RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 ZNF256Q9Y2P7 627 aaPredicted RBP6.43□□□□□ -1.38
TPM3-213ENST00000368545 HLA-DRB4X5D2U9 266 aa6.43□□□□□ -1.38
TPM3-213ENST00000368545 IGKV3D-20A0A0C4DH25 116 aa6.42□□□□□ -1.38
TPM3-213ENST00000368545 A8MTW9 85 aa6.42□□□□□ -1.38
TPM3-213ENST00000368545 APCSP02743 223 aa6.42□□□□□ -1.38
TPM3-213ENST00000368545 ARMS2P0C7Q2 107 aa6.42□□□□□ -1.38
TPM3-213ENST00000368545 CDKN1BP46527 198 aa6.42□□□□□ -1.38
TPM3-213ENST00000368545 NDUFA6P56556 154 aa6.42□□□□□ -1.38
TPM3-213ENST00000368545 RPL24P83731 157 aaKnown RBP6.42□□□□□ -1.38
TPM3-213ENST00000368545 LYZL1Q6UWQ5 148 aa6.42□□□□□ -1.38
TPM3-213ENST00000368545 GATD1Q8NB37 220 aa6.42□□□□□ -1.38
TPM3-213ENST00000368545 CNFNQ9BYD5 112 aa6.42□□□□□ -1.38
TPM3-213ENST00000368545 IGLV1-51P01701 117 aa6.41□□□□□ -1.38
TPM3-213ENST00000368545 FRMD6-AS1P0C7T7 363 aa6.41□□□□□ -1.38
TPM3-213ENST00000368545 RNASE4P34096 147 aaKnown RBP6.41□□□□□ -1.38
TPM3-213ENST00000368545 C7orf71A4D174 169 aa6.41□□□□□ -1.38
TPM3-213ENST00000368545 OR5AL1P0C617 328 aa6.41□□□□□ -1.38
TPM3-213ENST00000368545 COA6Q5JTJ3 125 aaKnown RBP6.41□□□□□ -1.38
TPM3-213ENST00000368545 KCNS1Q96KK3 526 aa6.41□□□□□ -1.38
TPM3-213ENST00000368545 RYR3Q15413 4870 aa6.4□□□□□ -1.38
TPM3-213ENST00000368545 NBEAL2Q6ZNJ1 2754 aa6.4□□□□□ -1.38
TPM3-213ENST00000368545 TRRAPQ9Y4A5 3859 aa6.4□□□□□ -1.38
TPM3-213ENST00000368545 RBMY1BA6NDE4 496 aaKnown RBP6.4□□□□□ -1.38
TPM3-213ENST00000368545 RBMY1EA6NEQ0 496 aaKnown RBP6.4□□□□□ -1.38
TPM3-213ENST00000368545 H3BMM0 161 aa6.4□□□□□ -1.38
TPM3-213ENST00000368545 K7EIL1 84 aa6.4□□□□□ -1.38
TPM3-213ENST00000368545 RBMY1DP0C7P1 496 aaKnown RBP6.4□□□□□ -1.38
TPM3-213ENST00000368545 INSL3P51460 131 aa6.4□□□□□ -1.38
TPM3-213ENST00000368545 SLAQ13239 276 aa6.4□□□□□ -1.38
TPM3-213ENST00000368545 DNLZQ5SXM8 178 aa6.4□□□□□ -1.38
TPM3-213ENST00000368545 ZNF493Q6ZR52 646 aa6.4□□□□□ -1.38
TPM3-213ENST00000368545 WFDC9Q8NEX5 89 aa6.4□□□□□ -1.38
TPM3-213ENST00000368545 NAGKQ9UJ70 344 aa6.4□□□□□ -1.38
TPM3-213ENST00000368545 GRIFINA4D1Z8 144 aa6.4□□□□□ -1.39
TPM3-213ENST00000368545 OR11H12B2RN74 326 aa6.4□□□□□ -1.39
TPM3-213ENST00000368545 SNAI2O43623 268 aa6.4□□□□□ -1.39
TPM3-213ENST00000368545 ASIPP42127 132 aa6.4□□□□□ -1.39
TPM3-213ENST00000368545 CACNG7P62955 275 aa6.4□□□□□ -1.39
TPM3-213ENST00000368545 OR10J3Q5JRS4 329 aa6.4□□□□□ -1.39
TPM3-213ENST00000368545 AMTNQ6UX39 209 aa6.4□□□□□ -1.39
TPM3-213ENST00000368545 ZNF575Q86XF7 245 aa6.4□□□□□ -1.39
TPM3-213ENST00000368545 C12orf57Q99622 126 aa6.4□□□□□ -1.39
TPM3-213ENST00000368545 AGRNO00468 2067 aa6.39□□□□□ -1.39
TPM3-213ENST00000368545 TENM1Q9UKZ4 2725 aa6.39□□□□□ -1.39
TPM3-213ENST00000368545 KNCNA6PVL3 124 aa6.39□□□□□ -1.39
TPM3-213ENST00000368545 Q0VG73 95 aa6.39□□□□□ -1.39
TPM3-213ENST00000368545 SPINK13Q1W4C9 94 aa6.39□□□□□ -1.39
TPM3-213ENST00000368545 TDRG1Q3Y452 100 aa6.39□□□□□ -1.39
TPM3-213ENST00000368545 DEFB121Q5J5C9 76 aa6.39□□□□□ -1.39
TPM3-213ENST00000368545 GFI1BQ5VTD9 330 aa6.39□□□□□ -1.39
TPM3-213ENST00000368545 H0Y8G0 127 aa6.38□□□□□ -1.39
TPM3-213ENST00000368545 M0R2Z0 102 aa6.38□□□□□ -1.39
TPM3-213ENST00000368545 ZNF324O75467 553 aaPredicted RBP6.38□□□□□ -1.39
TPM3-213ENST00000368545 IGKV3-20P01619 116 aa6.38□□□□□ -1.39
TPM3-213ENST00000368545 AMBPP02760 352 aa6.38□□□□□ -1.39
TPM3-213ENST00000368545 S100A4P26447 101 aaKnown RBP6.38□□□□□ -1.39
TPM3-213ENST00000368545 SRIP30626 198 aa6.38□□□□□ -1.39
TPM3-213ENST00000368545 TWIST1Q15672 202 aa6.38□□□□□ -1.39
TPM3-213ENST00000368545 MCRIP2Q9BUT9 160 aaKnown RBP6.38□□□□□ -1.39
TPM3-213ENST00000368545 IGHV4-4A0A075B6R2 117 aa6.38□□□□□ -1.39
TPM3-213ENST00000368545 LOC102724200A0A096LPH7 203 aaPredicted RBP6.38□□□□□ -1.39
TPM3-213ENST00000368545 TRAV12-3A0A0B4J271 114 aa6.38□□□□□ -1.39
TPM3-213ENST00000368545 NTF3P20783 257 aa6.38□□□□□ -1.39
TPM3-213ENST00000368545 S100A2P29034 98 aa6.38□□□□□ -1.39
TPM3-213ENST00000368545 KIAA1644Q3SXP7 199 aa6.38□□□□□ -1.39
TPM3-213ENST00000368545 C9orf66Q5T8R8 295 aa6.38□□□□□ -1.39
TPM3-213ENST00000368545 Q6ZQT7 251 aa6.38□□□□□ -1.39
TPM3-213ENST00000368545 NDUFAF3Q9BU61 184 aa6.38□□□□□ -1.39
TPM3-213ENST00000368545 TMEM191AQ9H0A3 160 aa6.38□□□□□ -1.39
TPM3-213ENST00000368545 KMT2CQ8NEZ4 4911 aaKnown RBP6.38□□□□□ -1.39
TPM3-213ENST00000368545 PRKDCP78527 4128 aaKnown RBP6.38□□□□□ -1.39
TPM3-213ENST00000368545 SORL1Q92673 2214 aa6.37□□□□□ -1.39
TPM3-213ENST00000368545 IGLV5-37A0A075B6J1 123 aa6.37□□□□□ -1.39
TPM3-213ENST00000368545 TRAV12-2A0A075B6T6 113 aa6.37□□□□□ -1.39
TPM3-213ENST00000368545 H3BVH4 76 aa6.37□□□□□ -1.39
TPM3-213ENST00000368545 EGFEM1PQ0D2K5 195 aa6.37□□□□□ -1.39
TPM3-213ENST00000368545 MUC21Q5SSG8 566 aa6.37□□□□□ -1.39
TPM3-213ENST00000368545 SPANXN1Q5VSR9 72 aa6.37□□□□□ -1.39
TPM3-213ENST00000368545 SMIM15Q7Z3B0 74 aa6.37□□□□□ -1.39
TPM3-213ENST00000368545 HIST3H2BBQ8N257 126 aa6.37□□□□□ -1.39
TPM3-213ENST00000368545 C20orf144Q9BQM9 153 aa6.37□□□□□ -1.39
TPM3-213ENST00000368545 IGHV1OR15-1A0A075B7D0 117 aa6.37□□□□□ -1.39
TPM3-213ENST00000368545 NUTF2P61970 127 aaKnown RBP6.37□□□□□ -1.39
TPM3-213ENST00000368545 FAM104BQ5XKR9 115 aa6.37□□□□□ -1.39
TPM3-213ENST00000368545 VWFP04275 2813 aa6.36□□□□□ -1.39
TPM3-213ENST00000368545 TRPT1Q86TN4 253 aaKnown RBP6.36□□□□□ -1.39
TPM3-213ENST00000368545 BAGE3Q86Y29 109 aa6.36□□□□□ -1.39
TPM3-213ENST00000368545 OR10AG1Q8NH19 301 aa6.36□□□□□ -1.39
TPM3-213ENST00000368545 SCRT2Q9NQ03 307 aa6.36□□□□□ -1.39
TPM3-213ENST00000368545 PHLDA3Q9Y5J5 127 aa6.36□□□□□ -1.39
TPM3-213ENST00000368545 CRXO43186 299 aaPredicted RBP6.35□□□□□ -1.39
TPM3-213ENST00000368545 INSP01308 110 aa6.35□□□□□ -1.39
TPM3-213ENST00000368545 PRB2P02812 416 aaPredicted RBP6.35□□□□□ -1.39
TPM3-213ENST00000368545 CD7P09564 240 aa6.35□□□□□ -1.39
TPM3-213ENST00000368545 ESDP10768 282 aa6.35□□□□□ -1.39
TPM3-213ENST00000368545 RNASE3P12724 160 aaKnown RBP6.35□□□□□ -1.39
TPM3-213ENST00000368545 AKR1D1P51857 326 aa6.35□□□□□ -1.39
TPM3-213ENST00000368545 C18orf32Q8TCD1 76 aa6.35□□□□□ -1.39
TPM3-213ENST00000368545 MUC21A0A0G2JKD1 596 aa6.35□□□□□ -1.39
TPM3-213ENST00000368545 MUC21A0A140T8X8 626 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms