RNA–Protein interactions for RNA: ENST00000368440.4

SMPDL3A-201, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPDL3A, Length 1,851 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-201ENST00000368440 ZNF479Q96JC4 524 aa10.54□□□□□ -0.72
SMPDL3A-201ENST00000368440 NAT8BQ9UHF3 227 aa10.54□□□□□ -0.72
SMPDL3A-201ENST00000368440 ASIPP42127 132 aa10.53□□□□□ -0.72
SMPDL3A-201ENST00000368440 H3BVH4 76 aa10.53□□□□□ -0.72
SMPDL3A-201ENST00000368440 NUDT3O95989 172 aa10.53□□□□□ -0.72
SMPDL3A-201ENST00000368440 RAB4BP61018 213 aa10.53□□□□□ -0.72
SMPDL3A-201ENST00000368440 CT83Q5H943 113 aa10.53□□□□□ -0.72
SMPDL3A-201ENST00000368440 C15orf53Q8NAA6 179 aa10.53□□□□□ -0.72
SMPDL3A-201ENST00000368440 MUC21A0A0G2JKD1 596 aa10.52□□□□□ -0.73
SMPDL3A-201ENST00000368440 MUC21A0A140T8X8 626 aa10.52□□□□□ -0.73
SMPDL3A-201ENST00000368440 S100A4P26447 101 aaKnown RBP10.52□□□□□ -0.73
SMPDL3A-201ENST00000368440 FHL2Q14192 279 aa10.52□□□□□ -0.73
SMPDL3A-201ENST00000368440 ZNF876PQ49A33 203 aa10.52□□□□□ -0.73
SMPDL3A-201ENST00000368440 FRZBQ92765 325 aa10.52□□□□□ -0.73
SMPDL3A-201ENST00000368440 VSIG2Q96IQ7 327 aa10.52□□□□□ -0.73
SMPDL3A-201ENST00000368440 RAB5BP61020 215 aa10.51□□□□□ -0.73
SMPDL3A-201ENST00000368440 DNLZQ5SXM8 178 aa10.51□□□□□ -0.73
SMPDL3A-201ENST00000368440 TRAV9-1A0A075B6T8 112 aa10.51□□□□□ -0.73
SMPDL3A-201ENST00000368440 TRAV4A0A0B4J268 109 aa10.51□□□□□ -0.73
SMPDL3A-201ENST00000368440 ARMS2P0C7Q2 107 aa10.51□□□□□ -0.73
SMPDL3A-201ENST00000368440 CAMPP49913 170 aa10.51□□□□□ -0.73
SMPDL3A-201ENST00000368440 FABP9Q0Z7S8 132 aa10.51□□□□□ -0.73
SMPDL3A-201ENST00000368440 TRAPPC1Q9Y5R8 145 aa10.51□□□□□ -0.73
SMPDL3A-201ENST00000368440 P0DMU3 169 aa10.5□□□□□ -0.73
SMPDL3A-201ENST00000368440 FAM231AP0DMU4 169 aa10.5□□□□□ -0.73
SMPDL3A-201ENST00000368440 FAM231CP0DMU5 169 aa10.5□□□□□ -0.73
SMPDL3A-201ENST00000368440 OR4C5Q8NGB2 326 aa10.5□□□□□ -0.73
SMPDL3A-201ENST00000368440 KMT2AQ03164 3969 aa10.49□□□□□ -0.73
SMPDL3A-201ENST00000368440 XKRY2A2RUG3 117 aa10.49□□□□□ -0.73
SMPDL3A-201ENST00000368440 PTH2Q96A98 100 aa10.49□□□□□ -0.73
SMPDL3A-201ENST00000368440 GFRA4Q9GZZ7 299 aa10.49□□□□□ -0.73
SMPDL3A-201ENST00000368440 TRGV4A0A0C4DH28 118 aa10.49□□□□□ -0.73
SMPDL3A-201ENST00000368440 RS1O15537 224 aa10.49□□□□□ -0.73
SMPDL3A-201ENST00000368440 CRYBA4P53673 196 aa10.49□□□□□ -0.73
SMPDL3A-201ENST00000368440 CFAP126Q5VTH2 177 aa10.49□□□□□ -0.73
SMPDL3A-201ENST00000368440 PRO0255Q9UI72 69 aa10.49□□□□□ -0.73
SMPDL3A-201ENST00000368440 LYZL1Q6UWQ5 148 aa10.48□□□□□ -0.73
SMPDL3A-201ENST00000368440 JPT2Q9H910 190 aa10.48□□□□□ -0.73
SMPDL3A-201ENST00000368440 SCRT2Q9NQ03 307 aa10.48□□□□□ -0.73
SMPDL3A-201ENST00000368440 HHLA3Q9XRX5 114 aa10.48□□□□□ -0.73
SMPDL3A-201ENST00000368440 A0A096LPF7 62 aa10.47□□□□□ -0.73
SMPDL3A-201ENST00000368440 IGHV3-73A0A0B4J1V6 119 aa10.47□□□□□ -0.73
SMPDL3A-201ENST00000368440 H3BNG1 76 aa10.47□□□□□ -0.73
SMPDL3A-201ENST00000368440 PAX4O43316 350 aa10.47□□□□□ -0.73
SMPDL3A-201ENST00000368440 TRGC1P0CF51 173 aa10.47□□□□□ -0.73
SMPDL3A-201ENST00000368440 RPS20P60866 119 aaKnown RBP10.47□□□□□ -0.73
SMPDL3A-201ENST00000368440 DMRTA1Q5VZB9 504 aa10.47□□□□□ -0.73
SMPDL3A-201ENST00000368440 UBE2DNLQ8IWF7 75 aa10.47□□□□□ -0.73
SMPDL3A-201ENST00000368440 FER1L6-AS1Q8NA97 138 aa10.47□□□□□ -0.73
SMPDL3A-201ENST00000368440 SSBP4Q9BWG4 385 aaPredicted RBP10.47□□□□□ -0.73
SMPDL3A-201ENST00000368440 MRPL18Q9H0U6 180 aaKnown RBP10.47□□□□□ -0.73
SMPDL3A-201ENST00000368440 TMEM136Q6ZRR5 245 aa10.47□□□□□ -0.73
SMPDL3A-201ENST00000368440 FAM231BA6NCW3 169 aa10.46□□□□□ -0.74
SMPDL3A-201ENST00000368440 HBBP68871 147 aa10.46□□□□□ -0.74
SMPDL3A-201ENST00000368440 KIAA1644Q3SXP7 199 aa10.46□□□□□ -0.74
SMPDL3A-201ENST00000368440 PHLDA3Q9Y5J5 127 aa10.46□□□□□ -0.74
SMPDL3A-201ENST00000368440 A0A1B0GUT8 65 aa10.45□□□□□ -0.74
SMPDL3A-201ENST00000368440 M0R381 172 aa10.45□□□□□ -0.74
SMPDL3A-201ENST00000368440 HIST1H2BKO60814 126 aa10.45□□□□□ -0.74
SMPDL3A-201ENST00000368440 HIST1H2BJP06899 126 aa10.45□□□□□ -0.74
SMPDL3A-201ENST00000368440 GATA1P15976 413 aaPredicted RBP10.45□□□□□ -0.74
SMPDL3A-201ENST00000368440 HIST1H2BOP23527 126 aa10.45□□□□□ -0.74
SMPDL3A-201ENST00000368440 HIST1H2BBP33778 126 aa10.45□□□□□ -0.74
SMPDL3A-201ENST00000368440 HIST1H2BDP58876 126 aa10.45□□□□□ -0.74
SMPDL3A-201ENST00000368440 HIST1H2BCP62807 126 aa10.45□□□□□ -0.74
SMPDL3A-201ENST00000368440 HIST2H2BEQ16778 126 aa10.45□□□□□ -0.74
SMPDL3A-201ENST00000368440 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.45□□□□□ -0.74
SMPDL3A-201ENST00000368440 WDR73Q6P4I2 378 aa10.45□□□□□ -0.74
SMPDL3A-201ENST00000368440 HIST1H2BHQ93079 126 aa10.45□□□□□ -0.74
SMPDL3A-201ENST00000368440 BORCS7Q96B45 105 aa10.45□□□□□ -0.74
SMPDL3A-201ENST00000368440 HIST1H2BNQ99877 126 aa10.45□□□□□ -0.74
SMPDL3A-201ENST00000368440 HIST1H2BMQ99879 126 aa10.45□□□□□ -0.74
SMPDL3A-201ENST00000368440 GNB1LQ9BYB4 327 aa10.45□□□□□ -0.74
SMPDL3A-201ENST00000368440 SAMD10Q9BYL1 202 aa10.45□□□□□ -0.74
SMPDL3A-201ENST00000368440 LOC100131303A0A0U1RQF7 123 aa10.44□□□□□ -0.74
SMPDL3A-201ENST00000368440 PHOX2AO14813 284 aa10.44□□□□□ -0.74
SMPDL3A-201ENST00000368440 S100A6P06703 90 aa10.44□□□□□ -0.74
SMPDL3A-201ENST00000368440 MED14OSP0DP75 135 aa10.44□□□□□ -0.74
SMPDL3A-201ENST00000368440 NDUFA6P56556 154 aa10.44□□□□□ -0.74
SMPDL3A-201ENST00000368440 SLAQ13239 276 aa10.44□□□□□ -0.74
SMPDL3A-201ENST00000368440 OR10AG1Q8NH19 301 aa10.44□□□□□ -0.74
SMPDL3A-201ENST00000368440 LINC00588Q9Y4M8 146 aa10.44□□□□□ -0.74
SMPDL3A-201ENST00000368440 DNAH6Q9C0G6 4158 aa10.44□□□□□ -0.74
SMPDL3A-201ENST00000368440 A0A1B0GXF2 115 aa10.44□□□□□ -0.74
SMPDL3A-201ENST00000368440 SNAI2O43623 268 aa10.44□□□□□ -0.74
SMPDL3A-201ENST00000368440 FOXA3P55318 350 aaPredicted RBP10.44□□□□□ -0.74
SMPDL3A-201ENST00000368440 PIK3CD-AS1Q5SR53 167 aa10.44□□□□□ -0.74
SMPDL3A-201ENST00000368440 ATP5L2Q7Z4Y8 100 aa10.44□□□□□ -0.74
SMPDL3A-201ENST00000368440 ICOSQ9Y6W8 199 aa10.44□□□□□ -0.74
SMPDL3A-201ENST00000368440 A8MWV9 139 aa10.43□□□□□ -0.74
SMPDL3A-201ENST00000368440 IGLC6P0CF74 106 aa10.43□□□□□ -0.74
SMPDL3A-201ENST00000368440 GYPEP15421 78 aa10.43□□□□□ -0.74
SMPDL3A-201ENST00000368440 RIGQ13278 110 aa10.43□□□□□ -0.74
SMPDL3A-201ENST00000368440 ESRGQ1W209 222 aa10.43□□□□□ -0.74
SMPDL3A-201ENST00000368440 SYT8Q8NBV8 401 aa10.43□□□□□ -0.74
SMPDL3A-201ENST00000368440 K7EQD1 137 aa10.42□□□□□ -0.74
SMPDL3A-201ENST00000368440 HLA-DQA1P01909 254 aa10.42□□□□□ -0.74
SMPDL3A-201ENST00000368440 APCSP02743 223 aa10.42□□□□□ -0.74
SMPDL3A-201ENST00000368440 SNRPEP62304 92 aaKnown RBP10.42□□□□□ -0.74
SMPDL3A-201ENST00000368440 TWIST1Q15672 202 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms