RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 CLUHP3Q96NS8 147 aa12.1□□□□□ -0.47
GTF3C4-201ENST00000372146 MRPL36Q9P0J6 103 aaKnown RBP12.1□□□□□ -0.47
GTF3C4-201ENST00000372146 ARTNQ5T4W7 220 aa12.09□□□□□ -0.47
GTF3C4-201ENST00000372146 LRP4O75096 1905 aa12.09□□□□□ -0.47
GTF3C4-201ENST00000372146 MBD3L4A6NDZ8 208 aaPredicted RBP12.09□□□□□ -0.47
GTF3C4-201ENST00000372146 MBD3L3A6NE82 208 aaPredicted RBP12.09□□□□□ -0.47
GTF3C4-201ENST00000372146 MBD3L5A6NJ08 208 aaPredicted RBP12.09□□□□□ -0.47
GTF3C4-201ENST00000372146 BPY2O14599 106 aa12.09□□□□□ -0.47
GTF3C4-201ENST00000372146 MBD3L2Q8NHZ7 208 aaPredicted RBP12.09□□□□□ -0.47
GTF3C4-201ENST00000372146 LINC01619G3V211 115 aa12.09□□□□□ -0.47
GTF3C4-201ENST00000372146 COA6Q5JTJ3 125 aaKnown RBP12.09□□□□□ -0.47
GTF3C4-201ENST00000372146 M0QXV9 152 aa12.08□□□□□ -0.48
GTF3C4-201ENST00000372146 GATA1P15976 413 aaPredicted RBP12.08□□□□□ -0.48
GTF3C4-201ENST00000372146 RNF114Q9Y508 228 aa12.08□□□□□ -0.48
GTF3C4-201ENST00000372146 NDUFC1O43677 76 aa12.08□□□□□ -0.48
GTF3C4-201ENST00000372146 GATA4P43694 442 aa12.08□□□□□ -0.48
GTF3C4-201ENST00000372146 CAMK2N2Q96S95 79 aa12.08□□□□□ -0.48
GTF3C4-201ENST00000372146 RIF1Q5UIP0 2472 aaKnown RBP12.08□□□□□ -0.48
GTF3C4-201ENST00000372146 SONP18583 2426 aaKnown RBP12.08□□□□□ -0.48
GTF3C4-201ENST00000372146 CENPVL3A0A0U1RRI6 287 aa12.08□□□□□ -0.48
GTF3C4-201ENST00000372146 COX7A2LO14548 114 aa12.08□□□□□ -0.48
GTF3C4-201ENST00000372146 UBE2AP49459 152 aa12.08□□□□□ -0.48
GTF3C4-201ENST00000372146 WFDC10BQ8IUB3 73 aa12.07□□□□□ -0.48
GTF3C4-201ENST00000372146 C4orf48Q5BLP8 95 aa12.07□□□□□ -0.48
GTF3C4-201ENST00000372146 A0A0J9YWU9 116 aa12.07□□□□□ -0.48
GTF3C4-201ENST00000372146 PRR4Q16378 134 aa12.07□□□□□ -0.48
GTF3C4-201ENST00000372146 NDUFA11Q86Y39 141 aa12.07□□□□□ -0.48
GTF3C4-201ENST00000372146 NUPR1O60356 82 aa12.07□□□□□ -0.48
GTF3C4-201ENST00000372146 C5orf63A6NC05 138 aa12.07□□□□□ -0.48
GTF3C4-201ENST00000372146 SP7Q8TDD2 431 aaPredicted RBP12.07□□□□□ -0.48
GTF3C4-201ENST00000372146 SLX1AQ9BQ83 275 aa12.06□□□□□ -0.48
GTF3C4-201ENST00000372146 LINC00694P0DN24 101 aa12.06□□□□□ -0.48
GTF3C4-201ENST00000372146 PDE6GP18545 87 aa12.06□□□□□ -0.48
GTF3C4-201ENST00000372146 LYPD2Q6UXB3 125 aa12.06□□□□□ -0.48
GTF3C4-201ENST00000372146 A0A0J9YY99 117 aa12.05□□□□□ -0.48
GTF3C4-201ENST00000372146 GGNQ86UU5 652 aa12.05□□□□□ -0.48
GTF3C4-201ENST00000372146 IGLV3-32A0A0A0MS00 114 aa12.05□□□□□ -0.48
GTF3C4-201ENST00000372146 PTPRSQ13332 1948 aa12.05□□□□□ -0.48
GTF3C4-201ENST00000372146 Q8N1Y9 231 aa12.05□□□□□ -0.48
GTF3C4-201ENST00000372146 CCDC179H3BU77 68 aa12.05□□□□□ -0.48
GTF3C4-201ENST00000372146 IL15RAQ13261 267 aa12.05□□□□□ -0.48
GTF3C4-201ENST00000372146 IGLV3-9A0A075B6K5 115 aa12.04□□□□□ -0.48
GTF3C4-201ENST00000372146 DIRC1Q969H9 104 aa12.04□□□□□ -0.48
GTF3C4-201ENST00000372146 DAZ2Q13117 558 aaKnown RBP12.04□□□□□ -0.48
GTF3C4-201ENST00000372146 DAZ4Q86SG3 579 aaKnown RBP12.04□□□□□ -0.48
GTF3C4-201ENST00000372146 DAZ3Q9NR90 486 aaKnown RBP12.04□□□□□ -0.48
GTF3C4-201ENST00000372146 SPATA12Q7Z6I5 190 aa12.04□□□□□ -0.48
GTF3C4-201ENST00000372146 DSCR9P59020 149 aa12.04□□□□□ -0.48
GTF3C4-201ENST00000372146 RPL39P62891 51 aaKnown RBP12.04□□□□□ -0.48
GTF3C4-201ENST00000372146 RUSC1-AS1Q66K80 236 aa12.03□□□□□ -0.48
GTF3C4-201ENST00000372146 ZNF833PQ6ZTB9 187 aa12.03□□□□□ -0.48
GTF3C4-201ENST00000372146 TOMM6Q96B49 74 aa12.03□□□□□ -0.48
GTF3C4-201ENST00000372146 FAM110DQ8TAY7 271 aaPredicted RBP12.03□□□□□ -0.48
GTF3C4-201ENST00000372146 GNLYP22749 145 aa12.03□□□□□ -0.48
GTF3C4-201ENST00000372146 TTC28Q96AY4 2481 aa12.03□□□□□ -0.48
GTF3C4-201ENST00000372146 SCXQ7RTU7 201 aa12.03□□□□□ -0.48
GTF3C4-201ENST00000372146 B4DSR2 109 aa12.02□□□□□ -0.48
GTF3C4-201ENST00000372146 NDUFA4O00483 81 aa12.02□□□□□ -0.48
GTF3C4-201ENST00000372146 ZNF491Q8N8L2 437 aa12.02□□□□□ -0.48
GTF3C4-201ENST00000372146 C17orf77Q96MU5 243 aa12.02□□□□□ -0.48
GTF3C4-201ENST00000372146 WDR90Q96KV7 1748 aa12.02□□□□□ -0.48
GTF3C4-201ENST00000372146 IGHV1-69DA0A0B4J2H0 117 aa12.02□□□□□ -0.48
GTF3C4-201ENST00000372146 C16orf54Q6UWD8 224 aa12.02□□□□□ -0.48
GTF3C4-201ENST00000372146 BLCAPP62952 87 aa12.02□□□□□ -0.49
GTF3C4-201ENST00000372146 K7EQD1 137 aa12.02□□□□□ -0.49
GTF3C4-201ENST00000372146 PINLYPA6NC86 204 aa12.02□□□□□ -0.49
GTF3C4-201ENST00000372146 G3V318 75 aa12.02□□□□□ -0.49
GTF3C4-201ENST00000372146 HRCT1Q6UXD1 115 aa12.02□□□□□ -0.49
GTF3C4-201ENST00000372146 IGKV1-6A0A0C4DH72 117 aa12.01□□□□□ -0.49
GTF3C4-201ENST00000372146 E9PLD3 99 aa12.01□□□□□ -0.49
GTF3C4-201ENST00000372146 LYRM9A8MSI8 78 aa12.01□□□□□ -0.49
GTF3C4-201ENST00000372146 ATP5EP2Q5VTU8 51 aa12.01□□□□□ -0.49
GTF3C4-201ENST00000372146 TTTY13Q9BZ97 58 aa12.01□□□□□ -0.49
GTF3C4-201ENST00000372146 SPRY2O43597 315 aa12.01□□□□□ -0.49
GTF3C4-201ENST00000372146 COL5A1P20908 1838 aaPredicted RBP12□□□□□ -0.49
GTF3C4-201ENST00000372146 K7EM74 188 aa11.99□□□□□ -0.49
GTF3C4-201ENST00000372146 VPREB1P12018 145 aa11.99□□□□□ -0.49
GTF3C4-201ENST00000372146 FGF23Q9GZV9 251 aaPredicted RBP11.99□□□□□ -0.49
GTF3C4-201ENST00000372146 UBE2E1P51965 193 aa11.99□□□□□ -0.49
GTF3C4-201ENST00000372146 FLG2Q5D862 2391 aaPredicted RBP11.99□□□□□ -0.49
GTF3C4-201ENST00000372146 GYPEP15421 78 aa11.99□□□□□ -0.49
GTF3C4-201ENST00000372146 LINC01356Q8N9X3 169 aa11.99□□□□□ -0.49
GTF3C4-201ENST00000372146 HOXB4P17483 251 aaPredicted RBP11.99□□□□□ -0.49
GTF3C4-201ENST00000372146 MYO18BQ8IUG5 2567 aa11.98□□□□□ -0.49
GTF3C4-201ENST00000372146 TM2D2Q9BX73 214 aa11.98□□□□□ -0.49
GTF3C4-201ENST00000372146 LY6HO94772 140 aa11.98□□□□□ -0.49
GTF3C4-201ENST00000372146 C11orf86A6NJI1 115 aa11.98□□□□□ -0.49
GTF3C4-201ENST00000372146 ODF1Q14990 250 aa11.98□□□□□ -0.49
GTF3C4-201ENST00000372146 A0A0J9YXV3 536 aa11.98□□□□□ -0.49
GTF3C4-201ENST00000372146 IGHV7-4-1A0A0J9YVY3 117 aa11.98□□□□□ -0.49
GTF3C4-201ENST00000372146 IGHV4-30-2A0A087WSY4 118 aa11.98□□□□□ -0.49
GTF3C4-201ENST00000372146 WT1-ASQ06250 92 aa11.98□□□□□ -0.49
GTF3C4-201ENST00000372146 SERP2Q8N6R1 65 aa11.98□□□□□ -0.49
GTF3C4-201ENST00000372146 TPSG1Q9NRR2 321 aa11.98□□□□□ -0.49
GTF3C4-201ENST00000372146 MIR7-3HGQ8N6C7 128 aa11.97□□□□□ -0.49
GTF3C4-201ENST00000372146 IGLV2-23P01705 113 aa11.97□□□□□ -0.49
GTF3C4-201ENST00000372146 PIFOQ8TCI5 191 aa11.97□□□□□ -0.49
GTF3C4-201ENST00000372146 NPBQ8NG41 125 aa11.97□□□□□ -0.49
GTF3C4-201ENST00000372146 RAI1Q7Z5J4 1906 aaPredicted RBP11.96□□□□□ -0.49
GTF3C4-201ENST00000372146 PRR20EP86478 221 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms