RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 CTRLP40313 264 aa11.36□□□□□ -0.59
PFDN4-201ENST00000371419 TDRG1Q3Y452 100 aa11.36□□□□□ -0.59
PFDN4-201ENST00000371419 FER1L6-AS1Q8NA97 138 aa11.36□□□□□ -0.59
PFDN4-201ENST00000371419 C11orf72Q8NBR9 251 aa11.36□□□□□ -0.59
PFDN4-201ENST00000371419 NOP10Q9NPE3 64 aaKnown RBP11.36□□□□□ -0.59
PFDN4-201ENST00000371419 GSN-AS1Q9NRJ2 163 aa11.36□□□□□ -0.59
PFDN4-201ENST00000371419 TMSB15BA0A087X1C1 80 aa11.35□□□□□ -0.59
PFDN4-201ENST00000371419 F2Z2F3 143 aa11.35□□□□□ -0.59
PFDN4-201ENST00000371419 IGLC6P0CF74 106 aa11.35□□□□□ -0.59
PFDN4-201ENST00000371419 CASC10Q5T4H9 136 aa11.35□□□□□ -0.59
PFDN4-201ENST00000371419 LYZL1Q6UWQ5 148 aa11.35□□□□□ -0.59
PFDN4-201ENST00000371419 Q6ZTC4 211 aa11.35□□□□□ -0.59
PFDN4-201ENST00000371419 PHLDA1Q8WV24 401 aaPredicted RBP11.35□□□□□ -0.59
PFDN4-201ENST00000371419 KCNS1Q96KK3 526 aa11.35□□□□□ -0.59
PFDN4-201ENST00000371419 TRGV11A0A075B6L2 103 aa11.34□□□□□ -0.59
PFDN4-201ENST00000371419 DAD1P61803 113 aa11.34□□□□□ -0.59
PFDN4-201ENST00000371419 DAZ2Q13117 558 aaKnown RBP11.34□□□□□ -0.59
PFDN4-201ENST00000371419 ALKBH7Q9BT30 221 aaPredicted RBP11.34□□□□□ -0.59
PFDN4-201ENST00000371419 TPPP3Q9BW30 176 aa11.34□□□□□ -0.59
PFDN4-201ENST00000371419 SSBP4Q9BWG4 385 aaPredicted RBP11.34□□□□□ -0.59
PFDN4-201ENST00000371419 NUPR2A6NF83 97 aa11.33□□□□□ -0.6
PFDN4-201ENST00000371419 SERF1AO75920 110 aa11.33□□□□□ -0.6
PFDN4-201ENST00000371419 ZNF415Q09FC8 603 aa11.33□□□□□ -0.6
PFDN4-201ENST00000371419 DNLZQ5SXM8 178 aa11.33□□□□□ -0.6
PFDN4-201ENST00000371419 C11orf21Q9P2W6 132 aa11.33□□□□□ -0.6
PFDN4-201ENST00000371419 GNRH2O43555 120 aa11.32□□□□□ -0.6
PFDN4-201ENST00000371419 DEFB130BP0DP73 79 aa11.32□□□□□ -0.6
PFDN4-201ENST00000371419 DEFB130AP0DP74 79 aa11.32□□□□□ -0.6
PFDN4-201ENST00000371419 CEMP1Q6PRD7 247 aaPredicted RBP11.32□□□□□ -0.6
PFDN4-201ENST00000371419 C18orf32Q8TCD1 76 aa11.32□□□□□ -0.6
PFDN4-201ENST00000371419 CNFNQ9BYD5 112 aa11.32□□□□□ -0.6
PFDN4-201ENST00000371419 MDFICQ9P1T7 246 aa11.32□□□□□ -0.6
PFDN4-201ENST00000371419 TRAV10A0A0B4J240 114 aa11.32□□□□□ -0.6
PFDN4-201ENST00000371419 PYY3Q5JQD4 70 aa11.32□□□□□ -0.6
PFDN4-201ENST00000371419 TENM2Q9NT68 2774 aa11.31□□□□□ -0.6
PFDN4-201ENST00000371419 IGHV3-16A0A0C4DH30 117 aa11.31□□□□□ -0.6
PFDN4-201ENST00000371419 NUPR1O60356 82 aa11.31□□□□□ -0.6
PFDN4-201ENST00000371419 NIT2Q9NQR4 276 aa11.31□□□□□ -0.6
PFDN4-201ENST00000371419 KLK5Q9Y337 293 aaPredicted RBP11.31□□□□□ -0.6
PFDN4-201ENST00000371419 STARD9Q9P2P6 4700 aa11.31□□□□□ -0.6
PFDN4-201ENST00000371419 DEFB131BA0A096LNP1 70 aa11.3□□□□□ -0.6
PFDN4-201ENST00000371419 IGKV3D-20A0A0C4DH25 116 aa11.3□□□□□ -0.6
PFDN4-201ENST00000371419 LINC00310P59036 64 aa11.3□□□□□ -0.6
PFDN4-201ENST00000371419 JOSD1Q15040 202 aaPredicted RBP11.3□□□□□ -0.6
PFDN4-201ENST00000371419 LINC00612Q8N6U2 182 aa11.3□□□□□ -0.6
PFDN4-201ENST00000371419 SPXQ9BT56 116 aa11.3□□□□□ -0.6
PFDN4-201ENST00000371419 SAMD10Q9BYL1 202 aa11.3□□□□□ -0.6
PFDN4-201ENST00000371419 TRGV1A0A0A0MS02 117 aa11.29□□□□□ -0.6
PFDN4-201ENST00000371419 GAGE12BA1L429 117 aa11.29□□□□□ -0.6
PFDN4-201ENST00000371419 GAGE7O76087 117 aa11.29□□□□□ -0.6
PFDN4-201ENST00000371419 GAGE12FP0CL80 117 aa11.29□□□□□ -0.6
PFDN4-201ENST00000371419 GAGE12GP0CL81 117 aa11.29□□□□□ -0.6
PFDN4-201ENST00000371419 GAGE12IP0CL82 117 aa11.29□□□□□ -0.6
PFDN4-201ENST00000371419 TWIST1Q15672 202 aa11.29□□□□□ -0.6
PFDN4-201ENST00000371419 Q6ZTI0 123 aa11.29□□□□□ -0.6
PFDN4-201ENST00000371419 ZNF575Q86XF7 245 aa11.29□□□□□ -0.6
PFDN4-201ENST00000371419 CACNG7P62955 275 aa11.28□□□□□ -0.6
PFDN4-201ENST00000371419 LGALS9BQ3B8N2 356 aa11.28□□□□□ -0.6
PFDN4-201ENST00000371419 TMEM191AQ9H0A3 160 aa11.28□□□□□ -0.6
PFDN4-201ENST00000371419 DYNC2H1Q8NCM8 4307 aaKnown RBP11.28□□□□□ -0.6
PFDN4-201ENST00000371419 OR5AL1P0C617 328 aa11.27□□□□□ -0.6
PFDN4-201ENST00000371419 HTN3P15516 51 aa11.27□□□□□ -0.6
PFDN4-201ENST00000371419 NTF3P20783 257 aa11.27□□□□□ -0.6
PFDN4-201ENST00000371419 FAM104BQ5XKR9 115 aa11.27□□□□□ -0.6
PFDN4-201ENST00000371419 TRGV2A0A075B6R0 118 aa11.26□□□□□ -0.61
PFDN4-201ENST00000371419 SNAI2O43623 268 aa11.26□□□□□ -0.61
PFDN4-201ENST00000371419 HSBP1O75506 76 aa11.26□□□□□ -0.61
PFDN4-201ENST00000371419 ATP5G1P05496 136 aa11.26□□□□□ -0.61
PFDN4-201ENST00000371419 MED14OSP0DP75 135 aa11.26□□□□□ -0.61
PFDN4-201ENST00000371419 S100A12P80511 92 aa11.26□□□□□ -0.61
PFDN4-201ENST00000371419 IQCJQ1A5X6 159 aa11.26□□□□□ -0.61
PFDN4-201ENST00000371419 CHCHD1Q96BP2 118 aaKnown RBP11.26□□□□□ -0.61
PFDN4-201ENST00000371419 MRPL16Q9NX20 251 aaKnown RBP11.26□□□□□ -0.61
PFDN4-201ENST00000371419 IGHV4-4A0A075B6R2 117 aa11.25□□□□□ -0.61
PFDN4-201ENST00000371419 M0R2P5 195 aa11.25□□□□□ -0.61
PFDN4-201ENST00000371419 S100A4P26447 101 aaKnown RBP11.25□□□□□ -0.61
PFDN4-201ENST00000371419 ASIPP42127 132 aa11.25□□□□□ -0.61
PFDN4-201ENST00000371419 AMTP48728 403 aa11.25□□□□□ -0.61
PFDN4-201ENST00000371419 SMIM15Q7Z3B0 74 aa11.25□□□□□ -0.61
PFDN4-201ENST00000371419 C18orf15Q96N68 181 aa11.25□□□□□ -0.61
PFDN4-201ENST00000371419 IGLL5B9A064 214 aa11.25□□□□□ -0.61
PFDN4-201ENST00000371419 RNASE3P12724 160 aaKnown RBP11.25□□□□□ -0.61
PFDN4-201ENST00000371419 NIT1Q86X76 327 aa11.25□□□□□ -0.61
PFDN4-201ENST00000371419 RASL10AQ92737 203 aa11.25□□□□□ -0.61
PFDN4-201ENST00000371419 C9orf85Q96MD7 179 aa11.25□□□□□ -0.61
PFDN4-201ENST00000371419 PPBPP02775 128 aa11.24□□□□□ -0.61
PFDN4-201ENST00000371419 PMCHP20382 165 aa11.24□□□□□ -0.61
PFDN4-201ENST00000371419 RNASEKQ6P5S7 137 aaKnown RBP11.24□□□□□ -0.61
PFDN4-201ENST00000371419 ORMDL3Q8N138 153 aa11.24□□□□□ -0.61
PFDN4-201ENST00000371419 F5H768 121 aa11.23□□□□□ -0.61
PFDN4-201ENST00000371419 LINC00614P0C842 121 aa11.23□□□□□ -0.61
PFDN4-201ENST00000371419 RAB4AP20338 218 aa11.23□□□□□ -0.61
PFDN4-201ENST00000371419 TCTAP57738 103 aa11.23□□□□□ -0.61
PFDN4-201ENST00000371419 SSTP61278 116 aa11.23□□□□□ -0.61
PFDN4-201ENST00000371419 AMN1Q8IY45 258 aa11.23□□□□□ -0.61
PFDN4-201ENST00000371419 MUC21A0A0G2JKD1 596 aa11.22□□□□□ -0.61
PFDN4-201ENST00000371419 MUC21A0A140T8X8 626 aa11.22□□□□□ -0.61
PFDN4-201ENST00000371419 ZNF876PQ49A33 203 aa11.22□□□□□ -0.61
PFDN4-201ENST00000371419 MRPL51Q4U2R6 128 aaKnown RBP11.22□□□□□ -0.61
PFDN4-201ENST00000371419 SPANXN1Q5VSR9 72 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms