RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 KIR2DL4Q99706 377 aa14.3□□□□□ -0.12
TMEM53-202ENST00000372237 CELSR2Q9HCU4 2923 aa14.29□□□□□ -0.12
TMEM53-202ENST00000372237 B4DSR2 109 aa14.29□□□□□ -0.12
TMEM53-202ENST00000372237 PSMB8P28062 276 aa14.29□□□□□ -0.12
TMEM53-202ENST00000372237 SCGB1D4Q6XE38 83 aa14.29□□□□□ -0.12
TMEM53-202ENST00000372237 CSMD2Q7Z408 3487 aa14.29□□□□□ -0.12
TMEM53-202ENST00000372237 LINC01549A6NIU2 74 aa14.29□□□□□ -0.12
TMEM53-202ENST00000372237 ZNF688P0C7X2 276 aa14.29□□□□□ -0.12
TMEM53-202ENST00000372237 VCYO14598 125 aa14.28□□□□□ -0.12
TMEM53-202ENST00000372237 TSHBP01222 138 aa14.28□□□□□ -0.12
TMEM53-202ENST00000372237 CD300EQ496F6 205 aaPredicted RBP14.28□□□□□ -0.12
TMEM53-202ENST00000372237 FAM74A4Q5TZK3 123 aa14.28□□□□□ -0.12
TMEM53-202ENST00000372237 UBR5O95071 2799 aaPredicted RBP14.28□□□□□ -0.12
TMEM53-202ENST00000372237 TEX48A0A1B0GUV7 120 aa14.27□□□□□ -0.12
TMEM53-202ENST00000372237 A0A1B0GWB2 263 aa14.27□□□□□ -0.12
TMEM53-202ENST00000372237 SDHAF1A6NFY7 115 aa14.27□□□□□ -0.12
TMEM53-202ENST00000372237 RRN3P1Q2M238 152 aa14.27□□□□□ -0.12
TMEM53-202ENST00000372237 NRGNQ92686 78 aa14.27□□□□□ -0.12
TMEM53-202ENST00000372237 IGIPA6NJ69 53 aa14.27□□□□□ -0.13
TMEM53-202ENST00000372237 F8W1H4 67 aa14.27□□□□□ -0.13
TMEM53-202ENST00000372237 H3BMG7 143 aa14.27□□□□□ -0.13
TMEM53-202ENST00000372237 RPL39P62891 51 aaKnown RBP14.27□□□□□ -0.13
TMEM53-202ENST00000372237 C11orf86A6NJI1 115 aa14.26□□□□□ -0.13
TMEM53-202ENST00000372237 IGKV3-20P01619 116 aa14.26□□□□□ -0.13
TMEM53-202ENST00000372237 EMP1P54849 157 aa14.26□□□□□ -0.13
TMEM53-202ENST00000372237 PMVKQ15126 192 aa14.26□□□□□ -0.13
TMEM53-202ENST00000372237 PAPPA-AS1Q5QFB9 102 aa14.26□□□□□ -0.13
TMEM53-202ENST00000372237 C10orf99Q6UWK7 81 aa14.26□□□□□ -0.13
TMEM53-202ENST00000372237 ZNF580Q9UK33 172 aa14.26□□□□□ -0.13
TMEM53-202ENST00000372237 IGLV4-69A0A075B6H9 119 aa14.26□□□□□ -0.13
TMEM53-202ENST00000372237 TRAV12-2A0A075B6T6 113 aa14.26□□□□□ -0.13
TMEM53-202ENST00000372237 COX6B1P14854 86 aa14.26□□□□□ -0.13
TMEM53-202ENST00000372237 HOXA3O43365 443 aaPredicted RBP14.25□□□□□ -0.13
TMEM53-202ENST00000372237 IGHV4-59P01825 116 aa14.25□□□□□ -0.13
TMEM53-202ENST00000372237 SNRPD3P62318 126 aaKnown RBP14.25□□□□□ -0.13
TMEM53-202ENST00000372237 AMTNQ6UX39 209 aa14.25□□□□□ -0.13
TMEM53-202ENST00000372237 KLHL30-AS1Q8NEE0 82 aa14.25□□□□□ -0.13
TMEM53-202ENST00000372237 LGALS9O00182 355 aa14.25□□□□□ -0.13
TMEM53-202ENST00000372237 HERVK_113P61574 105 aa14.25□□□□□ -0.13
TMEM53-202ENST00000372237 SRSF9Q13242 221 aaKnown RBP eCLIP14.25□□□□□ -0.13
TMEM53-202ENST00000372237 PLEKHB2Q96CS7 222 aa14.25□□□□□ -0.13
TMEM53-202ENST00000372237 TMEM141Q96I45 108 aa14.25□□□□□ -0.13
TMEM53-202ENST00000372237 IGHV3-16A0A0C4DH30 117 aa14.24□□□□□ -0.13
TMEM53-202ENST00000372237 C9orf85Q96MD7 179 aa14.24□□□□□ -0.13
TMEM53-202ENST00000372237 ODF3Q96PU9 254 aa14.24□□□□□ -0.13
TMEM53-202ENST00000372237 MDFICQ9P1T7 246 aa14.24□□□□□ -0.13
TMEM53-202ENST00000372237 CENPEQ02224 2701 aa14.24□□□□□ -0.13
TMEM53-202ENST00000372237 CSPG4Q6UVK1 2322 aa14.24□□□□□ -0.13
TMEM53-202ENST00000372237 A0A0J9YX75 114 aa14.24□□□□□ -0.13
TMEM53-202ENST00000372237 TRBV27A0A0K0K1C4 114 aa14.24□□□□□ -0.13
TMEM53-202ENST00000372237 TMEM238LA0A1B0GVL6 79 aa14.24□□□□□ -0.13
TMEM53-202ENST00000372237 A6NJY4 79 aa14.24□□□□□ -0.13
TMEM53-202ENST00000372237 WFDC2Q14508 124 aa14.24□□□□□ -0.13
TMEM53-202ENST00000372237 DEFB112Q30KQ8 113 aa14.24□□□□□ -0.13
TMEM53-202ENST00000372237 TIMM17AQ99595 171 aa14.24□□□□□ -0.13
TMEM53-202ENST00000372237 GATA3P23771 443 aa14.23□□□□□ -0.13
TMEM53-202ENST00000372237 ZNF56Q15929 161 aa14.23□□□□□ -0.13
TMEM53-202ENST00000372237 SYT8Q8NBV8 401 aa14.23□□□□□ -0.13
TMEM53-202ENST00000372237 FBN2P35556 2912 aa14.23□□□□□ -0.13
TMEM53-202ENST00000372237 Q8N1Y9 231 aa14.23□□□□□ -0.13
TMEM53-202ENST00000372237 ZNF256Q9Y2P7 627 aaPredicted RBP14.23□□□□□ -0.13
TMEM53-202ENST00000372237 PGPEP1Q9NXJ5 209 aa14.22□□□□□ -0.13
TMEM53-202ENST00000372237 TRBV6-5A0A0K0K1A5 114 aa14.21□□□□□ -0.13
TMEM53-202ENST00000372237 MORN3Q6PF18 240 aaPredicted RBP14.21□□□□□ -0.13
TMEM53-202ENST00000372237 USP9YO00507 2555 aaPredicted RBP14.21□□□□□ -0.13
TMEM53-202ENST00000372237 SPINK13Q1W4C9 94 aa14.21□□□□□ -0.13
TMEM53-202ENST00000372237 TMEM170BQ5T4T1 132 aa14.21□□□□□ -0.13
TMEM53-202ENST00000372237 MRPL16Q9NX20 251 aaKnown RBP14.21□□□□□ -0.13
TMEM53-202ENST00000372237 POLQO75417 2590 aa14.21□□□□□ -0.14
TMEM53-202ENST00000372237 K7EQG2 157 aa14.2□□□□□ -0.14
TMEM53-202ENST00000372237 GAGE13Q4V321 117 aa14.2□□□□□ -0.14
TMEM53-202ENST00000372237 PTPN13Q12923 2485 aa14.2□□□□□ -0.14
TMEM53-202ENST00000372237 IGHV1OR15-1A0A075B7D0 117 aa14.2□□□□□ -0.14
TMEM53-202ENST00000372237 SPANXB1Q9NS25 103 aaPredicted RBP14.2□□□□□ -0.14
TMEM53-202ENST00000372237 M0QY20 66 aa14.19□□□□□ -0.14
TMEM53-202ENST00000372237 SYNJ2BPP57105 145 aa14.19□□□□□ -0.14
TMEM53-202ENST00000372237 TMEM89A2RUT3 159 aa14.19□□□□□ -0.14
TMEM53-202ENST00000372237 ETDBQ3ZM63 59 aa14.19□□□□□ -0.14
TMEM53-202ENST00000372237 MTURNQ8N3F0 131 aa14.19□□□□□ -0.14
TMEM53-202ENST00000372237 ZNF876PQ49A33 203 aa14.18□□□□□ -0.14
TMEM53-202ENST00000372237 ZNRF2Q8NHG8 242 aa14.18□□□□□ -0.14
TMEM53-202ENST00000372237 A0A0J9YY99 117 aa14.18□□□□□ -0.14
TMEM53-202ENST00000372237 DSCR9P59020 149 aa14.18□□□□□ -0.14
TMEM53-202ENST00000372237 SH2D6Q7Z4S9 175 aa14.18□□□□□ -0.14
TMEM53-202ENST00000372237 UBE2D1P51668 147 aa14.17□□□□□ -0.14
TMEM53-202ENST00000372237 TRPT1Q86TN4 253 aaKnown RBP14.17□□□□□ -0.14
TMEM53-202ENST00000372237 J3QR89 54 aa14.16□□□□□ -0.14
TMEM53-202ENST00000372237 LINC01356Q8N9X3 169 aa14.16□□□□□ -0.14
TMEM53-202ENST00000372237 DUX5Q96PT3 197 aa14.16□□□□□ -0.14
TMEM53-202ENST00000372237 TSPEAR-AS2P59090 65 aa14.15□□□□□ -0.14
TMEM53-202ENST00000372237 NSUN5P1Q3KNT7 163 aa14.15□□□□□ -0.14
TMEM53-202ENST00000372237 PRO0461Q9UI25 63 aa14.15□□□□□ -0.14
TMEM53-202ENST00000372237 APOMO95445 188 aa14.15□□□□□ -0.14
TMEM53-202ENST00000372237 RHOHQ15669 191 aa14.15□□□□□ -0.14
TMEM53-202ENST00000372237 ANKRD17O75179 2603 aaKnown RBP14.14□□□□□ -0.15
TMEM53-202ENST00000372237 OPRPNQ99935 248 aaPredicted RBP14.14□□□□□ -0.15
TMEM53-202ENST00000372237 SORL1Q92673 2214 aa14.13□□□□□ -0.15
TMEM53-202ENST00000372237 TSPAN13O95857 204 aa14.13□□□□□ -0.15
TMEM53-202ENST00000372237 TGFAP01135 160 aa14.13□□□□□ -0.15
TMEM53-202ENST00000372237 HOXD3P31249 432 aaPredicted RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms