13.6□□□□□ -0.23
PTPDC1-202ENST00000375360 ZNF292O60281 2723 aa13.6□□□□□ -0.23
PTPDC1-202ENST00000375360 GATD1Q8NB37 220 aa13.6□□□□□ -0.23
PTPDC1-202ENST00000375360 C20orf173Q96LM9 149 aa13.6□□□□□ -0.23
PTPDC1-202ENST00000375360 SMR3AQ99954 134 aa13.6□□□□□ -0.23
PTPDC1-202ENST00000375360 Q6ZQT7 251 aa13.6□□□□□ -0.23
PTPDC1-202ENST00000375360 PCP2Q8IVA1 136 aa13.6□□□□□ -0.23
PTPDC1-202ENST00000375360 NDUFA12Q9UI09 145 aa13.6□□□□□ -0.23
PTPDC1-202ENST00000375360 TP53TG3Q9ULZ0 132 aa13.6□□□□□ -0.23
PTPDC1-202ENST00000375360 MAP6D1Q9H9H5 199 aa13.59□□□□□ -0.23
PTPDC1-202ENST00000375360 CRLF1O75462 422 aa13.59□□□□□ -0.23
PTPDC1-202ENST00000375360 SPINK8P0C7L1 97 aa13.59□□□□□ -0.23
PTPDC1-202ENST00000375360 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.59□□□□□ -0.23
PTPDC1-202ENST00000375360 COX8AP10176 69 aa13.59□□□□□ -0.23
PTPDC1-202ENST00000375360 SZT2Q5T011 3432 aa13.59□□□□□ -0.23
PTPDC1-202ENST00000375360 CD5LO43866 347 aa13.58□□□□□ -0.23
PTPDC1-202ENST00000375360 CTRLP40313 264 aa13.58□□□□□ -0.23
PTPDC1-202ENST00000375360 C18orf65Q6ZTR6 163 aa13.58□□□□□ -0.23
PTPDC1-202ENST00000375360 RAI1Q7Z5J4 1906 aaPredicted RBP13.58□□□□□ -0.24
PTPDC1-202ENST00000375360 PLA2G2AP14555 144 aa13.58□□□□□ -0.24
PTPDC1-202ENST00000375360 CST9LQ9H4G1 147 aa13.58□□□□□ -0.24
PTPDC1-202ENST00000375360 BPTFQ12830 3046 aa13.58□□□□□ -0.24
PTPDC1-202ENST00000375360 K7EQG2 157 aa13.58□□□□□ -0.24
PTPDC1-202ENST00000375360 GDF5OSQ5U4N7 250 aa13.58□□□□□ -0.24
PTPDC1-202ENST00000375360 SCGB1A1P11684 91 aa13.57□□□□□ -0.24
PTPDC1-202ENST00000375360 GYPEP15421 78 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms