RNA–Protein interactions for RNA: ENST00000375271.4

PTCH1-202, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-202ENST00000375271 TRBV10-1A0A0K0K1A3 114 aa9.17□□□□□ -0.94
PTCH1-202ENST00000375271 CXorf1O96002 111 aa9.17□□□□□ -0.94
PTCH1-202ENST00000375271 MBP02144 154 aa9.17□□□□□ -0.94
PTCH1-202ENST00000375271 STAG3L2P0CL84 134 aa9.17□□□□□ -0.94
PTCH1-202ENST00000375271 STAG3L3P0CL85 134 aa9.17□□□□□ -0.94
PTCH1-202ENST00000375271 DPH3Q96FX2 82 aa9.17□□□□□ -0.94
PTCH1-202ENST00000375271 IGKV3D-20A0A0C4DH25 116 aa9.16□□□□□ -0.94
PTCH1-202ENST00000375271 USP17L23D6RBM5 183 aa9.16□□□□□ -0.94
PTCH1-202ENST00000375271 INMT-MINDY4F8WBC2 141 aa9.16□□□□□ -0.94
PTCH1-202ENST00000375271 M0R036 132 aa9.16□□□□□ -0.94
PTCH1-202ENST00000375271 M0R381 172 aa9.16□□□□□ -0.94
PTCH1-202ENST00000375271 ARMS2P0C7Q2 107 aa9.16□□□□□ -0.94
PTCH1-202ENST00000375271 H2BFSP57053 126 aa9.16□□□□□ -0.94
PTCH1-202ENST00000375271 ATRAIDQ6UW56 229 aa9.16□□□□□ -0.94
PTCH1-202ENST00000375271 S100ZQ8WXG8 99 aa9.16□□□□□ -0.94
PTCH1-202ENST00000375271 RAB24Q969Q5 203 aa9.16□□□□□ -0.94
PTCH1-202ENST00000375271 CHCHD5Q9BSY4 110 aa9.16□□□□□ -0.94
PTCH1-202ENST00000375271 ARL2-SNX15V9GYD0 113 aa9.16□□□□□ -0.94
PTCH1-202ENST00000375271 TRBV7-3A0A075B6L6 115 aa9.15□□□□□ -0.94
PTCH1-202ENST00000375271 TRAV34A0A0B4J273 112 aa9.15□□□□□ -0.94
PTCH1-202ENST00000375271 DGAT2L7PQ6IED9 249 aa9.15□□□□□ -0.94
PTCH1-202ENST00000375271 ZFP82Q8N141 532 aa9.15□□□□□ -0.94
PTCH1-202ENST00000375271 ACTR3CQ9C0K3 210 aaPredicted RBP9.15□□□□□ -0.94
PTCH1-202ENST00000375271 NDUFA13Q9P0J0 144 aa9.15□□□□□ -0.94
PTCH1-202ENST00000375271 Q9UF83 564 aa9.15□□□□□ -0.94
PTCH1-202ENST00000375271 GRIFINA4D1Z8 144 aa9.14□□□□□ -0.95
PTCH1-202ENST00000375271 ZNF56Q15929 161 aa9.14□□□□□ -0.95
PTCH1-202ENST00000375271 MIAQ16674 131 aa9.14□□□□□ -0.95
PTCH1-202ENST00000375271 UFSP1Q6NVU6 142 aa9.14□□□□□ -0.95
PTCH1-202ENST00000375271 WFDC1Q9HC57 220 aa9.14□□□□□ -0.95
PTCH1-202ENST00000375271 TRBV6-8A0A0A6YYG3 113 aa9.13□□□□□ -0.95
PTCH1-202ENST00000375271 PTTG1O95997 202 aa9.13□□□□□ -0.95
PTCH1-202ENST00000375271 UBE2G1P62253 170 aa9.13□□□□□ -0.95
PTCH1-202ENST00000375271 RPL19P84098 196 aaKnown RBP9.13□□□□□ -0.95
PTCH1-202ENST00000375271 Q6ZRU5 148 aa9.13□□□□□ -0.95
PTCH1-202ENST00000375271 DAZAP1Q96EP5 407 aaKnown RBP9.13□□□□□ -0.95
PTCH1-202ENST00000375271 SFRP2Q96HF1 295 aa9.13□□□□□ -0.95
PTCH1-202ENST00000375271 TMSB15BA0A087X1C1 80 aa9.12□□□□□ -0.95
PTCH1-202ENST00000375271 A0A1W2PRE2 83 aa9.12□□□□□ -0.95
PTCH1-202ENST00000375271 A6NHS1 94 aa9.12□□□□□ -0.95
PTCH1-202ENST00000375271 PEX7O00628 323 aa9.12□□□□□ -0.95
PTCH1-202ENST00000375271 HNRNPA3P51991 378 aaKnown RBP9.12□□□□□ -0.95
PTCH1-202ENST00000375271 UBE2D3P61077 147 aa9.12□□□□□ -0.95
PTCH1-202ENST00000375271 UBE2D2P62837 147 aa9.12□□□□□ -0.95
PTCH1-202ENST00000375271 MPV17L2Q567V2 206 aa9.12□□□□□ -0.95
PTCH1-202ENST00000375271 FAM162BQ5T6X4 162 aa9.12□□□□□ -0.95
PTCH1-202ENST00000375271 Q86TA4 180 aa9.12□□□□□ -0.95
PTCH1-202ENST00000375271 PSMG3Q9BT73 122 aaPredicted RBP9.12□□□□□ -0.95
PTCH1-202ENST00000375271 KRBOX1C9JBD0 128 aa9.11□□□□□ -0.95
PTCH1-202ENST00000375271 UBE2G2P60604 165 aa9.11□□□□□ -0.95
PTCH1-202ENST00000375271 SERF2P84101 59 aa9.11□□□□□ -0.95
PTCH1-202ENST00000375271 TMEM97Q5BJF2 176 aa9.11□□□□□ -0.95
PTCH1-202ENST00000375271 ENHOQ6UWT2 76 aa9.11□□□□□ -0.95
PTCH1-202ENST00000375271 C9orf163Q8N9P6 203 aa9.11□□□□□ -0.95
PTCH1-202ENST00000375271 SUN5Q8TC36 379 aa9.11□□□□□ -0.95
PTCH1-202ENST00000375271 AP5S1Q9NUS5 200 aa9.11□□□□□ -0.95
PTCH1-202ENST00000375271 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.1□□□□□ -0.95
PTCH1-202ENST00000375271 SH2D1AO60880 128 aa9.1□□□□□ -0.95
PTCH1-202ENST00000375271 UPK1BO75841 260 aa9.1□□□□□ -0.95
PTCH1-202ENST00000375271 PRSS1P07477 247 aa9.1□□□□□ -0.95
PTCH1-202ENST00000375271 CLPSL2Q6UWE3 100 aa9.1□□□□□ -0.95
PTCH1-202ENST00000375271 HIST1H2BAQ96A08 127 aa9.1□□□□□ -0.95
PTCH1-202ENST00000375271 NKX6-2Q9C056 277 aaPredicted RBP9.1□□□□□ -0.95
PTCH1-202ENST00000375271 ZFP30Q9Y2G7 519 aa9.1□□□□□ -0.95
PTCH1-202ENST00000375271 F5H697 171 aa9.09□□□□□ -0.95
PTCH1-202ENST00000375271 ATP6V0CP27449 155 aa9.09□□□□□ -0.95
PTCH1-202ENST00000375271 DEFA1P59665 94 aa9.09□□□□□ -0.95
PTCH1-202ENST00000375271 DEFA3P59666 94 aa9.09□□□□□ -0.95
PTCH1-202ENST00000375271 RAB4BP61018 213 aa9.09□□□□□ -0.95
PTCH1-202ENST00000375271 DNLZQ5SXM8 178 aa9.09□□□□□ -0.95
PTCH1-202ENST00000375271 CLRN3Q8NCR9 226 aa9.09□□□□□ -0.95
PTCH1-202ENST00000375271 KRTAP3-3Q9BYR6 98 aa9.09□□□□□ -0.95
PTCH1-202ENST00000375271 KRTAP3-2Q9BYR7 98 aa9.09□□□□□ -0.95
PTCH1-202ENST00000375271 TNFSF18Q9UNG2 199 aa9.09□□□□□ -0.95
PTCH1-202ENST00000375271 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.09□□□□□ -0.95
PTCH1-202ENST00000375271 hDV102S1A0JD36 115 aa9.08□□□□□ -0.96
PTCH1-202ENST00000375271 SMIM17P0DL12 118 aa9.08□□□□□ -0.96
PTCH1-202ENST00000375271 LINC00299Q6ZSB3 139 aa9.08□□□□□ -0.96
PTCH1-202ENST00000375271 OR10G8Q8NGN5 311 aa9.08□□□□□ -0.96
PTCH1-202ENST00000375271 C7orf33Q8WU49 177 aa9.08□□□□□ -0.96
PTCH1-202ENST00000375271 FMC1Q96HJ9 113 aa9.08□□□□□ -0.96
PTCH1-202ENST00000375271 PKHD1L1Q86WI1 4243 aa9.07□□□□□ -0.96
PTCH1-202ENST00000375271 TRBV25-1A0A075B6N4 114 aa9.07□□□□□ -0.96
PTCH1-202ENST00000375271 IGHV3-64A0A075B6Q5 118 aa9.07□□□□□ -0.96
PTCH1-202ENST00000375271 LINC00269Q8N2A0 174 aa9.07□□□□□ -0.96
PTCH1-202ENST00000375271 MARVELD1Q9BSK0 173 aa9.07□□□□□ -0.96
PTCH1-202ENST00000375271 BORCS7-ASMTA0A0B4J1R7 106 aa9.06□□□□□ -0.96
PTCH1-202ENST00000375271 GAGE6Q13070 117 aa9.06□□□□□ -0.96
PTCH1-202ENST00000375271 LINC01559Q495D7 138 aa9.06□□□□□ -0.96
PTCH1-202ENST00000375271 SPANXN1Q5VSR9 72 aa9.06□□□□□ -0.96
PTCH1-202ENST00000375271 NEXN-AS1Q8NBZ9 246 aa9.06□□□□□ -0.96
PTCH1-202ENST00000375271 DERL1Q9BUN8 251 aa9.06□□□□□ -0.96
PTCH1-202ENST00000375271 ZNF471Q9BX82 626 aaPredicted RBP9.06□□□□□ -0.96
PTCH1-202ENST00000375271 CTXND1A0A1B0GTU2 59 aa9.05□□□□□ -0.96
PTCH1-202ENST00000375271 MT1HL1P0DM35 61 aa9.05□□□□□ -0.96
PTCH1-202ENST00000375271 AKR1C8PQ5T2L2 129 aa9.05□□□□□ -0.96
PTCH1-202ENST00000375271 STOML3Q8TAV4 291 aa9.05□□□□□ -0.96
PTCH1-202ENST00000375271 RNF185Q96GF1 192 aa9.05□□□□□ -0.96
PTCH1-202ENST00000375271 IGLV10-54A0A075B6I4 117 aa9.04□□□□□ -0.96
PTCH1-202ENST00000375271 AKR1C3P42330 323 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms