RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 NEXN-AS1Q8NBZ9 246 aa21.47■■□□□ 1.03
SSBP3-204ENST00000371320 CHTOPQ9Y3Y2 248 aaKnown RBP21.47■■□□□ 1.03
SSBP3-204ENST00000371320 HLA-DRB4X5D2U9 266 aa21.47■■□□□ 1.03
SSBP3-204ENST00000371320 H3BRM9 83 aa21.44■■□□□ 1.02
SSBP3-204ENST00000371320 TRAV8-6A0A0B4J262 113 aa21.44■■□□□ 1.02
SSBP3-204ENST00000371320 POLR2KP53803 58 aaKnown RBP21.44■■□□□ 1.02
SSBP3-204ENST00000371320 FAM74A4Q5TZK3 123 aa21.44■■□□□ 1.02
SSBP3-204ENST00000371320 AMTNQ6UX39 209 aa21.44■■□□□ 1.02
SSBP3-204ENST00000371320 KRTAP1-3Q8IUG1 177 aa21.44■■□□□ 1.02
SSBP3-204ENST00000371320 BAALCQ8WXS3 180 aa21.44■■□□□ 1.02
SSBP3-204ENST00000371320 TEX15Q9BXT5 2789 aa21.44■■□□□ 1.02
SSBP3-204ENST00000371320 TRBV25-1A0A075B6N4 114 aa21.43■■□□□ 1.02
SSBP3-204ENST00000371320 LINC01619G3V211 115 aa21.43■■□□□ 1.02
SSBP3-204ENST00000371320 CHAC1Q9BUX1 264 aa21.43■■□□□ 1.02
SSBP3-204ENST00000371320 VCYO14598 125 aa21.42■■□□□ 1.02
SSBP3-204ENST00000371320 CYSLTR1Q9Y271 337 aa21.41■■□□□ 1.02
SSBP3-204ENST00000371320 OR11H1Q8NG94 326 aa21.41■■□□□ 1.02
SSBP3-204ENST00000371320 AGRNO00468 2067 aa21.41■■□□□ 1.02
SSBP3-204ENST00000371320 KIR2DL4Q99706 377 aa21.4■■□□□ 1.02
SSBP3-204ENST00000371320 KNCNA6PVL3 124 aa21.4■■□□□ 1.02
SSBP3-204ENST00000371320 ZFP2Q6ZN57 461 aa21.4■■□□□ 1.02
SSBP3-204ENST00000371320 SDHAF1A6NFY7 115 aa21.39■■□□□ 1.01
SSBP3-204ENST00000371320 C9orf118A6NHY6 69 aa21.39■■□□□ 1.01
SSBP3-204ENST00000371320 PRSS29PA6NIE9 313 aa21.39■■□□□ 1.01
SSBP3-204ENST00000371320 KHDC1LQ5JSQ8 128 aa21.39■■□□□ 1.01
SSBP3-204ENST00000371320 MAPKAPK5-AS1Q8N8E1 139 aa21.39■■□□□ 1.01
SSBP3-204ENST00000371320 C4orf3Q8WVX3 66 aa21.39■■□□□ 1.01
SSBP3-204ENST00000371320 PEMTQ9UBM1 199 aa21.39■■□□□ 1.01
SSBP3-204ENST00000371320 GCSHP23434 173 aa21.38■■□□□ 1.01
SSBP3-204ENST00000371320 DEFB131AP59861 70 aa21.38■■□□□ 1.01
SSBP3-204ENST00000371320 ZNF56Q15929 161 aa21.38■■□□□ 1.01
SSBP3-204ENST00000371320 CRYGDP07320 174 aa21.38■■□□□ 1.01
SSBP3-204ENST00000371320 DUX3Q96PT4 197 aa21.38■■□□□ 1.01
SSBP3-204ENST00000371320 TP53TG1Q9Y2A0 90 aa21.38■■□□□ 1.01
SSBP3-204ENST00000371320 TRGV11A0A075B6L2 103 aa21.37■■□□□ 1.01
SSBP3-204ENST00000371320 TRBV6-5A0A0K0K1A5 114 aa21.37■■□□□ 1.01
SSBP3-204ENST00000371320 LINC01549A6NIU2 74 aa21.37■■□□□ 1.01
SSBP3-204ENST00000371320 DEFB104AQ8WTQ1 72 aa21.37■■□□□ 1.01
SSBP3-204ENST00000371320 SORL1Q92673 2214 aa21.36■■□□□ 1.01
SSBP3-204ENST00000371320 ZNF876PQ49A33 203 aa21.36■■□□□ 1.01
SSBP3-204ENST00000371320 KMT2BQ9UMN6 2715 aaPredicted RBP21.35■■□□□ 1.01
SSBP3-204ENST00000371320 TRBV27A0A0K0K1C4 114 aa21.35■■□□□ 1.01
SSBP3-204ENST00000371320 FOSL1P15407 271 aa21.35■■□□□ 1.01
SSBP3-204ENST00000371320 M0QY20 66 aa21.35■■□□□ 1.01
SSBP3-204ENST00000371320 RAB37Q96AX2 223 aa21.35■■□□□ 1.01
SSBP3-204ENST00000371320 CHD6Q8TD26 2715 aa21.34■■□□□ 1.01
SSBP3-204ENST00000371320 H3BUT2 72 aa21.33■■□□□ 1.01
SSBP3-204ENST00000371320 FXYD2P54710 66 aa21.33■■□□□ 1.01
SSBP3-204ENST00000371320 TMEM86BQ8N661 226 aa21.33■■□□□ 1.01
SSBP3-204ENST00000371320 TRAV2A0A0B4J234 112 aa21.33■■□□□ 1
SSBP3-204ENST00000371320 OR11H12B2RN74 326 aa21.33■■□□□ 1
SSBP3-204ENST00000371320 RBMY1A1P0DJD3 496 aaKnown RBP21.33■■□□□ 1
SSBP3-204ENST00000371320 RBMY1CP0DJD4 496 aa21.33■■□□□ 1
SSBP3-204ENST00000371320 RBMY1FQ15415 496 aaKnown RBP21.33■■□□□ 1
SSBP3-204ENST00000371320 TMEM61Q8N0U2 210 aa21.33■■□□□ 1
SSBP3-204ENST00000371320 OR11H2Q8NH07 326 aa21.33■■□□□ 1
SSBP3-204ENST00000371320 APCP25054 2843 aa21.32■■□□□ 1
SSBP3-204ENST00000371320 IGIPA6NJ69 53 aa21.32■■□□□ 1
SSBP3-204ENST00000371320 H3BMM0 161 aa21.32■■□□□ 1
SSBP3-204ENST00000371320 K7EP13 123 aa21.32■■□□□ 1
SSBP3-204ENST00000371320 KLHL30-AS1Q8NEE0 82 aa21.32■■□□□ 1
SSBP3-204ENST00000371320 DLX4Q92988 240 aaPredicted RBP21.32■■□□□ 1
SSBP3-204ENST00000371320 TSHBP01222 138 aa21.32■■□□□ 1
SSBP3-204ENST00000371320 RPL39P62891 51 aaKnown RBP21.32■■□□□ 1
SSBP3-204ENST00000371320 MORN3Q6PF18 240 aaPredicted RBP21.32■■□□□ 1
SSBP3-204ENST00000371320 ZNF256Q9Y2P7 627 aaPredicted RBP21.32■■□□□ 1
SSBP3-204ENST00000371320 SMIM13P0DJ93 91 aa21.31■■□□□ 1
SSBP3-204ENST00000371320 TRPT1Q86TN4 253 aaKnown RBP21.31■■□□□ 1
SSBP3-204ENST00000371320 GAGE10A6NGK3 116 aa21.3■■□□□ 1
SSBP3-204ENST00000371320 HTN1P15515 57 aa21.3■■□□□ 1
SSBP3-204ENST00000371320 RIPPLY3P57055 190 aa21.3■■□□□ 1
SSBP3-204ENST00000371320 CEND1Q8N111 149 aa21.3■■□□□ 1
SSBP3-204ENST00000371320 WFDC11Q8NEX6 87 aa21.3■■□□□ 1
SSBP3-204ENST00000371320 DYNLRB2Q8TF09 96 aa21.3■■□□□ 1
SSBP3-204ENST00000371320 TMEM141Q96I45 108 aa21.3■■□□□ 1
SSBP3-204ENST00000371320 JMJD8Q96S16 334 aa21.3■■□□□ 1
SSBP3-204ENST00000371320 NAA38Q9BRA0 125 aaKnown RBP21.3■■□□□ 1
SSBP3-204ENST00000371320 A8MTW9 85 aa21.3■■□□□ 1
SSBP3-204ENST00000371320 MYO9AB2RTY4 2548 aa21.29■■□□□ 1
SSBP3-204ENST00000371320 TM2D2Q9BX73 214 aa21.29■■□□□ 1
SSBP3-204ENST00000371320 TEX29Q8N6K0 151 aa21.28■■□□□ 1
SSBP3-204ENST00000371320 MYMXA0A1B0GTQ4 84 aa21.28■■□□□ 1
SSBP3-204ENST00000371320 Q6ZSV7 163 aa21.28■■□□□ 1
SSBP3-204ENST00000371320 TIMM17AQ99595 171 aa21.28■■□□□ 1
SSBP3-204ENST00000371320 RBMY1BA6NDE4 496 aaKnown RBP21.27■■□□□ 1
SSBP3-204ENST00000371320 RBMY1EA6NEQ0 496 aaKnown RBP21.27■■□□□ 1
SSBP3-204ENST00000371320 E9PLD3 99 aa21.27■■□□□ 1
SSBP3-204ENST00000371320 RBMY1DP0C7P1 496 aaKnown RBP21.27■■□□□ 1
SSBP3-204ENST00000371320 PMVKQ15126 192 aa21.27■■□□□ 1
SSBP3-204ENST00000371320 HIST2H2BDQ6DRA6 164 aa21.27■■□□□ 1
SSBP3-204ENST00000371320 TAL2Q16559 108 aa21.27■□□□□ 0.99
SSBP3-204ENST00000371320 GTF2H5Q6ZYL4 71 aa21.26■□□□□ 0.99
SSBP3-204ENST00000371320 PRADC1Q9BSG0 188 aa21.25■□□□□ 0.99
SSBP3-204ENST00000371320 CST9LQ9H4G1 147 aa21.25■□□□□ 0.99
SSBP3-204ENST00000371320 RNASE8Q8TDE3 154 aaKnown RBP21.25■□□□□ 0.99
SSBP3-204ENST00000371320 TENM4Q6N022 2769 aa21.25■□□□□ 0.99
SSBP3-204ENST00000371320 DEFB114Q30KQ6 69 aa21.24■□□□□ 0.99
SSBP3-204ENST00000371320 PAPPA-AS1Q5QFB9 102 aa21.24■□□□□ 0.99
SSBP3-204ENST00000371320 MAP6D1Q9H9H5 199 aa21.24■□□□□ 0.99
SSBP3-204ENST00000371320 TLN2Q9Y4G6 2542 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms