RNA–Protein interactions for RNA: ENST00000371429.3

NDC1-201, Transcript of NDC1 transmembrane nucleoporin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDC1, Length 5,134 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC1-201ENST00000371429 GATA1P15976 413 aaPredicted RBP11.31□□□□□ -0.6
NDC1-201ENST00000371429 SUMO4Q6EEV6 95 aa11.31□□□□□ -0.6
NDC1-201ENST00000371429 NDUFS6O75380 124 aaKnown RBP11.3□□□□□ -0.6
NDC1-201ENST00000371429 DEFB125Q8N687 156 aa11.3□□□□□ -0.6
NDC1-201ENST00000371429 K7EMI3 77 aa11.3□□□□□ -0.6
NDC1-201ENST00000371429 HHLA3Q9XRX5 114 aa11.3□□□□□ -0.6
NDC1-201ENST00000371429 TLN2Q9Y4G6 2542 aa11.3□□□□□ -0.6
NDC1-201ENST00000371429 IGLV10-54A0A075B6I4 117 aa11.3□□□□□ -0.6
NDC1-201ENST00000371429 J3QQQ9 107 aa11.3□□□□□ -0.6
NDC1-201ENST00000371429 AMTNQ6UX39 209 aa11.3□□□□□ -0.6
NDC1-201ENST00000371429 IGF1P05019 195 aa11.29□□□□□ -0.6
NDC1-201ENST00000371429 MTURNQ8N3F0 131 aa11.29□□□□□ -0.6
NDC1-201ENST00000371429 SPANXA1Q9NS26 97 aa11.29□□□□□ -0.6
NDC1-201ENST00000371429 LY6G6DO95868 133 aa11.29□□□□□ -0.6
NDC1-201ENST00000371429 DAZ2Q13117 558 aaKnown RBP11.29□□□□□ -0.6
NDC1-201ENST00000371429 DAZ4Q86SG3 579 aaKnown RBP11.29□□□□□ -0.6
NDC1-201ENST00000371429 DAZ3Q9NR90 486 aaKnown RBP11.29□□□□□ -0.6
NDC1-201ENST00000371429 MSRB1Q9NZV6 116 aa11.29□□□□□ -0.6
NDC1-201ENST00000371429 PROP1O75360 226 aa11.29□□□□□ -0.6
NDC1-201ENST00000371429 RPL39LQ96EH5 51 aaKnown RBP11.29□□□□□ -0.6
NDC1-201ENST00000371429 SCRT2Q9NQ03 307 aa11.29□□□□□ -0.6
NDC1-201ENST00000371429 PLA2G2AP14555 144 aa11.29□□□□□ -0.6
NDC1-201ENST00000371429 CCDC140Q96MF4 163 aa11.28□□□□□ -0.6
NDC1-201ENST00000371429 SPTBN4Q9H254 2564 aa11.28□□□□□ -0.6
NDC1-201ENST00000371429 A0A0J9YX75 114 aa11.28□□□□□ -0.6
NDC1-201ENST00000371429 ZNF462Q96JM2 2506 aa11.28□□□□□ -0.6
NDC1-201ENST00000371429 UTF1Q5T230 341 aa11.28□□□□□ -0.6
NDC1-201ENST00000371429 SHISA2Q6UWI4 295 aa11.28□□□□□ -0.6
NDC1-201ENST00000371429 ZNF664Q8N3J9 261 aa11.28□□□□□ -0.6
NDC1-201ENST00000371429 C10orf142B7Z368 130 aa11.27□□□□□ -0.6
NDC1-201ENST00000371429 Q6ZSV7 163 aa11.27□□□□□ -0.6
NDC1-201ENST00000371429 MAP6D1Q9H9H5 199 aa11.27□□□□□ -0.6
NDC1-201ENST00000371429 LYPD6BQ8NI32 183 aa11.27□□□□□ -0.6
NDC1-201ENST00000371429 ZNF503Q96F45 646 aa11.27□□□□□ -0.61
NDC1-201ENST00000371429 CAMK2N2Q96S95 79 aa11.27□□□□□ -0.61
NDC1-201ENST00000371429 ABCA12Q86UK0 2595 aa11.27□□□□□ -0.61
NDC1-201ENST00000371429 C9JAW5 83 aa11.27□□□□□ -0.61
NDC1-201ENST00000371429 KMT2EQ8IZD2 1858 aa11.27□□□□□ -0.61
NDC1-201ENST00000371429 HIST1H4AP62805 103 aaKnown RBP11.26□□□□□ -0.61
NDC1-201ENST00000371429 C20orf144Q9BQM9 153 aa11.26□□□□□ -0.61
NDC1-201ENST00000371429 PKIGQ9Y2B9 76 aa11.26□□□□□ -0.61
NDC1-201ENST00000371429 PCNX3Q9H6A9 2034 aa11.26□□□□□ -0.61
NDC1-201ENST00000371429 C10orf91Q5T1B1 145 aa11.26□□□□□ -0.61
NDC1-201ENST00000371429 TAL2Q16559 108 aa11.26□□□□□ -0.61
NDC1-201ENST00000371429 IGLL5B9A064 214 aa11.26□□□□□ -0.61
NDC1-201ENST00000371429 SLC25A29Q8N8R3 303 aa11.26□□□□□ -0.61
NDC1-201ENST00000371429 IL17DQ8TAD2 202 aa11.25□□□□□ -0.61
NDC1-201ENST00000371429 TRBV7-3A0A075B6L6 115 aa11.25□□□□□ -0.61
NDC1-201ENST00000371429 IGLC2P0DOY2 106 aa11.25□□□□□ -0.61
NDC1-201ENST00000371429 Q6ZWC4 215 aa11.25□□□□□ -0.61
NDC1-201ENST00000371429 DKK2Q9UBU2 259 aa11.25□□□□□ -0.61
NDC1-201ENST00000371429 CEP192Q8TEP8 1941 aa11.25□□□□□ -0.61
NDC1-201ENST00000371429 USP9XQ93008 2570 aaPredicted RBP11.25□□□□□ -0.61
NDC1-201ENST00000371429 TMEM263Q8WUH6 116 aaKnown RBP11.24□□□□□ -0.61
NDC1-201ENST00000371429 BOD1L2Q8IYS8 172 aa11.24□□□□□ -0.61
NDC1-201ENST00000371429 Q9H8V8 135 aa11.24□□□□□ -0.61
NDC1-201ENST00000371429 POLR3KQ9Y2Y1 108 aaPredicted RBP11.24□□□□□ -0.61
NDC1-201ENST00000371429 COX7A2LO14548 114 aa11.24□□□□□ -0.61
NDC1-201ENST00000371429 RPL18AQ02543 176 aaKnown RBP11.24□□□□□ -0.61
NDC1-201ENST00000371429 TRAV13-2A0A0B4J235 113 aa11.23□□□□□ -0.61
NDC1-201ENST00000371429 GAGE2AQ6NT46 116 aa11.23□□□□□ -0.61
NDC1-201ENST00000371429 RPL32P62910 135 aaKnown RBP11.23□□□□□ -0.61
NDC1-201ENST00000371429 PRO0255Q9UI72 69 aa11.23□□□□□ -0.61
NDC1-201ENST00000371429 FASNP49327 2511 aaKnown RBP11.23□□□□□ -0.61
NDC1-201ENST00000371429 ZFP2Q6ZN57 461 aa11.23□□□□□ -0.61
NDC1-201ENST00000371429 C11orf45Q8TAV5 145 aa11.23□□□□□ -0.61
NDC1-201ENST00000371429 TM2D2Q9BX73 214 aa11.23□□□□□ -0.61
NDC1-201ENST00000371429 ZNF106Q9H2Y7 1883 aaKnown RBP11.22□□□□□ -0.61
NDC1-201ENST00000371429 TNRC6AQ8NDV7 1962 aaKnown RBP11.22□□□□□ -0.61
NDC1-201ENST00000371429 EBI3Q14213 229 aa11.22□□□□□ -0.61
NDC1-201ENST00000371429 ZNF747Q9BV97 191 aa11.22□□□□□ -0.61
NDC1-201ENST00000371429 CDSNQ15517 529 aa11.22□□□□□ -0.61
NDC1-201ENST00000371429 KIAA1549LQ6ZVL6 1849 aa11.22□□□□□ -0.61
NDC1-201ENST00000371429 LGALS9O00182 355 aa11.22□□□□□ -0.61
NDC1-201ENST00000371429 DEFB114Q30KQ6 69 aa11.22□□□□□ -0.61
NDC1-201ENST00000371429 MDFICQ9P1T7 246 aa11.22□□□□□ -0.61
NDC1-201ENST00000371429 LRRK2Q5S007 2527 aa11.21□□□□□ -0.61
NDC1-201ENST00000371429 IGKV1D-37A0A075B6S9 117 aa11.21□□□□□ -0.61
NDC1-201ENST00000371429 P0C879 139 aa11.21□□□□□ -0.61
NDC1-201ENST00000371429 IGLL1P15814 213 aa11.21□□□□□ -0.61
NDC1-201ENST00000371429 COX8AP10176 69 aa11.21□□□□□ -0.61
NDC1-201ENST00000371429 VSIG2Q96IQ7 327 aa11.21□□□□□ -0.61
NDC1-201ENST00000371429 FGF6P10767 208 aa11.21□□□□□ -0.62
NDC1-201ENST00000371429 BRWD1-AS2P59051 145 aa11.21□□□□□ -0.62
NDC1-201ENST00000371429 GAGE2EQ4V326 116 aa11.21□□□□□ -0.62
NDC1-201ENST00000371429 GAGE2DQ9UEU5 116 aa11.21□□□□□ -0.62
NDC1-201ENST00000371429 SOCS3O14543 225 aa11.2□□□□□ -0.62
NDC1-201ENST00000371429 MED14OSP0DP75 135 aa11.2□□□□□ -0.62
NDC1-201ENST00000371429 OCIAD2Q56VL3 154 aa11.2□□□□□ -0.62
NDC1-201ENST00000371429 KLK12Q9UKR0 248 aa11.2□□□□□ -0.62
NDC1-201ENST00000371429 A0A0J9YXV3 536 aa11.2□□□□□ -0.62
NDC1-201ENST00000371429 Q6ZPA2 131 aa11.2□□□□□ -0.62
NDC1-201ENST00000371429 C1orf229Q6ZS94 237 aaPredicted RBP11.2□□□□□ -0.62
NDC1-201ENST00000371429 TRAV4A0A0B4J268 109 aa11.2□□□□□ -0.62
NDC1-201ENST00000371429 LY6LH3BQJ8 138 aa11.2□□□□□ -0.62
NDC1-201ENST00000371429 PRO1854Q9UHT4 67 aa11.2□□□□□ -0.62
NDC1-201ENST00000371429 IGLC3P0DOY3 106 aa11.19□□□□□ -0.62
NDC1-201ENST00000371429 HERV-K104P63124 156 aa11.19□□□□□ -0.62
NDC1-201ENST00000371429 ALPK3Q96L96 1907 aa11.19□□□□□ -0.62
NDC1-201ENST00000371429 USP9YO00507 2555 aaPredicted RBP11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms