RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 SRD5A1P18405 259 aa10.91□□□□□ -0.66
PHTF1-204ENST00000369604 VMO1Q7Z5L0 202 aa10.91□□□□□ -0.66
PHTF1-204ENST00000369604 G3V318 75 aa10.9□□□□□ -0.66
PHTF1-204ENST00000369604 PPP1R17O96001 155 aa10.9□□□□□ -0.66
PHTF1-204ENST00000369604 TSHBP01222 138 aa10.9□□□□□ -0.66
PHTF1-204ENST00000369604 HERV-K104P63124 156 aa10.9□□□□□ -0.67
PHTF1-204ENST00000369604 IGFL3Q6UXB1 125 aa10.9□□□□□ -0.67
PHTF1-204ENST00000369604 TRBV7-9A0A0J9YWB2 115 aa10.89□□□□□ -0.67
PHTF1-204ENST00000369604 TEX49A0A1B0GTD5 131 aa10.89□□□□□ -0.67
PHTF1-204ENST00000369604 C15orf53Q8NAA6 179 aa10.89□□□□□ -0.67
PHTF1-204ENST00000369604 ATP6V0E1O15342 81 aa10.89□□□□□ -0.67
PHTF1-204ENST00000369604 IGHV3-33P01772 117 aa10.89□□□□□ -0.67
PHTF1-204ENST00000369604 LINC01560Q8TB33 94 aa10.89□□□□□ -0.67
PHTF1-204ENST00000369604 ATXN8Q156A1 80 aa10.89□□□□□ -0.67
PHTF1-204ENST00000369604 MRPL53Q96EL3 112 aaKnown RBP10.89□□□□□ -0.67
PHTF1-204ENST00000369604 ZNF256Q9Y2P7 627 aaPredicted RBP10.89□□□□□ -0.67
PHTF1-204ENST00000369604 CACNA1AO00555 2505 aa10.88□□□□□ -0.67
PHTF1-204ENST00000369604 ZFYVE26Q68DK2 2539 aa10.88□□□□□ -0.67
PHTF1-204ENST00000369604 A0A087WWL8 130 aa10.88□□□□□ -0.67
PHTF1-204ENST00000369604 FAM159AQ6UWV7 190 aa10.88□□□□□ -0.67
PHTF1-204ENST00000369604 MUSTN1Q8IVN3 82 aa10.88□□□□□ -0.67
PHTF1-204ENST00000369604 LY6G5BQ8NDX9 201 aa10.88□□□□□ -0.67
PHTF1-204ENST00000369604 ZNRF2Q8NHG8 242 aa10.88□□□□□ -0.67
PHTF1-204ENST00000369604 FAM110DQ8TAY7 271 aaPredicted RBP10.88□□□□□ -0.67
PHTF1-204ENST00000369604 EEF1AKMT3Q96AZ1 226 aa10.88□□□□□ -0.67
PHTF1-204ENST00000369604 C20orf173Q96LM9 149 aa10.88□□□□□ -0.67
PHTF1-204ENST00000369604 RNF223E7ERA6 249 aa10.88□□□□□ -0.67
PHTF1-204ENST00000369604 PRSS2P07478 247 aa10.88□□□□□ -0.67
PHTF1-204ENST00000369604 CCDC140Q96MF4 163 aa10.88□□□□□ -0.67
PHTF1-204ENST00000369604 LINC01620Q4KN68 170 aa10.87□□□□□ -0.67
PHTF1-204ENST00000369604 GPHB5Q86YW7 130 aa10.87□□□□□ -0.67
PHTF1-204ENST00000369604 IGHV1-69DA0A0B4J2H0 117 aa10.87□□□□□ -0.67
PHTF1-204ENST00000369604 SHISA2Q6UWI4 295 aa10.87□□□□□ -0.67
PHTF1-204ENST00000369604 Q8N9W7 124 aa10.87□□□□□ -0.67
PHTF1-204ENST00000369604 JPT2Q9H910 190 aa10.87□□□□□ -0.67
PHTF1-204ENST00000369604 IGIPA6NJ69 53 aa10.87□□□□□ -0.67
PHTF1-204ENST00000369604 F6UB75 175 aa10.87□□□□□ -0.67
PHTF1-204ENST00000369604 FAM74A4Q5TZK3 123 aa10.87□□□□□ -0.67
PHTF1-204ENST00000369604 ZFAND2AQ8N6M9 145 aa10.87□□□□□ -0.67
PHTF1-204ENST00000369604 LINC00477Q96M19 166 aa10.87□□□□□ -0.67
PHTF1-204ENST00000369604 OPRPNQ99935 248 aaPredicted RBP10.87□□□□□ -0.67
PHTF1-204ENST00000369604 VCYO14598 125 aa10.86□□□□□ -0.67
PHTF1-204ENST00000369604 ODF3BA8MYP8 253 aa10.86□□□□□ -0.67
PHTF1-204ENST00000369604 ELANEP08246 267 aa10.86□□□□□ -0.67
PHTF1-204ENST00000369604 TMEM141Q96I45 108 aa10.86□□□□□ -0.67
PHTF1-204ENST00000369604 CFAP161Q6P656 301 aa10.85□□□□□ -0.67
PHTF1-204ENST00000369604 C9orf139Q6ZV77 190 aa10.85□□□□□ -0.67
PHTF1-204ENST00000369604 SDHAF1A6NFY7 115 aa10.85□□□□□ -0.67
PHTF1-204ENST00000369604 PRR30Q53SZ7 412 aaPredicted RBP10.85□□□□□ -0.67
PHTF1-204ENST00000369604 C2orf82Q6UX34 121 aa10.85□□□□□ -0.67
PHTF1-204ENST00000369604 TMEM263Q8WUH6 116 aaKnown RBP10.85□□□□□ -0.67
PHTF1-204ENST00000369604 LINC00527Q9UJ94 153 aa10.85□□□□□ -0.67
PHTF1-204ENST00000369604 CENPVL3A0A0U1RRI6 287 aa10.85□□□□□ -0.67
PHTF1-204ENST00000369604 H3BMM0 161 aa10.85□□□□□ -0.67
PHTF1-204ENST00000369604 M0R1W7 72 aa10.85□□□□□ -0.67
PHTF1-204ENST00000369604 RPL32P62910 135 aaKnown RBP10.85□□□□□ -0.67
PHTF1-204ENST00000369604 UBE2WQ96B02 151 aa10.85□□□□□ -0.67
PHTF1-204ENST00000369604 CRYBG3Q68DQ2 2970 aa10.84□□□□□ -0.67
PHTF1-204ENST00000369604 ADARB2-AS1A8MUL3 147 aa10.84□□□□□ -0.67
PHTF1-204ENST00000369604 FOXC1Q12948 553 aa10.84□□□□□ -0.67
PHTF1-204ENST00000369604 SUMO4Q6EEV6 95 aa10.84□□□□□ -0.67
PHTF1-204ENST00000369604 Q8N6K4 173 aa10.84□□□□□ -0.67
PHTF1-204ENST00000369604 LENEPQ9Y5L5 61 aa10.84□□□□□ -0.67
PHTF1-204ENST00000369604 MEIG1Q5JSS6 88 aa10.83□□□□□ -0.67
PHTF1-204ENST00000369604 C3orf56Q8N813 242 aa10.83□□□□□ -0.67
PHTF1-204ENST00000369604 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.83□□□□□ -0.68
PHTF1-204ENST00000369604 ZNF876PQ49A33 203 aa10.83□□□□□ -0.68
PHTF1-204ENST00000369604 EIF4EBP3O60516 100 aaPredicted RBP10.83□□□□□ -0.68
PHTF1-204ENST00000369604 RNASE3P12724 160 aaKnown RBP10.83□□□□□ -0.68
PHTF1-204ENST00000369604 ZNF56Q15929 161 aa10.83□□□□□ -0.68
PHTF1-204ENST00000369604 TIMM17AQ99595 171 aa10.83□□□□□ -0.68
PHTF1-204ENST00000369604 OVOL1O14753 267 aa10.82□□□□□ -0.68
PHTF1-204ENST00000369604 ODF3Q96PU9 254 aa10.82□□□□□ -0.68
PHTF1-204ENST00000369604 P0DMU3 169 aa10.82□□□□□ -0.68
PHTF1-204ENST00000369604 FAM231AP0DMU4 169 aa10.82□□□□□ -0.68
PHTF1-204ENST00000369604 FAM231CP0DMU5 169 aa10.82□□□□□ -0.68
PHTF1-204ENST00000369604 AMELXQ99217 191 aa10.82□□□□□ -0.68
PHTF1-204ENST00000369604 TRBV7-1A0A0A6YYK4 115 aa10.82□□□□□ -0.68
PHTF1-204ENST00000369604 A0A0B4J2C4 111 aa10.82□□□□□ -0.68
PHTF1-204ENST00000369604 TRBV10-2A0A0K0K1G8 114 aa10.82□□□□□ -0.68
PHTF1-204ENST00000369604 LEPROTO15243 131 aa10.82□□□□□ -0.68
PHTF1-204ENST00000369604 POLR2KP53803 58 aaKnown RBP10.81□□□□□ -0.68
PHTF1-204ENST00000369604 NPC2P61916 151 aa10.81□□□□□ -0.68
PHTF1-204ENST00000369604 TRIAP1O43715 76 aa10.81□□□□□ -0.68
PHTF1-204ENST00000369604 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.81□□□□□ -0.683e-6■■■■■ 32
PHTF1-204ENST00000369604 ITLN2Q8WWU7 325 aaPredicted RBP10.8□□□□□ -0.68
PHTF1-204ENST00000369604 OOSP1A8MZH6 123 aa10.8□□□□□ -0.68
PHTF1-204ENST00000369604 M0R2P5 195 aa10.8□□□□□ -0.68
PHTF1-204ENST00000369604 MINOS1Q5TGZ0 78 aa10.8□□□□□ -0.68
PHTF1-204ENST00000369604 DUX3Q96PT4 197 aa10.8□□□□□ -0.68
PHTF1-204ENST00000369604 SPXQ9BT56 116 aa10.8□□□□□ -0.68
PHTF1-204ENST00000369604 ZNF580Q9UK33 172 aa10.8□□□□□ -0.68
PHTF1-204ENST00000369604 MINOS1-NBL1R4GNA1 71 aa10.8□□□□□ -0.68
PHTF1-204ENST00000369604 MUC4Q99102 2169 aa10.79□□□□□ -0.68
PHTF1-204ENST00000369604 A0A0J9YXV3 536 aa10.79□□□□□ -0.68
PHTF1-204ENST00000369604 M0QXV9 152 aa10.79□□□□□ -0.68
PHTF1-204ENST00000369604 COX6CP09669 75 aa10.79□□□□□ -0.68
PHTF1-204ENST00000369604 EBI3Q14213 229 aa10.79□□□□□ -0.68
PHTF1-204ENST00000369604 FAM110AQ9BQ89 295 aa10.79□□□□□ -0.68
PHTF1-204ENST00000369604 TMEM223A0PJW6 202 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms