RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 TMEM78Q5T7P6 136 aa5.89□□□□□ -1.47
CCL28-201ENST00000361115 PLA2G2DQ9UNK4 145 aa5.89□□□□□ -1.47
CCL28-201ENST00000361115 V9GYY9 64 aa5.89□□□□□ -1.47
CCL28-201ENST00000361115 CNTFRP26992 372 aa5.89□□□□□ -1.47
CCL28-201ENST00000361115 ZFP2Q6ZN57 461 aa5.89□□□□□ -1.47
CCL28-201ENST00000361115 DNAJC30Q96LL9 226 aa5.89□□□□□ -1.47
CCL28-201ENST00000361115 ROS1P08922 2347 aa5.89□□□□□ -1.47
CCL28-201ENST00000361115 NDUFA3O95167 84 aa5.88□□□□□ -1.47
CCL28-201ENST00000361115 PSMB2P49721 201 aa5.88□□□□□ -1.47
CCL28-201ENST00000361115 ZNF80P51504 273 aaPredicted RBP5.88□□□□□ -1.47
CCL28-201ENST00000361115 UBE2E1P51965 193 aa5.88□□□□□ -1.47
CCL28-201ENST00000361115 CCL17Q92583 94 aa5.88□□□□□ -1.47
CCL28-201ENST00000361115 RNF7Q9UBF6 113 aa5.88□□□□□ -1.47
CCL28-201ENST00000361115 SIGLEC9Q9Y336 463 aa5.88□□□□□ -1.47
CCL28-201ENST00000361115 FCN3O75636 299 aa5.88□□□□□ -1.47
CCL28-201ENST00000361115 ATP5LO75964 103 aa5.88□□□□□ -1.47
CCL28-201ENST00000361115 Q6ZSV7 163 aa5.88□□□□□ -1.47
CCL28-201ENST00000361115 CTSZQ9UBR2 303 aa5.88□□□□□ -1.47
CCL28-201ENST00000361115 IGKV2-40A0A087WW87 121 aaPredicted RBP5.88□□□□□ -1.47
CCL28-201ENST00000361115 LYNX1G3V0Z9 82 aa5.88□□□□□ -1.47
CCL28-201ENST00000361115 IGKV1-17P01599 117 aa5.88□□□□□ -1.47
CCL28-201ENST00000361115 IGKV2D-40P01614 121 aaPredicted RBP5.88□□□□□ -1.47
CCL28-201ENST00000361115 IGLC6P0CF74 106 aa5.88□□□□□ -1.47
CCL28-201ENST00000361115 LYNX1P0DP58 116 aa5.88□□□□□ -1.47
CCL28-201ENST00000361115 RPL7P18124 248 aaKnown RBP5.88□□□□□ -1.47
CCL28-201ENST00000361115 ANXA2RQ3ZCQ2 193 aa5.88□□□□□ -1.47
CCL28-201ENST00000361115 OR13C6PQ8NH95 151 aa5.88□□□□□ -1.47
CCL28-201ENST00000361115 DLX4Q92988 240 aaPredicted RBP5.88□□□□□ -1.47
CCL28-201ENST00000361115 KIR2DL4Q99706 377 aa5.88□□□□□ -1.47
CCL28-201ENST00000361115 SHANK2-AS3Q9BTD1 123 aa5.88□□□□□ -1.47
CCL28-201ENST00000361115 LINC01549A6NIU2 74 aa5.87□□□□□ -1.47
CCL28-201ENST00000361115 MRPS12O15235 138 aaKnown RBP5.87□□□□□ -1.47
CCL28-201ENST00000361115 RPL27AP46776 148 aaKnown RBP5.87□□□□□ -1.47
CCL28-201ENST00000361115 VMA21Q3ZAQ7 101 aa5.87□□□□□ -1.47
CCL28-201ENST00000361115 Q8TAT8 98 aa5.87□□□□□ -1.47
CCL28-201ENST00000361115 BAALCQ8WXS3 180 aa5.87□□□□□ -1.47
CCL28-201ENST00000361115 IGLV2-18A0A075B6J9 118 aa5.87□□□□□ -1.47
CCL28-201ENST00000361115 LOC107984156A0A0G2JMH3 177 aa5.87□□□□□ -1.47
CCL28-201ENST00000361115 H3BRN7 92 aa5.87□□□□□ -1.47
CCL28-201ENST00000361115 IL4P05112 153 aa5.87□□□□□ -1.47
CCL28-201ENST00000361115 FAM19A5Q7Z5A7 132 aaPredicted RBP5.87□□□□□ -1.47
CCL28-201ENST00000361115 ARL17AQ8IVW1 177 aa5.87□□□□□ -1.47
CCL28-201ENST00000361115 PPDPFLQ8WWR9 84 aa5.87□□□□□ -1.47
CCL28-201ENST00000361115 RPEQ96AT9 228 aa5.87□□□□□ -1.47
CCL28-201ENST00000361115 KRTAP3-3Q9BYR6 98 aa5.87□□□□□ -1.47
CCL28-201ENST00000361115 KRTAP3-2Q9BYR7 98 aa5.87□□□□□ -1.47
CCL28-201ENST00000361115 NXT2Q9NPJ8 142 aaKnown RBP5.87□□□□□ -1.47
CCL28-201ENST00000361115 CCDC179H3BU77 68 aa5.86□□□□□ -1.47
CCL28-201ENST00000361115 RASL11BQ9BPW5 248 aa5.86□□□□□ -1.47
CCL28-201ENST00000361115 ZNF580Q9UK33 172 aa5.86□□□□□ -1.47
CCL28-201ENST00000361115 SONP18583 2426 aaKnown RBP5.86□□□□□ -1.47
CCL28-201ENST00000361115 TINCRA0A1B0GVN0 87 aa5.86□□□□□ -1.47
CCL28-201ENST00000361115 LGALS1P09382 135 aaKnown RBP5.86□□□□□ -1.47
CCL28-201ENST00000361115 RPL11P62913 178 aaKnown RBP5.86□□□□□ -1.47
CCL28-201ENST00000361115 LINC00482Q8N8I6 264 aa5.86□□□□□ -1.47
CCL28-201ENST00000361115 Q8N8P6 123 aa5.86□□□□□ -1.47
CCL28-201ENST00000361115 MYMXA0A1B0GTQ4 84 aa5.85□□□□□ -1.47
CCL28-201ENST00000361115 NCBP2LA6PVI3 153 aaKnown RBP5.85□□□□□ -1.47
CCL28-201ENST00000361115 I3L2K1 104 aa5.85□□□□□ -1.47
CCL28-201ENST00000361115 NBR2O15453 112 aa5.85□□□□□ -1.47
CCL28-201ENST00000361115 IGHV4-38-2P0DP08 117 aa5.85□□□□□ -1.47
CCL28-201ENST00000361115 TMEM30BQ3MIR4 351 aa5.85□□□□□ -1.47
CCL28-201ENST00000361115 TMEM200BQ69YZ2 307 aa5.85□□□□□ -1.47
CCL28-201ENST00000361115 ZFAND6Q6FIF0 208 aa5.85□□□□□ -1.47
CCL28-201ENST00000361115 SPANXA1Q9NS26 97 aa5.85□□□□□ -1.47
CCL28-201ENST00000361115 TEX22C9J3V5 150 aa5.85□□□□□ -1.47
CCL28-201ENST00000361115 IGFL4Q6B9Z1 124 aa5.85□□□□□ -1.47
CCL28-201ENST00000361115 TEN1Q86WV5 123 aa5.85□□□□□ -1.47
CCL28-201ENST00000361115 LYPD1Q8N2G4 141 aa5.85□□□□□ -1.47
CCL28-201ENST00000361115 FAM110DQ8TAY7 271 aaPredicted RBP5.85□□□□□ -1.47
CCL28-201ENST00000361115 DUX3Q96PT4 197 aa5.85□□□□□ -1.47
CCL28-201ENST00000361115 PRR25Q96S07 402 aa5.85□□□□□ -1.47
CCL28-201ENST00000361115 TMEM126AQ9H061 195 aa5.85□□□□□ -1.47
CCL28-201ENST00000361115 STAB1Q9NY15 2570 aa5.85□□□□□ -1.47
CCL28-201ENST00000361115 LINC01619G3V211 115 aa5.85□□□□□ -1.47
CCL28-201ENST00000361115 NPFFO15130 113 aa5.85□□□□□ -1.47
CCL28-201ENST00000361115 ZNF491Q8N8L2 437 aa5.85□□□□□ -1.47
CCL28-201ENST00000361115 IL17DQ8TAD2 202 aa5.85□□□□□ -1.47
CCL28-201ENST00000361115 MYOZ3Q8TDC0 251 aa5.85□□□□□ -1.47
CCL28-201ENST00000361115 PLEKHB2Q96CS7 222 aa5.85□□□□□ -1.47
CCL28-201ENST00000361115 S4R3C0 116 aa5.85□□□□□ -1.47
CCL28-201ENST00000361115 TRAV26-2A0A0B4J265 109 aa5.84□□□□□ -1.47
CCL28-201ENST00000361115 TCL1BO95988 128 aa5.84□□□□□ -1.47
CCL28-201ENST00000361115 TRGV3P03979 118 aa5.84□□□□□ -1.47
CCL28-201ENST00000361115 ZNF688P0C7X2 276 aa5.84□□□□□ -1.47
CCL28-201ENST00000361115 EMP1P54849 157 aa5.84□□□□□ -1.47
CCL28-201ENST00000361115 DLX1P56177 255 aa5.84□□□□□ -1.47
CCL28-201ENST00000361115 UBE2D3P61077 147 aa5.84□□□□□ -1.47
CCL28-201ENST00000361115 UBE2D2P62837 147 aa5.84□□□□□ -1.47
CCL28-201ENST00000361115 PRB3Q04118 309 aaPredicted RBP5.84□□□□□ -1.47
CCL28-201ENST00000361115 ATRQ13535 2644 aa5.84□□□□□ -1.47
CCL28-201ENST00000361115 LOC107984640A0A0U1RRK4 108 aa5.84□□□□□ -1.47
CCL28-201ENST00000361115 FAM229AH3BQW9 127 aa5.84□□□□□ -1.47
CCL28-201ENST00000361115 HLA-DMBP28068 263 aa5.84□□□□□ -1.47
CCL28-201ENST00000361115 UBE2D1P51668 147 aa5.84□□□□□ -1.47
CCL28-201ENST00000361115 MINOS1Q5TGZ0 78 aa5.84□□□□□ -1.47
CCL28-201ENST00000361115 ANKRD29Q8N6D5 301 aa5.84□□□□□ -1.47
CCL28-201ENST00000361115 MINOS1-NBL1R4GNA1 71 aa5.84□□□□□ -1.47
CCL28-201ENST00000361115 OOSP1A8MZH6 123 aa5.83□□□□□ -1.48
CCL28-201ENST00000361115 ZNF415Q09FC8 603 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms