RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 SMIM27A0A1W2PRY6 76 aa10.51□□□□□ -0.73
CCNE1-202ENST00000357943 F2Z2F3 143 aa10.51□□□□□ -0.73
CCNE1-202ENST00000357943 NXPH4O95158 308 aa10.51□□□□□ -0.73
CCNE1-202ENST00000357943 SYT8Q8NBV8 401 aa10.51□□□□□ -0.73
CCNE1-202ENST00000357943 TRAV9-1A0A075B6T8 112 aa10.5□□□□□ -0.73
CCNE1-202ENST00000357943 FAM231BA6NCW3 169 aa10.5□□□□□ -0.73
CCNE1-202ENST00000357943 HTN3P15516 51 aa10.5□□□□□ -0.73
CCNE1-202ENST00000357943 PIK3CD-AS1Q5SR53 167 aa10.5□□□□□ -0.73
CCNE1-202ENST00000357943 NUP35Q8NFH5 326 aa10.5□□□□□ -0.73
CCNE1-202ENST00000357943 ZNF479Q96JC4 524 aa10.5□□□□□ -0.73
CCNE1-202ENST00000357943 NDUFAF3Q9BU61 184 aa10.5□□□□□ -0.73
CCNE1-202ENST00000357943 MSRB1Q9NZV6 116 aa10.5□□□□□ -0.73
CCNE1-202ENST00000357943 ATP5G1P05496 136 aa10.49□□□□□ -0.73
CCNE1-202ENST00000357943 NTF3P20783 257 aa10.49□□□□□ -0.73
CCNE1-202ENST00000357943 CFAP126Q5VTH2 177 aa10.49□□□□□ -0.73
CCNE1-202ENST00000357943 PHLDA1Q8WV24 401 aaPredicted RBP10.49□□□□□ -0.73
CCNE1-202ENST00000357943 BTF3L4Q96K17 158 aa10.49□□□□□ -0.73
CCNE1-202ENST00000357943 CNFNQ9BYD5 112 aa10.49□□□□□ -0.73
CCNE1-202ENST00000357943 SAMD10Q9BYL1 202 aa10.49□□□□□ -0.73
CCNE1-202ENST00000357943 LYSTQ99698 3801 aa10.49□□□□□ -0.73
CCNE1-202ENST00000357943 IGHV4-4A0A075B6R2 117 aa10.48□□□□□ -0.73
CCNE1-202ENST00000357943 DEFB131BA0A096LNP1 70 aa10.48□□□□□ -0.73
CCNE1-202ENST00000357943 TRAV4A0A0B4J268 109 aa10.48□□□□□ -0.73
CCNE1-202ENST00000357943 RS1O15537 224 aa10.48□□□□□ -0.73
CCNE1-202ENST00000357943 HOXA5P20719 270 aa10.48□□□□□ -0.73
CCNE1-202ENST00000357943 OR4C5Q8NGB2 326 aa10.48□□□□□ -0.73
CCNE1-202ENST00000357943 MUC7Q8TAX7 377 aa10.48□□□□□ -0.73
CCNE1-202ENST00000357943 NAT8BQ9UHF3 227 aa10.48□□□□□ -0.73
CCNE1-202ENST00000357943 IGHV3-73A0A0B4J1V6 119 aa10.47□□□□□ -0.73
CCNE1-202ENST00000357943 TRAV10A0A0B4J240 114 aa10.47□□□□□ -0.73
CCNE1-202ENST00000357943 RPS10P46783 165 aaKnown RBP10.47□□□□□ -0.73
CCNE1-202ENST00000357943 CACNG7P62955 275 aa10.47□□□□□ -0.73
CCNE1-202ENST00000357943 FABP9Q0Z7S8 132 aa10.47□□□□□ -0.73
CCNE1-202ENST00000357943 A0A087WWL8 130 aa10.47□□□□□ -0.73
CCNE1-202ENST00000357943 A8MWV9 139 aa10.47□□□□□ -0.73
CCNE1-202ENST00000357943 F5H768 121 aa10.47□□□□□ -0.73
CCNE1-202ENST00000357943 TWIST1Q15672 202 aa10.47□□□□□ -0.73
CCNE1-202ENST00000357943 CRYGDP07320 174 aa10.46□□□□□ -0.74
CCNE1-202ENST00000357943 FHL2Q14192 279 aa10.46□□□□□ -0.74
CCNE1-202ENST00000357943 FAM74A4Q5TZK3 123 aa10.46□□□□□ -0.74
CCNE1-202ENST00000357943 ZFAND6Q6FIF0 208 aa10.46□□□□□ -0.74
CCNE1-202ENST00000357943 WDR73Q6P4I2 378 aa10.46□□□□□ -0.74
CCNE1-202ENST00000357943 A0A1B0GUT8 65 aa10.45□□□□□ -0.74
CCNE1-202ENST00000357943 UFSP1Q6NVU6 142 aa10.45□□□□□ -0.74
CCNE1-202ENST00000357943 C14orf178Q8N769 122 aaPredicted RBP10.45□□□□□ -0.74
CCNE1-202ENST00000357943 NIT2Q9NQR4 276 aa10.45□□□□□ -0.74
CCNE1-202ENST00000357943 EVI2AP22794 236 aa10.44□□□□□ -0.74
CCNE1-202ENST00000357943 BORCS7Q96B45 105 aa10.44□□□□□ -0.74
CCNE1-202ENST00000357943 AP1S3Q96PC3 154 aa10.44□□□□□ -0.74
CCNE1-202ENST00000357943 NACAE9PAV3 2078 aa10.44□□□□□ -0.74
CCNE1-202ENST00000357943 TRGV4A0A0C4DH28 118 aa10.44□□□□□ -0.74
CCNE1-202ENST00000357943 S100A2P29034 98 aa10.44□□□□□ -0.74
CCNE1-202ENST00000357943 CEMP1Q6PRD7 247 aaPredicted RBP10.44□□□□□ -0.74
CCNE1-202ENST00000357943 ZFP2Q6ZN57 461 aa10.44□□□□□ -0.74
CCNE1-202ENST00000357943 KIF25-AS1Q9Y6Z4 181 aa10.44□□□□□ -0.74
CCNE1-202ENST00000357943 TRGC2P03986 189 aa10.43□□□□□ -0.74
CCNE1-202ENST00000357943 TRGC1P0CF51 173 aa10.43□□□□□ -0.74
CCNE1-202ENST00000357943 Q6ZSN1 163 aa10.43□□□□□ -0.74
CCNE1-202ENST00000357943 HHLA3Q9XRX5 114 aa10.43□□□□□ -0.74
CCNE1-202ENST00000357943 TRAV26-1A0A087WT03 109 aa10.42□□□□□ -0.74
CCNE1-202ENST00000357943 A0A0J9YY99 117 aa10.42□□□□□ -0.74
CCNE1-202ENST00000357943 NUPR2A6NF83 97 aa10.42□□□□□ -0.74
CCNE1-202ENST00000357943 IGLL5B9A064 214 aa10.42□□□□□ -0.74
CCNE1-202ENST00000357943 PHOX2AO14813 284 aa10.42□□□□□ -0.74
CCNE1-202ENST00000357943 CIDEAO60543 219 aa10.42□□□□□ -0.74
CCNE1-202ENST00000357943 GATA1P15976 413 aaPredicted RBP10.42□□□□□ -0.74
CCNE1-202ENST00000357943 LINC00315P59091 139 aa10.42□□□□□ -0.74
CCNE1-202ENST00000357943 MRPL54Q6P161 138 aaKnown RBP10.42□□□□□ -0.74
CCNE1-202ENST00000357943 RHODO00212 210 aa10.41□□□□□ -0.74
CCNE1-202ENST00000357943 SMIM17P0DL12 118 aa10.41□□□□□ -0.74
CCNE1-202ENST00000357943 CRYBA4P53673 196 aa10.41□□□□□ -0.74
CCNE1-202ENST00000357943 RIGQ13278 110 aa10.41□□□□□ -0.74
CCNE1-202ENST00000357943 VSIG2Q96IQ7 327 aa10.41□□□□□ -0.74
CCNE1-202ENST00000357943 PRO0255Q9UI72 69 aa10.41□□□□□ -0.74
CCNE1-202ENST00000357943 CAMPP49913 170 aa10.4□□□□□ -0.74
CCNE1-202ENST00000357943 COX19Q49B96 90 aa10.4□□□□□ -0.74
CCNE1-202ENST00000357943 RASL11AQ6T310 242 aa10.4□□□□□ -0.74
CCNE1-202ENST00000357943 ATP5L2Q7Z4Y8 100 aa10.4□□□□□ -0.74
CCNE1-202ENST00000357943 SLC25A29Q8N8R3 303 aa10.4□□□□□ -0.74
CCNE1-202ENST00000357943 A0A1B0GXF2 115 aa10.4□□□□□ -0.75
CCNE1-202ENST00000357943 SLAQ13239 276 aa10.4□□□□□ -0.75
CCNE1-202ENST00000357943 ZNF56Q15929 161 aa10.4□□□□□ -0.75
CCNE1-202ENST00000357943 CASC10Q5T4H9 136 aa10.4□□□□□ -0.75
CCNE1-202ENST00000357943 GNB1LQ9BYB4 327 aa10.4□□□□□ -0.75
CCNE1-202ENST00000357943 DPH3P1Q9H4G8 78 aa10.4□□□□□ -0.75
CCNE1-202ENST00000357943 TRAPPC1Q9Y5R8 145 aa10.4□□□□□ -0.75
CCNE1-202ENST00000357943 C3orf84H3BNL1 204 aa10.39□□□□□ -0.75
CCNE1-202ENST00000357943 PAX4O43316 350 aa10.39□□□□□ -0.75
CCNE1-202ENST00000357943 MGPP08493 103 aa10.39□□□□□ -0.75
CCNE1-202ENST00000357943 TMEM136Q6ZRR5 245 aa10.39□□□□□ -0.75
CCNE1-202ENST00000357943 SMIM15Q7Z3B0 74 aa10.39□□□□□ -0.75
CCNE1-202ENST00000357943 Q9UF83 564 aa10.39□□□□□ -0.75
CCNE1-202ENST00000357943 KLK5Q9Y337 293 aaPredicted RBP10.39□□□□□ -0.75
CCNE1-202ENST00000357943 LOC100131303A0A0U1RQF7 123 aa10.38□□□□□ -0.75
CCNE1-202ENST00000357943 TRBV6-4A0A1B0GX49 114 aa10.38□□□□□ -0.75
CCNE1-202ENST00000357943 F5H697 171 aa10.38□□□□□ -0.75
CCNE1-202ENST00000357943 HBBP68871 147 aa10.38□□□□□ -0.75
CCNE1-202ENST00000357943 FRZBQ92765 325 aa10.38□□□□□ -0.75
CCNE1-202ENST00000357943 TMEM191AQ9H0A3 160 aa10.38□□□□□ -0.75
CCNE1-202ENST00000357943 P0DMU3 169 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms