RNA–Protein interactions for RNA: ENST00000371748.9

LHX3-202, Transcript of LIM homeobox 3, humanhuman

TSL 1 (best) BASIC

Gene LHX3, Length 2,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-202ENST00000371748 ZMAT4Q9H898 229 aa14.78□□□□□ -0.04
LHX3-202ENST00000371748 TRAV12-2A0A075B6T6 113 aa14.77□□□□□ -0.04
LHX3-202ENST00000371748 A0A1W2PPM0 123 aa14.77□□□□□ -0.04
LHX3-202ENST00000371748 ODF1Q14990 250 aa14.77□□□□□ -0.04
LHX3-202ENST00000371748 C11orf44Q8N8P7 122 aa14.77□□□□□ -0.04
LHX3-202ENST00000371748 LEPP41159 167 aa14.77□□□□□ -0.05
LHX3-202ENST00000371748 FAM159AQ6UWV7 190 aa14.77□□□□□ -0.05
LHX3-202ENST00000371748 DLX4Q92988 240 aaPredicted RBP14.77□□□□□ -0.05
LHX3-202ENST00000371748 MUC4Q99102 2169 aa14.77□□□□□ -0.05
LHX3-202ENST00000371748 GCN1Q92616 2671 aaKnown RBP14.76□□□□□ -0.05
LHX3-202ENST00000371748 G3V4G9 280 aa14.76□□□□□ -0.05
LHX3-202ENST00000371748 FCER1GP30273 86 aa14.76□□□□□ -0.05
LHX3-202ENST00000371748 NEGR1Q7Z3B1 354 aa14.76□□□□□ -0.05
LHX3-202ENST00000371748 NRACQ8N912 160 aa14.75□□□□□ -0.05
LHX3-202ENST00000371748 TTTY13Q9BZ97 58 aa14.75□□□□□ -0.05
LHX3-202ENST00000371748 MED14OSP0DP75 135 aa14.75□□□□□ -0.05
LHX3-202ENST00000371748 SPINK13Q1W4C9 94 aa14.75□□□□□ -0.05
LHX3-202ENST00000371748 C14orf178Q8N769 122 aaPredicted RBP14.75□□□□□ -0.05
LHX3-202ENST00000371748 PEMTQ9UBM1 199 aa14.75□□□□□ -0.05
LHX3-202ENST00000371748 SPCS1Q9Y6A9 102 aa14.75□□□□□ -0.05
LHX3-202ENST00000371748 ODF3Q96PU9 254 aa14.74□□□□□ -0.05
LHX3-202ENST00000371748 NXT2Q9NPJ8 142 aaKnown RBP14.74□□□□□ -0.05
LHX3-202ENST00000371748 FASNP49327 2511 aaKnown RBP14.74□□□□□ -0.05
LHX3-202ENST00000371748 RIPPLY3P57055 190 aa14.74□□□□□ -0.05
LHX3-202ENST00000371748 CD7P09564 240 aa14.73□□□□□ -0.05
LHX3-202ENST00000371748 FXYD2P54710 66 aa14.73□□□□□ -0.05
LHX3-202ENST00000371748 OR5A1Q8NGJ0 315 aa14.73□□□□□ -0.05
LHX3-202ENST00000371748 HIGD1BQ9P298 99 aa14.73□□□□□ -0.05
LHX3-202ENST00000371748 MTORP42345 2549 aa14.73□□□□□ -0.05
LHX3-202ENST00000371748 A0A1W2PRX2 142 aa14.73□□□□□ -0.05
LHX3-202ENST00000371748 FOXI2Q6ZQN5 318 aa14.73□□□□□ -0.05
LHX3-202ENST00000371748 TMEM61Q8N0U2 210 aa14.73□□□□□ -0.05
LHX3-202ENST00000371748 DPH3P1Q9H4G8 78 aa14.72□□□□□ -0.05
LHX3-202ENST00000371748 IGLV2-18A0A075B6J9 118 aa14.71□□□□□ -0.05
LHX3-202ENST00000371748 PRSS1P07477 247 aa14.71□□□□□ -0.05
LHX3-202ENST00000371748 GCSHP23434 173 aa14.71□□□□□ -0.05
LHX3-202ENST00000371748 Q8N8P6 123 aa14.71□□□□□ -0.05
LHX3-202ENST00000371748 KNCNA6PVL3 124 aa14.71□□□□□ -0.05
LHX3-202ENST00000371748 DUSP14O95147 198 aaKnown RBP14.71□□□□□ -0.05
LHX3-202ENST00000371748 IGKCP01834 107 aa14.71□□□□□ -0.05
LHX3-202ENST00000371748 SMIM13P0DJ93 91 aa14.71□□□□□ -0.05
LHX3-202ENST00000371748 DEFB131AP59861 70 aa14.71□□□□□ -0.05
LHX3-202ENST00000371748 SAMD5Q5TGI4 173 aa14.71□□□□□ -0.05
LHX3-202ENST00000371748 TMEM158Q8WZ71 300 aa14.71□□□□□ -0.05
LHX3-202ENST00000371748 MGPP08493 103 aa14.7□□□□□ -0.06
LHX3-202ENST00000371748 CD28P10747 220 aa14.7□□□□□ -0.06
LHX3-202ENST00000371748 MRAP2Q96G30 205 aa14.7□□□□□ -0.06
LHX3-202ENST00000371748 FABP2P12104 132 aa14.7□□□□□ -0.06
LHX3-202ENST00000371748 DYNLRB2Q8TF09 96 aa14.7□□□□□ -0.06
LHX3-202ENST00000371748 RAX2Q96IS3 184 aa14.7□□□□□ -0.06
LHX3-202ENST00000371748 CHAC1Q9BUX1 264 aa14.7□□□□□ -0.06
LHX3-202ENST00000371748 WNK1Q9H4A3 2382 aa14.7□□□□□ -0.06
LHX3-202ENST00000371748 TRBV25-1A0A075B6N4 114 aa14.69□□□□□ -0.06
LHX3-202ENST00000371748 AMTNQ6UX39 209 aa14.69□□□□□ -0.06
LHX3-202ENST00000371748 SMR3AQ99954 134 aa14.69□□□□□ -0.06
LHX3-202ENST00000371748 GTSCR1Q86UQ5 136 aa14.69□□□□□ -0.06
LHX3-202ENST00000371748 HECTD1Q9ULT8 2610 aa14.68□□□□□ -0.06
LHX3-202ENST00000371748 ZC2HC1BQ5TFG8 222 aa14.68□□□□□ -0.06
LHX3-202ENST00000371748 PHLDA1Q8WV24 401 aaPredicted RBP14.68□□□□□ -0.06
LHX3-202ENST00000371748 NXPH4O95158 308 aa14.68□□□□□ -0.06
LHX3-202ENST00000371748 JPT2Q9H910 190 aa14.68□□□□□ -0.06
LHX3-202ENST00000371748 PRSS47A8MTI9 375 aa14.67□□□□□ -0.06
LHX3-202ENST00000371748 K7ERJ3 54 aa14.67□□□□□ -0.06
LHX3-202ENST00000371748 RNASE1P07998 156 aaKnown RBP14.67□□□□□ -0.06
LHX3-202ENST00000371748 RASL10AQ92737 203 aa14.67□□□□□ -0.06
LHX3-202ENST00000371748 RPL39LQ96EH5 51 aaKnown RBP14.67□□□□□ -0.06
LHX3-202ENST00000371748 MDFICQ9P1T7 246 aa14.67□□□□□ -0.06
LHX3-202ENST00000371748 SETD2Q9BYW2 2564 aaPredicted RBP14.67□□□□□ -0.06
LHX3-202ENST00000371748 DPM2O94777 84 aa14.67□□□□□ -0.06
LHX3-202ENST00000371748 DEFB114Q30KQ6 69 aa14.67□□□□□ -0.06
LHX3-202ENST00000371748 Q8N1Y9 231 aa14.67□□□□□ -0.06
LHX3-202ENST00000371748 LINC01006Q8NI28 216 aa14.67□□□□□ -0.06
LHX3-202ENST00000371748 IGHV3-16A0A0C4DH30 117 aa14.66□□□□□ -0.06
LHX3-202ENST00000371748 ATP5LO75964 103 aa14.66□□□□□ -0.06
LHX3-202ENST00000371748 SMIM17P0DL12 118 aa14.66□□□□□ -0.06
LHX3-202ENST00000371748 CITED2Q99967 270 aaPredicted RBP14.66□□□□□ -0.06
LHX3-202ENST00000371748 IGHV1OR15-1A0A075B7D0 117 aa14.66□□□□□ -0.06
LHX3-202ENST00000371748 CD300EQ496F6 205 aaPredicted RBP14.66□□□□□ -0.06
LHX3-202ENST00000371748 TM2D2Q9BX73 214 aa14.66□□□□□ -0.06
LHX3-202ENST00000371748 HLA-DRB4P13762 266 aa14.65□□□□□ -0.07
LHX3-202ENST00000371748 MRPL35Q9NZE8 188 aaKnown RBP14.65□□□□□ -0.07
LHX3-202ENST00000371748 KIF25-AS1Q9Y6Z4 181 aa14.65□□□□□ -0.07
LHX3-202ENST00000371748 HLA-DRB4X5D2U9 266 aa14.65□□□□□ -0.07
LHX3-202ENST00000371748 CCL24O00175 119 aa14.64□□□□□ -0.07
LHX3-202ENST00000371748 RBMY1A1P0DJD3 496 aaKnown RBP14.64□□□□□ -0.07
LHX3-202ENST00000371748 RBMY1CP0DJD4 496 aa14.64□□□□□ -0.07
LHX3-202ENST00000371748 LAGE3Q14657 143 aa14.64□□□□□ -0.07
LHX3-202ENST00000371748 RBMY1FQ15415 496 aaKnown RBP14.64□□□□□ -0.07
LHX3-202ENST00000371748 CEND1Q8N111 149 aa14.64□□□□□ -0.07
LHX3-202ENST00000371748 C9orf85Q96MD7 179 aa14.64□□□□□ -0.07
LHX3-202ENST00000371748 SMIM2Q9BVW6 85 aa14.64□□□□□ -0.07
LHX3-202ENST00000371748 MAP6D1Q9H9H5 199 aa14.64□□□□□ -0.07
LHX3-202ENST00000371748 TMEM160Q9NX00 188 aa14.64□□□□□ -0.07
LHX3-202ENST00000371748 TRAV2A0A0B4J234 112 aa14.63□□□□□ -0.07
LHX3-202ENST00000371748 RBMY1BA6NDE4 496 aaKnown RBP14.63□□□□□ -0.07
LHX3-202ENST00000371748 RBMY1EA6NEQ0 496 aaKnown RBP14.63□□□□□ -0.07
LHX3-202ENST00000371748 H3BMM0 161 aa14.63□□□□□ -0.07
LHX3-202ENST00000371748 RBMY1DP0C7P1 496 aaKnown RBP14.63□□□□□ -0.07
LHX3-202ENST00000371748 FHL3Q13643 280 aa14.63□□□□□ -0.07
LHX3-202ENST00000371748 NHP2Q9NX24 153 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 151.5 ms