RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 TECTAO75443 2155 aa11.12□□□□□ -0.63
TRAF1-201ENST00000373887 A4D1N5 150 aa11.12□□□□□ -0.63
TRAF1-201ENST00000373887 NCOR1P1Q9H4R4 102 aa11.12□□□□□ -0.63
TRAF1-201ENST00000373887 A0A0J9YXV3 536 aa11.11□□□□□ -0.63
TRAF1-201ENST00000373887 SPTSSBQ8NFR3 76 aa11.11□□□□□ -0.63
TRAF1-201ENST00000373887 KMT2EQ8IZD2 1858 aa11.11□□□□□ -0.63
TRAF1-201ENST00000373887 LINC00173Q6ZV60 143 aa11.11□□□□□ -0.63
TRAF1-201ENST00000373887 CLEC2BQ92478 149 aa11.11□□□□□ -0.63
TRAF1-201ENST00000373887 C16orf74Q96GX8 76 aa11.11□□□□□ -0.63
TRAF1-201ENST00000373887 AJUBAQ96IF1 538 aa11.11□□□□□ -0.63
TRAF1-201ENST00000373887 ATOX1O00244 68 aa11.1□□□□□ -0.63
TRAF1-201ENST00000373887 WFDC11Q8NEX6 87 aa11.1□□□□□ -0.63
TRAF1-201ENST00000373887 FANCD2OSQ96PS1 177 aa11.1□□□□□ -0.63
TRAF1-201ENST00000373887 IGHV7-81A0A0B4J1V7 117 aa11.09□□□□□ -0.63
TRAF1-201ENST00000373887 TM2D2Q9BX73 214 aa11.09□□□□□ -0.63
TRAF1-201ENST00000373887 SPANXCQ9NY87 97 aa11.09□□□□□ -0.63
TRAF1-201ENST00000373887 RPL39P62891 51 aaKnown RBP11.09□□□□□ -0.63
TRAF1-201ENST00000373887 IGKV4-1P06312 121 aa11.09□□□□□ -0.63
TRAF1-201ENST00000373887 LECT2O14960 151 aa11.08□□□□□ -0.63
TRAF1-201ENST00000373887 PKIGQ9Y2B9 76 aa11.08□□□□□ -0.64
TRAF1-201ENST00000373887 H0YGX0 51 aa11.08□□□□□ -0.64
TRAF1-201ENST00000373887 J3KT08 172 aa11.08□□□□□ -0.64
TRAF1-201ENST00000373887 MSRB1Q9NZV6 116 aa11.08□□□□□ -0.64
TRAF1-201ENST00000373887 ATP5G1P05496 136 aa11.08□□□□□ -0.64
TRAF1-201ENST00000373887 SPART-AS1P0CW21 52 aa11.08□□□□□ -0.64
TRAF1-201ENST00000373887 HIGD2BQ4VC39 106 aa11.07□□□□□ -0.64
TRAF1-201ENST00000373887 HIST2H2BDQ6DRA6 164 aa11.07□□□□□ -0.64
TRAF1-201ENST00000373887 CRYGBP07316 175 aa11.07□□□□□ -0.64
TRAF1-201ENST00000373887 DAZAP2Q15038 168 aaPredicted RBP11.07□□□□□ -0.64
TRAF1-201ENST00000373887 IGLV3-1P01715 115 aa11.07□□□□□ -0.64
TRAF1-201ENST00000373887 C10orf91Q5T1B1 145 aa11.07□□□□□ -0.64
TRAF1-201ENST00000373887 H3BUA1 57 aa11.06□□□□□ -0.64
TRAF1-201ENST00000373887 NDUFA1O15239 70 aa11.06□□□□□ -0.64
TRAF1-201ENST00000373887 DAZ2Q13117 558 aaKnown RBP11.06□□□□□ -0.64
TRAF1-201ENST00000373887 ANKRD39Q53RE8 183 aa11.06□□□□□ -0.64
TRAF1-201ENST00000373887 DAZ4Q86SG3 579 aaKnown RBP11.06□□□□□ -0.64
TRAF1-201ENST00000373887 DAZ3Q9NR90 486 aaKnown RBP11.06□□□□□ -0.64
TRAF1-201ENST00000373887 INAFM1C9JVW0 142 aa11.06□□□□□ -0.64
TRAF1-201ENST00000373887 PRR20EP86478 221 aa11.06□□□□□ -0.64
TRAF1-201ENST00000373887 PRR20CP86479 221 aa11.06□□□□□ -0.64
TRAF1-201ENST00000373887 PRR20DP86480 221 aa11.06□□□□□ -0.64
TRAF1-201ENST00000373887 PRR20BP86481 221 aa11.06□□□□□ -0.64
TRAF1-201ENST00000373887 PRR20AP86496 221 aa11.06□□□□□ -0.64
TRAF1-201ENST00000373887 WFDC2Q14508 124 aa11.06□□□□□ -0.64
TRAF1-201ENST00000373887 DEFB125Q8N687 156 aa11.06□□□□□ -0.64
TRAF1-201ENST00000373887 ABCA1O95477 2261 aa11.06□□□□□ -0.64
TRAF1-201ENST00000373887 LGALS9O00182 355 aa11.06□□□□□ -0.64
TRAF1-201ENST00000373887 LINC01620Q4KN68 170 aa11.06□□□□□ -0.64
TRAF1-201ENST00000373887 TTTY13Q9BZ97 58 aa11.06□□□□□ -0.64
TRAF1-201ENST00000373887 SPRY4Q9C004 299 aa11.06□□□□□ -0.64
TRAF1-201ENST00000373887 C5orf56Q8N8D9 126 aa11.05□□□□□ -0.64
TRAF1-201ENST00000373887 MPLKIPQ8TAP9 179 aa11.05□□□□□ -0.64
TRAF1-201ENST00000373887 FAM110AQ9BQ89 295 aa11.05□□□□□ -0.64
TRAF1-201ENST00000373887 DEFB135Q30KP9 77 aa11.04□□□□□ -0.64
TRAF1-201ENST00000373887 ZNF843Q8N446 348 aa11.04□□□□□ -0.64
TRAF1-201ENST00000373887 FXYD2P54710 66 aa11.04□□□□□ -0.64
TRAF1-201ENST00000373887 IGKV2D-26A0A0A0MRZ7 120 aa11.04□□□□□ -0.64
TRAF1-201ENST00000373887 DNAJC9-AS1A6NH13 148 aa11.04□□□□□ -0.64
TRAF1-201ENST00000373887 HHLA3Q9XRX5 114 aa11.04□□□□□ -0.64
TRAF1-201ENST00000373887 NCKAP5O14513 1909 aa11.04□□□□□ -0.64
TRAF1-201ENST00000373887 Q8N7P7 452 aa11.04□□□□□ -0.64
TRAF1-201ENST00000373887 DIRC1Q969H9 104 aa11.04□□□□□ -0.64
TRAF1-201ENST00000373887 PLXNB3Q9ULL4 1909 aa11.04□□□□□ -0.64
TRAF1-201ENST00000373887 TRBV12-3P01733 135 aa11.03□□□□□ -0.64
TRAF1-201ENST00000373887 BDP1A6H8Y1 2624 aa11.03□□□□□ -0.64
TRAF1-201ENST00000373887 Q8N9W7 124 aa11.03□□□□□ -0.64
TRAF1-201ENST00000373887 PTPRQQ9UMZ3 2332 aa11.03□□□□□ -0.64
TRAF1-201ENST00000373887 DEFB1P60022 68 aa11.03□□□□□ -0.64
TRAF1-201ENST00000373887 NUPR1O60356 82 aa11.02□□□□□ -0.64
TRAF1-201ENST00000373887 COL4A4P53420 1690 aaPredicted RBP11.02□□□□□ -0.64
TRAF1-201ENST00000373887 MED13LQ71F56 2210 aa11.02□□□□□ -0.64
TRAF1-201ENST00000373887 DYSFO75923 2080 aa11.02□□□□□ -0.65
TRAF1-201ENST00000373887 FAM208BQ5VWN6 2430 aa11.02□□□□□ -0.65
TRAF1-201ENST00000373887 Q8N1Y9 231 aa11.02□□□□□ -0.65
TRAF1-201ENST00000373887 MSMPQ1L6U9 139 aa11.02□□□□□ -0.65
TRAF1-201ENST00000373887 TDRG1Q3Y452 100 aa11.02□□□□□ -0.65
TRAF1-201ENST00000373887 CASC2Q6XLA1 102 aa11.02□□□□□ -0.65
TRAF1-201ENST00000373887 PRO3102Q9H379 93 aa11.02□□□□□ -0.65
TRAF1-201ENST00000373887 RNF138Q8WVD3 245 aa11.01□□□□□ -0.65
TRAF1-201ENST00000373887 KLK12Q9UKR0 248 aa11.01□□□□□ -0.65
TRAF1-201ENST00000373887 MALRD1Q5VYJ5 2156 aa11.01□□□□□ -0.65
TRAF1-201ENST00000373887 SPAG11BQ08648 103 aa11.01□□□□□ -0.65
TRAF1-201ENST00000373887 NOTCH3Q9UM47 2321 aa11.01□□□□□ -0.65
TRAF1-201ENST00000373887 TRAV23DV6A0A075B6W5 121 aa11.01□□□□□ -0.65
TRAF1-201ENST00000373887 LRCOL1A6NCL2 159 aa11.01□□□□□ -0.65
TRAF1-201ENST00000373887 TEN1Q86WV5 123 aa11.01□□□□□ -0.65
TRAF1-201ENST00000373887 WI2-2373I1.2A0A1W2PRP0 233 aa11□□□□□ -0.65
TRAF1-201ENST00000373887 LINC01545Q5VT33 79 aa11□□□□□ -0.65
TRAF1-201ENST00000373887 MIR7-3HGQ8N6C7 128 aa11□□□□□ -0.65
TRAF1-201ENST00000373887 DENND4AQ7Z401 1863 aa11□□□□□ -0.65
TRAF1-201ENST00000373887 MED13Q9UHV7 2174 aa11□□□□□ -0.65
TRAF1-201ENST00000373887 A0A096LNI7 61 aa11□□□□□ -0.65
TRAF1-201ENST00000373887 MLST8Q9BVC4 326 aa11□□□□□ -0.65
TRAF1-201ENST00000373887 IGKV2-24A0A0C4DH68 120 aa10.99□□□□□ -0.65
TRAF1-201ENST00000373887 SRCAPQ6ZRS2 3230 aa10.99□□□□□ -0.65
TRAF1-201ENST00000373887 TRBV7-3A0A075B6L6 115 aa10.99□□□□□ -0.65
TRAF1-201ENST00000373887 PRAC2D3DTV9 90 aa10.99□□□□□ -0.65
TRAF1-201ENST00000373887 FOXI1Q12951 378 aa10.99□□□□□ -0.65
TRAF1-201ENST00000373887 LTBP2Q14767 1821 aa10.98□□□□□ -0.65
TRAF1-201ENST00000373887 C2orf70A6NJV1 201 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms