RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 UNQ9165/PRO28630Q6UXU0 137 aa8.36□□□□□ -1.07
CCDC40-203ENST00000374877 TRAV26-1A0A087WT03 109 aa8.36□□□□□ -1.07
CCDC40-203ENST00000374877 CRYGDP07320 174 aa8.36□□□□□ -1.07
CCDC40-203ENST00000374877 CD7P09564 240 aa8.36□□□□□ -1.07
CCDC40-203ENST00000374877 SCGB1C2P0DMR2 95 aa8.36□□□□□ -1.07
CCDC40-203ENST00000374877 A0A0J9YY99 117 aa8.35□□□□□ -1.07
CCDC40-203ENST00000374877 UBE2E1P51965 193 aa8.35□□□□□ -1.07
CCDC40-203ENST00000374877 RPL39P62891 51 aaKnown RBP8.35□□□□□ -1.07
CCDC40-203ENST00000374877 FHL3Q13643 280 aa8.35□□□□□ -1.07
CCDC40-203ENST00000374877 NDUFA11Q86Y39 141 aa8.35□□□□□ -1.07
CCDC40-203ENST00000374877 TCL1BO95988 128 aa8.35□□□□□ -1.07
CCDC40-203ENST00000374877 Q6ZS46 218 aa8.35□□□□□ -1.07
CCDC40-203ENST00000374877 A0A096LNT2 108 aa8.34□□□□□ -1.07
CCDC40-203ENST00000374877 CENPVL3A0A0U1RRI6 287 aa8.34□□□□□ -1.07
CCDC40-203ENST00000374877 F5H697 171 aa8.34□□□□□ -1.07
CCDC40-203ENST00000374877 OVOL1O14753 267 aa8.34□□□□□ -1.07
CCDC40-203ENST00000374877 TRBV12-3P01733 135 aa8.34□□□□□ -1.07
CCDC40-203ENST00000374877 UBE2D3P61077 147 aa8.34□□□□□ -1.07
CCDC40-203ENST00000374877 UBE2D2P62837 147 aa8.34□□□□□ -1.07
CCDC40-203ENST00000374877 GPHB5Q86YW7 130 aa8.34□□□□□ -1.07
CCDC40-203ENST00000374877 IGLV4-69A0A075B6H9 119 aa8.34□□□□□ -1.07
CCDC40-203ENST00000374877 PPP1R17O96001 155 aa8.34□□□□□ -1.07
CCDC40-203ENST00000374877 TSHBP01222 138 aa8.34□□□□□ -1.07
CCDC40-203ENST00000374877 RNASE3P12724 160 aaKnown RBP8.34□□□□□ -1.07
CCDC40-203ENST00000374877 XGP55808 180 aa8.34□□□□□ -1.07
CCDC40-203ENST00000374877 PPDPFLQ8WWR9 84 aa8.34□□□□□ -1.07
CCDC40-203ENST00000374877 AJUBAQ96IF1 538 aa8.34□□□□□ -1.07
CCDC40-203ENST00000374877 JPT2Q9H910 190 aa8.34□□□□□ -1.07
CCDC40-203ENST00000374877 LRRK2Q5S007 2527 aa8.34□□□□□ -1.07
CCDC40-203ENST00000374877 IGHV3OR16-10A0A075B7F0 116 aa8.34□□□□□ -1.07
CCDC40-203ENST00000374877 TRAV41A0A0B4J266 112 aa8.34□□□□□ -1.07
CCDC40-203ENST00000374877 CRYBA4P53673 196 aa8.34□□□□□ -1.07
CCDC40-203ENST00000374877 A0A087WWL8 130 aa8.33□□□□□ -1.08
CCDC40-203ENST00000374877 GATA3P23771 443 aa8.33□□□□□ -1.08
CCDC40-203ENST00000374877 PMVKQ15126 192 aa8.33□□□□□ -1.08
CCDC40-203ENST00000374877 Q6ZUT4 128 aa8.33□□□□□ -1.08
CCDC40-203ENST00000374877 TEN1Q86WV5 123 aa8.33□□□□□ -1.08
CCDC40-203ENST00000374877 CARD19Q96LW7 228 aa8.33□□□□□ -1.08
CCDC40-203ENST00000374877 A8MWV9 139 aa8.33□□□□□ -1.08
CCDC40-203ENST00000374877 B4DSR2 109 aa8.33□□□□□ -1.08
CCDC40-203ENST00000374877 MSMBP08118 114 aa8.33□□□□□ -1.08
CCDC40-203ENST00000374877 TSPEAR-AS2P59090 65 aa8.33□□□□□ -1.08
CCDC40-203ENST00000374877 PAPPA-AS1Q5QFB9 102 aa8.33□□□□□ -1.08
CCDC40-203ENST00000374877 C5orf56Q8N8D9 126 aa8.33□□□□□ -1.08
CCDC40-203ENST00000374877 IGHV3-11P01762 117 aa8.33□□□□□ -1.08
CCDC40-203ENST00000374877 CFC1BP0CG36 223 aa8.33□□□□□ -1.08
CCDC40-203ENST00000374877 CFC1P0CG37 223 aa8.33□□□□□ -1.08
CCDC40-203ENST00000374877 KLK9Q2XQG4 91 aa8.33□□□□□ -1.08
CCDC40-203ENST00000374877 KIR2DL4Q99706 377 aa8.33□□□□□ -1.08
CCDC40-203ENST00000374877 KLK9Q9UKQ9 250 aa8.33□□□□□ -1.08
CCDC40-203ENST00000374877 COL12A1Q99715 3063 aa8.33□□□□□ -1.08
CCDC40-203ENST00000374877 MUC4Q99102 2169 aa8.32□□□□□ -1.08
CCDC40-203ENST00000374877 H7C2G1 150 aa8.32□□□□□ -1.08
CCDC40-203ENST00000374877 SRD5A1P18405 259 aa8.32□□□□□ -1.08
CCDC40-203ENST00000374877 IGHV1-69DA0A0B4J2H0 117 aa8.32□□□□□ -1.08
CCDC40-203ENST00000374877 IGIPA6NJ69 53 aa8.32□□□□□ -1.08
CCDC40-203ENST00000374877 IGHV3-30P01768 117 aa8.32□□□□□ -1.08
CCDC40-203ENST00000374877 IGHV3-30-5P0DP03 117 aa8.32□□□□□ -1.08
CCDC40-203ENST00000374877 FAM74A4Q5TZK3 123 aa8.32□□□□□ -1.08
CCDC40-203ENST00000374877 C10orf126Q8N4M7 172 aa8.32□□□□□ -1.08
CCDC40-203ENST00000374877 RAX2Q96IS3 184 aa8.32□□□□□ -1.08
CCDC40-203ENST00000374877 NPFFO15130 113 aa8.31□□□□□ -1.08
CCDC40-203ENST00000374877 LGALS3P17931 250 aaKnown RBP8.31□□□□□ -1.08
CCDC40-203ENST00000374877 SUMO4Q6EEV6 95 aa8.31□□□□□ -1.08
CCDC40-203ENST00000374877 LINC01356Q8N9X3 169 aa8.31□□□□□ -1.08
CCDC40-203ENST00000374877 ZNF256Q9Y2P7 627 aaPredicted RBP8.31□□□□□ -1.08
CCDC40-203ENST00000374877 TRBV20-1A0A075B6N2 111 aa8.31□□□□□ -1.08
CCDC40-203ENST00000374877 MED14OSP0DP75 135 aa8.31□□□□□ -1.08
CCDC40-203ENST00000374877 ANKRD29Q8N6D5 301 aa8.31□□□□□ -1.08
CCDC40-203ENST00000374877 SDHAF1A6NFY7 115 aa8.3□□□□□ -1.08
CCDC40-203ENST00000374877 FAM223BA6NKX1 122 aa8.3□□□□□ -1.08
CCDC40-203ENST00000374877 SOCS3O14543 225 aa8.3□□□□□ -1.08
CCDC40-203ENST00000374877 FAM159AQ6UWV7 190 aa8.3□□□□□ -1.08
CCDC40-203ENST00000374877 FAM223AQ8IWN6 122 aa8.3□□□□□ -1.08
CCDC40-203ENST00000374877 ZNRF2Q8NHG8 242 aa8.3□□□□□ -1.08
CCDC40-203ENST00000374877 PRO1854Q9UHT4 67 aa8.3□□□□□ -1.08
CCDC40-203ENST00000374877 IGHV3-64A0A075B6Q5 118 aa8.3□□□□□ -1.08
CCDC40-203ENST00000374877 J3QLI3 93 aa8.3□□□□□ -1.08
CCDC40-203ENST00000374877 J3QQQ9 107 aa8.3□□□□□ -1.08
CCDC40-203ENST00000374877 VCYO14598 125 aa8.3□□□□□ -1.08
CCDC40-203ENST00000374877 SLC25A29Q8N8R3 303 aa8.3□□□□□ -1.08
CCDC40-203ENST00000374877 USP9YO00507 2555 aaPredicted RBP8.3□□□□□ -1.08
CCDC40-203ENST00000374877 LINC00315P59091 139 aa8.3□□□□□ -1.08
CCDC40-203ENST00000374877 KRTAP1-3Q8IUG1 177 aa8.3□□□□□ -1.08
CCDC40-203ENST00000374877 ZNF688P0C7X2 276 aa8.29□□□□□ -1.08
CCDC40-203ENST00000374877 POLR2KP53803 58 aaKnown RBP8.29□□□□□ -1.08
CCDC40-203ENST00000374877 MOB4Q9Y3A3 225 aa8.29□□□□□ -1.08
CCDC40-203ENST00000374877 KIF25-AS1Q9Y6Z4 181 aa8.29□□□□□ -1.08
CCDC40-203ENST00000374877 NDUFA4O00483 81 aa8.29□□□□□ -1.08
CCDC40-203ENST00000374877 TMEM141Q96I45 108 aa8.29□□□□□ -1.08
CCDC40-203ENST00000374877 OPRPNQ99935 248 aaPredicted RBP8.29□□□□□ -1.08
CCDC40-203ENST00000374877 TRAV2A0A0B4J234 112 aa8.29□□□□□ -1.08
CCDC40-203ENST00000374877 C9JAW5 83 aa8.29□□□□□ -1.08
CCDC40-203ENST00000374877 IGHV1-69P01742 117 aa8.29□□□□□ -1.08
CCDC40-203ENST00000374877 HIST2H2BCQ6DN03 193 aa8.29□□□□□ -1.08
CCDC40-203ENST00000374877 IGHV4OR15-8A0A075B7B6 117 aa8.28□□□□□ -1.08
CCDC40-203ENST00000374877 A0A087WW49 117 aa8.28□□□□□ -1.08
CCDC40-203ENST00000374877 A4D1N5 150 aa8.28□□□□□ -1.08
CCDC40-203ENST00000374877 TIMM17AQ99595 171 aa8.28□□□□□ -1.08
CCDC40-203ENST00000374877 RHPN1-AS1Q9BWJ2 59 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms