RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 UNQ9165/PRO28630Q6UXU0 137 aa9.44□□□□□ -0.9
COL20A1-201ENST00000358894 CCDC140Q96MF4 163 aa9.44□□□□□ -0.9
COL20A1-201ENST00000358894 IGHV4-59P01825 116 aa9.43□□□□□ -0.9
COL20A1-201ENST00000358894 LMO4P61968 165 aa9.43□□□□□ -0.9
COL20A1-201ENST00000358894 C15orf53Q8NAA6 179 aa9.43□□□□□ -0.9
COL20A1-201ENST00000358894 NTN5Q8WTR8 489 aaPredicted RBP9.43□□□□□ -0.9
COL20A1-201ENST00000358894 TP53TG1Q9Y2A0 90 aa9.43□□□□□ -0.9
COL20A1-201ENST00000358894 KNCNA6PVL3 124 aa9.43□□□□□ -0.9
COL20A1-201ENST00000358894 VCYO14598 125 aa9.43□□□□□ -0.9
COL20A1-201ENST00000358894 C19orf54Q5BKX5 351 aa9.43□□□□□ -0.9
COL20A1-201ENST00000358894 IGHV7-4-1A0A0J9YVY3 117 aa9.43□□□□□ -0.9
COL20A1-201ENST00000358894 TRBV6-1A0A0K0K1D8 114 aa9.43□□□□□ -0.9
COL20A1-201ENST00000358894 C19orf84I3L1E1 186 aa9.43□□□□□ -0.9
COL20A1-201ENST00000358894 ABCA12Q86UK0 2595 aa9.42□□□□□ -0.9
COL20A1-201ENST00000358894 FREM2Q5SZK8 3169 aa9.42□□□□□ -0.9
COL20A1-201ENST00000358894 RS1O15537 224 aa9.42□□□□□ -0.9
COL20A1-201ENST00000358894 RPL39LQ96EH5 51 aaKnown RBP9.42□□□□□ -0.9
COL20A1-201ENST00000358894 RBAKDNA6NC62 111 aa9.42□□□□□ -0.9
COL20A1-201ENST00000358894 DEFB131AP59861 70 aa9.42□□□□□ -0.9
COL20A1-201ENST00000358894 SPANXB1Q9NS25 103 aaPredicted RBP9.42□□□□□ -0.9
COL20A1-201ENST00000358894 SLC25A20O43772 301 aa9.42□□□□□ -0.9
COL20A1-201ENST00000358894 CD28P10747 220 aa9.42□□□□□ -0.9
COL20A1-201ENST00000358894 LINC01356Q8N9X3 169 aa9.42□□□□□ -0.9
COL20A1-201ENST00000358894 AJUBAQ96IF1 538 aa9.42□□□□□ -0.9
COL20A1-201ENST00000358894 MYMXA0A1B0GTQ4 84 aa9.41□□□□□ -0.9
COL20A1-201ENST00000358894 FGF6P10767 208 aa9.41□□□□□ -0.9
COL20A1-201ENST00000358894 DSCR9P59020 149 aa9.41□□□□□ -0.9
COL20A1-201ENST00000358894 SDHAF1A6NFY7 115 aa9.41□□□□□ -0.9
COL20A1-201ENST00000358894 Q6ZUT4 128 aa9.41□□□□□ -0.9
COL20A1-201ENST00000358894 TMEM101Q96IK0 257 aa9.41□□□□□ -0.9
COL20A1-201ENST00000358894 TRGV11A0A075B6L2 103 aa9.41□□□□□ -0.9
COL20A1-201ENST00000358894 DEFB112Q30KQ8 113 aa9.41□□□□□ -0.9
COL20A1-201ENST00000358894 PEMTQ9UBM1 199 aa9.41□□□□□ -0.9
COL20A1-201ENST00000358894 F8VRH5 84 aa9.4□□□□□ -0.9
COL20A1-201ENST00000358894 M0R2P5 195 aa9.4□□□□□ -0.9
COL20A1-201ENST00000358894 TOMM7Q9P0U1 55 aa9.4□□□□□ -0.9
COL20A1-201ENST00000358894 SMAD5-AS1Q9Y6J3 95 aa9.4□□□□□ -0.9
COL20A1-201ENST00000358894 ATXN8Q156A1 80 aa9.4□□□□□ -0.91
COL20A1-201ENST00000358894 TAL2Q16559 108 aa9.4□□□□□ -0.91
COL20A1-201ENST00000358894 C11orf71Q6IPW1 123 aa9.4□□□□□ -0.91
COL20A1-201ENST00000358894 ZNF493Q6ZR52 646 aa9.4□□□□□ -0.91
COL20A1-201ENST00000358894 UBE2L6O14933 153 aa9.39□□□□□ -0.91
COL20A1-201ENST00000358894 TEN1Q86WV5 123 aa9.39□□□□□ -0.91
COL20A1-201ENST00000358894 KLHL30-AS1Q8NEE0 82 aa9.39□□□□□ -0.91
COL20A1-201ENST00000358894 PMVKQ15126 192 aa9.39□□□□□ -0.91
COL20A1-201ENST00000358894 FSTL3O95633 263 aa9.39□□□□□ -0.91
COL20A1-201ENST00000358894 MRPL53Q96EL3 112 aaKnown RBP9.39□□□□□ -0.91
COL20A1-201ENST00000358894 ZNF625Q96I27 306 aaPredicted RBP9.39□□□□□ -0.91
COL20A1-201ENST00000358894 SPXQ9BT56 116 aa9.39□□□□□ -0.91
COL20A1-201ENST00000358894 IGF1P05019 195 aa9.38□□□□□ -0.91
COL20A1-201ENST00000358894 MRPL23Q16540 153 aaKnown RBP9.38□□□□□ -0.91
COL20A1-201ENST00000358894 MRGPRG-AS1Q2M3A8 158 aa9.38□□□□□ -0.91
COL20A1-201ENST00000358894 URB1-AS1Q96HZ7 61 aa9.38□□□□□ -0.91
COL20A1-201ENST00000358894 C10orf105Q8TEF2 133 aa9.38□□□□□ -0.91
COL20A1-201ENST00000358894 BOD1L1Q8NFC6 3051 aa9.38□□□□□ -0.91
COL20A1-201ENST00000358894 STHQ8IWL8 128 aa9.38□□□□□ -0.91
COL20A1-201ENST00000358894 H3BMM0 161 aa9.38□□□□□ -0.91
COL20A1-201ENST00000358894 UBE2WQ96B02 151 aa9.38□□□□□ -0.91
COL20A1-201ENST00000358894 UBE2E2Q96LR5 201 aa9.38□□□□□ -0.91
COL20A1-201ENST00000358894 USP34Q70CQ2 3546 aa9.37□□□□□ -0.91
COL20A1-201ENST00000358894 A0A087WX48 190 aa9.37□□□□□ -0.91
COL20A1-201ENST00000358894 ADARB2-AS1A8MUL3 147 aa9.37□□□□□ -0.91
COL20A1-201ENST00000358894 IGLC6P0CF74 106 aa9.37□□□□□ -0.91
COL20A1-201ENST00000358894 GAGE2AQ6NT46 116 aa9.37□□□□□ -0.91
COL20A1-201ENST00000358894 PHLDA1Q8WV24 401 aaPredicted RBP9.37□□□□□ -0.91
COL20A1-201ENST00000358894 EBI3Q14213 229 aa9.37□□□□□ -0.91
COL20A1-201ENST00000358894 DEFB136Q30KP8 78 aa9.37□□□□□ -0.91
COL20A1-201ENST00000358894 ZFAND3Q9H8U3 227 aa9.37□□□□□ -0.91
COL20A1-201ENST00000358894 LENEPQ9Y5L5 61 aa9.37□□□□□ -0.91
COL20A1-201ENST00000358894 HIVEP2P31629 2446 aa9.37□□□□□ -0.91
COL20A1-201ENST00000358894 ZNF292O60281 2723 aa9.37□□□□□ -0.91
COL20A1-201ENST00000358894 C9orf47Q6ZRZ4 202 aa9.37□□□□□ -0.91
COL20A1-201ENST00000358894 INSL3P51460 131 aa9.36□□□□□ -0.91
COL20A1-201ENST00000358894 C2orf91Q6ZV80 131 aa9.36□□□□□ -0.91
COL20A1-201ENST00000358894 PRO1854Q9UHT4 67 aa9.36□□□□□ -0.91
COL20A1-201ENST00000358894 PTPRBP23467 1997 aa9.36□□□□□ -0.91
COL20A1-201ENST00000358894 PKD1L2Q7Z442 2459 aa9.36□□□□□ -0.91
COL20A1-201ENST00000358894 MTORP42345 2549 aa9.36□□□□□ -0.91
COL20A1-201ENST00000358894 IGHV1OR15-1A0A075B7D0 117 aa9.36□□□□□ -0.91
COL20A1-201ENST00000358894 A0A1W2PPR1 153 aa9.36□□□□□ -0.91
COL20A1-201ENST00000358894 IGHV3-53P01767 116 aa9.36□□□□□ -0.91
COL20A1-201ENST00000358894 GATA3P23771 443 aa9.36□□□□□ -0.91
COL20A1-201ENST00000358894 PRB1P04280 392 aa9.36□□□□□ -0.91
COL20A1-201ENST00000358894 HIST1H4AP62805 103 aaKnown RBP9.36□□□□□ -0.91
COL20A1-201ENST00000358894 UFSP1Q6NVU6 142 aa9.36□□□□□ -0.91
COL20A1-201ENST00000358894 TRGV2A0A075B6R0 118 aa9.35□□□□□ -0.91
COL20A1-201ENST00000358894 GAS8-AS1O95177 125 aa9.35□□□□□ -0.91
COL20A1-201ENST00000358894 ODF1Q14990 250 aa9.35□□□□□ -0.91
COL20A1-201ENST00000358894 IGHV3-16A0A0C4DH30 117 aa9.35□□□□□ -0.91
COL20A1-201ENST00000358894 Q8N6K4 173 aa9.35□□□□□ -0.91
COL20A1-201ENST00000358894 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.34□□□□□ -0.91
COL20A1-201ENST00000358894 HIGD1BQ9P298 99 aa9.34□□□□□ -0.91
COL20A1-201ENST00000358894 XCL2Q9UBD3 114 aa9.34□□□□□ -0.91
COL20A1-201ENST00000358894 JPT2Q9H910 190 aa9.34□□□□□ -0.91
COL20A1-201ENST00000358894 H3BUA1 57 aa9.34□□□□□ -0.91
COL20A1-201ENST00000358894 IGHG2P01859 326 aa9.34□□□□□ -0.91
COL20A1-201ENST00000358894 TRGV1A0A0A0MS02 117 aa9.34□□□□□ -0.91
COL20A1-201ENST00000358894 RPL32P62910 135 aaKnown RBP9.34□□□□□ -0.91
COL20A1-201ENST00000358894 SPATA25Q9BR10 227 aa9.34□□□□□ -0.91
COL20A1-201ENST00000358894 IGKV2D-26A0A0A0MRZ7 120 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 99.5 ms