RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 C1orf147Q96MC9 270 aaPredicted RBP8.68□□□□□ -1.02
COL11A1-202ENST00000358392 DSCAML1Q8TD84 2053 aa8.68□□□□□ -1.02
COL11A1-202ENST00000358392 GRNP28799 593 aaKnown RBP8.68□□□□□ -1.02
COL11A1-202ENST00000358392 PKIGQ9Y2B9 76 aa8.68□□□□□ -1.02
COL11A1-202ENST00000358392 SDIM1Q6ZPB5 146 aa8.68□□□□□ -1.02
COL11A1-202ENST00000358392 AJUBAQ96IF1 538 aa8.67□□□□□ -1.02
COL11A1-202ENST00000358392 TRBV10-2A0A0K0K1G8 114 aa8.67□□□□□ -1.02
COL11A1-202ENST00000358392 PROK2Q9HC23 129 aa8.67□□□□□ -1.02
COL11A1-202ENST00000358392 KLK12Q9UKR0 248 aa8.67□□□□□ -1.02
COL11A1-202ENST00000358392 CACNA1EQ15878 2313 aa8.67□□□□□ -1.02
COL11A1-202ENST00000358392 OBSL1O75147 1896 aa8.67□□□□□ -1.02
COL11A1-202ENST00000358392 C9orf66Q5T8R8 295 aa8.67□□□□□ -1.02
COL11A1-202ENST00000358392 G3V4G9 280 aa8.67□□□□□ -1.02
COL11A1-202ENST00000358392 TAX1BP3O14907 124 aa8.67□□□□□ -1.02
COL11A1-202ENST00000358392 NFE4Q86UQ8 179 aa8.67□□□□□ -1.02
COL11A1-202ENST00000358392 WDR90Q96KV7 1748 aa8.67□□□□□ -1.02
COL11A1-202ENST00000358392 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.67□□□□□ -1.02
COL11A1-202ENST00000358392 PRAC2D3DTV9 90 aa8.66□□□□□ -1.02
COL11A1-202ENST00000358392 CEMP1Q6PRD7 247 aaPredicted RBP8.66□□□□□ -1.02
COL11A1-202ENST00000358392 RNF138Q8WVD3 245 aa8.66□□□□□ -1.02
COL11A1-202ENST00000358392 SPTBN2O15020 2390 aa8.66□□□□□ -1.02
COL11A1-202ENST00000358392 LINC01545Q5VT33 79 aa8.66□□□□□ -1.02
COL11A1-202ENST00000358392 FNDC1Q4ZHG4 1894 aaPredicted RBP8.66□□□□□ -1.02
COL11A1-202ENST00000358392 GTSF1Q8WW33 167 aa8.66□□□□□ -1.02
COL11A1-202ENST00000358392 TOMM6Q96B49 74 aa8.66□□□□□ -1.02
COL11A1-202ENST00000358392 CTSZQ9UBR2 303 aa8.66□□□□□ -1.02
COL11A1-202ENST00000358392 IGKV2-24A0A0C4DH68 120 aa8.66□□□□□ -1.02
COL11A1-202ENST00000358392 BLCAPP62952 87 aa8.66□□□□□ -1.02
COL11A1-202ENST00000358392 FGF23Q9GZV9 251 aaPredicted RBP8.66□□□□□ -1.02
COL11A1-202ENST00000358392 USF3Q68DE3 2245 aa8.66□□□□□ -1.02
COL11A1-202ENST00000358392 TRBV7-3A0A075B6L6 115 aa8.66□□□□□ -1.02
COL11A1-202ENST00000358392 TMEM256-PLSCR3K7ERE1 68 aa8.66□□□□□ -1.02
COL11A1-202ENST00000358392 SPAG11BQ08648 103 aa8.66□□□□□ -1.02
COL11A1-202ENST00000358392 DEFB135Q30KP9 77 aa8.65□□□□□ -1.02
COL11A1-202ENST00000358392 PLXNA3P51805 1871 aa8.65□□□□□ -1.02
COL11A1-202ENST00000358392 MRPL55Q7Z7F7 128 aaKnown RBP8.65□□□□□ -1.02
COL11A1-202ENST00000358392 WFDC10BQ8IUB3 73 aa8.65□□□□□ -1.02
COL11A1-202ENST00000358392 CTSGP08311 255 aa8.65□□□□□ -1.03
COL11A1-202ENST00000358392 JMJD7-PLA2G4BH0Y9G9 81 aa8.64□□□□□ -1.03
COL11A1-202ENST00000358392 C3orf22Q8N5N4 141 aa8.64□□□□□ -1.03
COL11A1-202ENST00000358392 PCNX2A6NKB5 2137 aa8.64□□□□□ -1.03
COL11A1-202ENST00000358392 TCL1BO95988 128 aa8.64□□□□□ -1.03
COL11A1-202ENST00000358392 NDUFV3P56181 108 aaKnown RBP8.64□□□□□ -1.03
COL11A1-202ENST00000358392 RSPO1Q2MKA7 263 aaPredicted RBP8.64□□□□□ -1.03
COL11A1-202ENST00000358392 NRGNQ92686 78 aa8.64□□□□□ -1.03
COL11A1-202ENST00000358392 C11orf86A6NJI1 115 aa8.64□□□□□ -1.03
COL11A1-202ENST00000358392 H3BUA1 57 aa8.63□□□□□ -1.03
COL11A1-202ENST00000358392 SLPIP03973 132 aa8.63□□□□□ -1.03
COL11A1-202ENST00000358392 ZSWIM8A7E2V4 1837 aa8.63□□□□□ -1.03
COL11A1-202ENST00000358392 P0DMU3 169 aa8.63□□□□□ -1.03
COL11A1-202ENST00000358392 FAM231AP0DMU4 169 aa8.63□□□□□ -1.03
COL11A1-202ENST00000358392 FAM231CP0DMU5 169 aa8.63□□□□□ -1.03
COL11A1-202ENST00000358392 DENND4AQ7Z401 1863 aa8.63□□□□□ -1.03
COL11A1-202ENST00000358392 IGHV4-30-2A0A087WSY4 118 aa8.63□□□□□ -1.03
COL11A1-202ENST00000358392 TMEM263Q8WUH6 116 aaKnown RBP8.63□□□□□ -1.03
COL11A1-202ENST00000358392 I3L2K1 104 aa8.62□□□□□ -1.03
COL11A1-202ENST00000358392 COX7BP24311 80 aa8.62□□□□□ -1.03
COL11A1-202ENST00000358392 Q6ZUT4 128 aa8.62□□□□□ -1.03
COL11A1-202ENST00000358392 C20orf197Q8N268 126 aa8.62□□□□□ -1.03
COL11A1-202ENST00000358392 B9D2Q9BPU9 175 aa8.62□□□□□ -1.03
COL11A1-202ENST00000358392 IGHV7-81A0A0B4J1V7 117 aa8.62□□□□□ -1.03
COL11A1-202ENST00000358392 RNF152Q8N8N0 203 aa8.62□□□□□ -1.03
COL11A1-202ENST00000358392 TANC2Q9HCD6 1990 aa8.62□□□□□ -1.03
COL11A1-202ENST00000358392 CENPVL3A0A0U1RRI6 287 aa8.62□□□□□ -1.03
COL11A1-202ENST00000358392 BPY2O14599 106 aa8.62□□□□□ -1.03
COL11A1-202ENST00000358392 IGLV1-44P01699 117 aa8.62□□□□□ -1.03
COL11A1-202ENST00000358392 SIRPDQ9H106 197 aa8.62□□□□□ -1.03
COL11A1-202ENST00000358392 FRMD6-AS1P0C7T7 363 aa8.62□□□□□ -1.03
COL11A1-202ENST00000358392 E9PLD3 99 aa8.62□□□□□ -1.03
COL11A1-202ENST00000358392 C16orf54Q6UWD8 224 aa8.62□□□□□ -1.03
COL11A1-202ENST00000358392 MDFICQ9P1T7 246 aa8.62□□□□□ -1.03
COL11A1-202ENST00000358392 USP17L23D6RBM5 183 aa8.61□□□□□ -1.03
COL11A1-202ENST00000358392 H3BQ85 93 aa8.61□□□□□ -1.03
COL11A1-202ENST00000358392 HIGD2AQ9BW72 106 aa8.61□□□□□ -1.03
COL11A1-202ENST00000358392 PLCE1Q9P212 2302 aa8.61□□□□□ -1.03
COL11A1-202ENST00000358392 J3QKU1 62 aa8.61□□□□□ -1.03
COL11A1-202ENST00000358392 PKDREJQ9NTG1 2253 aa8.61□□□□□ -1.03
COL11A1-202ENST00000358392 LOXL1Q08397 574 aaPredicted RBP8.61□□□□□ -1.03
COL11A1-202ENST00000358392 EP300Q09472 2414 aaPredicted RBP8.61□□□□□ -1.03
COL11A1-202ENST00000358392 TEX49A0A1B0GTD5 131 aa8.61□□□□□ -1.03
COL11A1-202ENST00000358392 K7EIM0 57 aa8.61□□□□□ -1.03
COL11A1-202ENST00000358392 MT-ATP8P03928 68 aa8.61□□□□□ -1.03
COL11A1-202ENST00000358392 ENHOQ6UWT2 76 aa8.61□□□□□ -1.03
COL11A1-202ENST00000358392 CACNA1BQ00975 2339 aa8.61□□□□□ -1.03
COL11A1-202ENST00000358392 PATE2Q6UY27 113 aa8.6□□□□□ -1.03
COL11A1-202ENST00000358392 FAM215AQ9Y5M1 114 aa8.6□□□□□ -1.03
COL11A1-202ENST00000358392 SIP14410 1827 aa8.6□□□□□ -1.03
COL11A1-202ENST00000358392 KIAA1671Q9BY89 1806 aa8.6□□□□□ -1.03
COL11A1-202ENST00000358392 IGHV4-61A0A0C4DH41 118 aa8.6□□□□□ -1.03
COL11A1-202ENST00000358392 IGKV1-17P01599 117 aa8.6□□□□□ -1.03
COL11A1-202ENST00000358392 PLXNA4Q9HCM2 1894 aa8.6□□□□□ -1.03
COL11A1-202ENST00000358392 GPHB5Q86YW7 130 aa8.59□□□□□ -1.03
COL11A1-202ENST00000358392 LENEPQ9Y5L5 61 aa8.59□□□□□ -1.03
COL11A1-202ENST00000358392 IGHV1-58A0A0C4DH39 117 aa8.59□□□□□ -1.03
COL11A1-202ENST00000358392 IGLC6P0CF74 106 aa8.59□□□□□ -1.03
COL11A1-202ENST00000358392 FAM236DA0A1B0GTK5 79 aa8.59□□□□□ -1.03
COL11A1-202ENST00000358392 FAM236CP0DP71 79 aa8.59□□□□□ -1.03
COL11A1-202ENST00000358392 NOTCH3Q9UM47 2321 aa8.59□□□□□ -1.03
COL11A1-202ENST00000358392 TRIOBPQ9H2D6 2365 aa8.59□□□□□ -1.03
COL11A1-202ENST00000358392 C2orf70A6NJV1 201 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms