RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 TRAV26-1A0A087WT03 109 aa12.39□□□□□ -0.43
COL18A1-203ENST00000359759 IGHV7-81A0A0B4J1V7 117 aa12.39□□□□□ -0.43
COL18A1-203ENST00000359759 NCKAP5O14513 1909 aa12.39□□□□□ -0.43
COL18A1-203ENST00000359759 VWA8A3KMH1 1905 aa12.39□□□□□ -0.43
COL18A1-203ENST00000359759 LY6G6EA0A0G2JKS1 128 aa12.39□□□□□ -0.43
COL18A1-203ENST00000359759 C11orf53Q8IXP5 236 aa12.39□□□□□ -0.43
COL18A1-203ENST00000359759 U3KQA8 63 aa12.39□□□□□ -0.43
COL18A1-203ENST00000359759 POU2AF1Q16633 256 aa12.39□□□□□ -0.43
COL18A1-203ENST00000359759 FANCD2OSQ96PS1 177 aa12.39□□□□□ -0.43
COL18A1-203ENST00000359759 UPK3BQ9BT76 320 aa12.39□□□□□ -0.43
COL18A1-203ENST00000359759 CADP27708 2225 aa12.38□□□□□ -0.43
COL18A1-203ENST00000359759 TRBV7-3A0A075B6L6 115 aa12.38□□□□□ -0.43
COL18A1-203ENST00000359759 K7EIM0 57 aa12.38□□□□□ -0.43
COL18A1-203ENST00000359759 LENEPQ9Y5L5 61 aa12.38□□□□□ -0.43
COL18A1-203ENST00000359759 A0A0U1RQV1 116 aa12.38□□□□□ -0.43
COL18A1-203ENST00000359759 C16orf54Q6UWD8 224 aa12.38□□□□□ -0.43
COL18A1-203ENST00000359759 DYSFO75923 2080 aa12.38□□□□□ -0.43
COL18A1-203ENST00000359759 LYPD6Q86Y78 171 aa12.38□□□□□ -0.43
COL18A1-203ENST00000359759 C11orf86A6NJI1 115 aa12.38□□□□□ -0.43
COL18A1-203ENST00000359759 CEMP1Q6PRD7 247 aaPredicted RBP12.38□□□□□ -0.43
COL18A1-203ENST00000359759 FRMD6-AS1P0C7T7 363 aa12.38□□□□□ -0.43
COL18A1-203ENST00000359759 PLA2G2EQ9NZK7 142 aa12.38□□□□□ -0.43
COL18A1-203ENST00000359759 FGF23Q9GZV9 251 aaPredicted RBP12.37□□□□□ -0.43
COL18A1-203ENST00000359759 JMJD7-PLA2G4BH0Y9G9 81 aa12.37□□□□□ -0.43
COL18A1-203ENST00000359759 SPTA1P02549 2419 aa12.37□□□□□ -0.43
COL18A1-203ENST00000359759 ZSWIM8A7E2V4 1837 aa12.37□□□□□ -0.43
COL18A1-203ENST00000359759 KLK12Q9UKR0 248 aa12.37□□□□□ -0.43
COL18A1-203ENST00000359759 E9PLD3 99 aa12.36□□□□□ -0.43
COL18A1-203ENST00000359759 SPAG11BQ08648 103 aa12.36□□□□□ -0.43
COL18A1-203ENST00000359759 IL15RAQ13261 267 aa12.36□□□□□ -0.43
COL18A1-203ENST00000359759 IGLV3-1P01715 115 aa12.36□□□□□ -0.43
COL18A1-203ENST00000359759 SIP14410 1827 aa12.36□□□□□ -0.43
COL18A1-203ENST00000359759 SCXQ7RTU7 201 aa12.36□□□□□ -0.43
COL18A1-203ENST00000359759 KAAG1Q9UBP8 84 aa12.36□□□□□ -0.43
COL18A1-203ENST00000359759 TMEM256-PLSCR3K7ERE1 68 aa12.36□□□□□ -0.43
COL18A1-203ENST00000359759 RLFQ13129 1914 aa12.36□□□□□ -0.43
COL18A1-203ENST00000359759 IGFL3Q6UXB1 125 aa12.35□□□□□ -0.43
COL18A1-203ENST00000359759 TCL1BO95988 128 aa12.35□□□□□ -0.43
COL18A1-203ENST00000359759 CTSGP08311 255 aa12.35□□□□□ -0.43
COL18A1-203ENST00000359759 PKIGQ9Y2B9 76 aa12.35□□□□□ -0.43
COL18A1-203ENST00000359759 IGLV11-55A0A075B6I3 123 aa12.35□□□□□ -0.43
COL18A1-203ENST00000359759 SDIM1Q6ZPB5 146 aa12.35□□□□□ -0.43
COL18A1-203ENST00000359759 IGHV4-30-2A0A087WSY4 118 aa12.34□□□□□ -0.43
COL18A1-203ENST00000359759 IGHV4-61A0A0C4DH41 118 aa12.34□□□□□ -0.43
COL18A1-203ENST00000359759 DEFB135Q30KP9 77 aa12.34□□□□□ -0.43
COL18A1-203ENST00000359759 H3BQ85 93 aa12.34□□□□□ -0.43
COL18A1-203ENST00000359759 SPTBN2O15020 2390 aa12.33□□□□□ -0.43
COL18A1-203ENST00000359759 NRGNQ92686 78 aa12.33□□□□□ -0.44
COL18A1-203ENST00000359759 FNDC1Q4ZHG4 1894 aaPredicted RBP12.33□□□□□ -0.44
COL18A1-203ENST00000359759 HIGD1BQ9P298 99 aa12.33□□□□□ -0.44
COL18A1-203ENST00000359759 MDFICQ9P1T7 246 aa12.33□□□□□ -0.44
COL18A1-203ENST00000359759 P0DMU3 169 aa12.33□□□□□ -0.44
COL18A1-203ENST00000359759 FAM231AP0DMU4 169 aa12.33□□□□□ -0.44
COL18A1-203ENST00000359759 FAM231CP0DMU5 169 aa12.33□□□□□ -0.44
COL18A1-203ENST00000359759 RNF152Q8N8N0 203 aa12.33□□□□□ -0.44
COL18A1-203ENST00000359759 A0A096LNI7 61 aa12.32□□□□□ -0.44
COL18A1-203ENST00000359759 DOPEY2Q9Y3R5 2298 aa12.32□□□□□ -0.44
COL18A1-203ENST00000359759 ODF1Q14990 250 aa12.32□□□□□ -0.44
COL18A1-203ENST00000359759 RNF138Q8WVD3 245 aa12.32□□□□□ -0.44
COL18A1-203ENST00000359759 IGKV1-17P01599 117 aa12.32□□□□□ -0.44
COL18A1-203ENST00000359759 COX7BP24311 80 aa12.32□□□□□ -0.44
COL18A1-203ENST00000359759 TEX22C9J3V5 150 aa12.32□□□□□ -0.44
COL18A1-203ENST00000359759 CASC2Q6XLA1 102 aa12.32□□□□□ -0.44
COL18A1-203ENST00000359759 IGHV1-58A0A0C4DH39 117 aa12.31□□□□□ -0.44
COL18A1-203ENST00000359759 C5orf56Q8N8D9 126 aa12.31□□□□□ -0.44
COL18A1-203ENST00000359759 PLXNA4Q9HCM2 1894 aa12.31□□□□□ -0.44
COL18A1-203ENST00000359759 IGKV2-24A0A0C4DH68 120 aa12.31□□□□□ -0.44
COL18A1-203ENST00000359759 C2orf70A6NJV1 201 aa12.31□□□□□ -0.44
COL18A1-203ENST00000359759 Q6ZUT4 128 aa12.31□□□□□ -0.44
COL18A1-203ENST00000359759 NDUFA11Q86Y39 141 aa12.31□□□□□ -0.44
COL18A1-203ENST00000359759 A0A0J9YWU9 116 aa12.3□□□□□ -0.44
COL18A1-203ENST00000359759 COA6Q5JTJ3 125 aaKnown RBP12.3□□□□□ -0.44
COL18A1-203ENST00000359759 TNRC6AQ8NDV7 1962 aaKnown RBP12.3□□□□□ -0.44
COL18A1-203ENST00000359759 NACAE9PAV3 2078 aa12.3□□□□□ -0.44
COL18A1-203ENST00000359759 FAM167A-AS1Q96KT0 104 aa12.3□□□□□ -0.44
COL18A1-203ENST00000359759 SIRPDQ9H106 197 aa12.3□□□□□ -0.44
COL18A1-203ENST00000359759 SLPIP03973 132 aa12.3□□□□□ -0.44
COL18A1-203ENST00000359759 CACNA1EQ15878 2313 aa12.3□□□□□ -0.44
COL18A1-203ENST00000359759 MT-ATP8P03928 68 aa12.29□□□□□ -0.44
COL18A1-203ENST00000359759 Q8N9W7 124 aa12.29□□□□□ -0.44
COL18A1-203ENST00000359759 BPY2O14599 106 aa12.29□□□□□ -0.44
COL18A1-203ENST00000359759 TMEM263Q8WUH6 116 aaKnown RBP12.29□□□□□ -0.44
COL18A1-203ENST00000359759 B9D2Q9BPU9 175 aa12.29□□□□□ -0.44
COL18A1-203ENST00000359759 LOXL1Q08397 574 aaPredicted RBP12.28□□□□□ -0.44
COL18A1-203ENST00000359759 C20orf197Q8N268 126 aa12.28□□□□□ -0.44
COL18A1-203ENST00000359759 TEX49A0A1B0GTD5 131 aa12.28□□□□□ -0.44
COL18A1-203ENST00000359759 H3BT86 120 aa12.28□□□□□ -0.44
COL18A1-203ENST00000359759 KIAA1671Q9BY89 1806 aa12.28□□□□□ -0.44
COL18A1-203ENST00000359759 DEFB113Q30KQ7 82 aa12.28□□□□□ -0.44
COL18A1-203ENST00000359759 LRCOL1A6NCL2 159 aa12.28□□□□□ -0.44
COL18A1-203ENST00000359759 SPATA12Q7Z6I5 190 aa12.28□□□□□ -0.44
COL18A1-203ENST00000359759 NDUFV3P56181 108 aaKnown RBP12.28□□□□□ -0.44
COL18A1-203ENST00000359759 TP53TG3Q9ULZ0 132 aa12.28□□□□□ -0.44
COL18A1-203ENST00000359759 E7EUB6 86 aa12.27□□□□□ -0.44
COL18A1-203ENST00000359759 PLA2G5P39877 138 aa12.27□□□□□ -0.44
COL18A1-203ENST00000359759 WFDC10BQ8IUB3 73 aa12.27□□□□□ -0.45
COL18A1-203ENST00000359759 MIAQ16674 131 aa12.26□□□□□ -0.45
COL18A1-203ENST00000359759 CXCL5P42830 114 aa12.26□□□□□ -0.45
COL18A1-203ENST00000359759 ENHOQ6UWT2 76 aa12.26□□□□□ -0.45
COL18A1-203ENST00000359759 EP300Q09472 2414 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms