RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 BEX4Q9NWD9 120 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-205ENST00000357568 USP9XQ93008 2570 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-205ENST00000357568 RELNP78509 3460 aa8.06□□□□□ -1.12
CAPN3-205ENST00000357568 A0A0J9YX75 114 aa8.06□□□□□ -1.12
CAPN3-205ENST00000357568 SLC25A20O43772 301 aa8.06□□□□□ -1.12
CAPN3-205ENST00000357568 PRB3Q04118 309 aaPredicted RBP8.06□□□□□ -1.12
CAPN3-205ENST00000357568 GPHB5Q86YW7 130 aa8.06□□□□□ -1.12
CAPN3-205ENST00000357568 EEF1AKMT3Q96AZ1 226 aa8.06□□□□□ -1.12
CAPN3-205ENST00000357568 CCL19Q99731 98 aa8.06□□□□□ -1.12
CAPN3-205ENST00000357568 C15orf32Q32M92 178 aa8.05□□□□□ -1.12
CAPN3-205ENST00000357568 AMELXQ99217 191 aa8.05□□□□□ -1.12
CAPN3-205ENST00000357568 ICE1Q9Y2F5 2266 aa8.05□□□□□ -1.12
CAPN3-205ENST00000357568 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.05□□□□□ -1.12
CAPN3-205ENST00000357568 LRRC75A-AS1Q8N1F1 130 aa8.05□□□□□ -1.12
CAPN3-205ENST00000357568 ZFAND2AQ8N6M9 145 aa8.05□□□□□ -1.12
CAPN3-205ENST00000357568 Q8N9W7 124 aa8.05□□□□□ -1.12
CAPN3-205ENST00000357568 AJUBAQ96IF1 538 aa8.05□□□□□ -1.12
CAPN3-205ENST00000357568 FAM19A4Q96LR4 140 aa8.05□□□□□ -1.12
CAPN3-205ENST00000357568 KLK15Q9H2R5 256 aa8.05□□□□□ -1.12
CAPN3-205ENST00000357568 TENM4Q6N022 2769 aa8.04□□□□□ -1.12
CAPN3-205ENST00000357568 SPTBN1Q01082 2364 aaKnown RBP8.04□□□□□ -1.12
CAPN3-205ENST00000357568 GAGE2BQ13066 116 aa8.04□□□□□ -1.12
CAPN3-205ENST00000357568 GAGE2EQ4V326 116 aa8.04□□□□□ -1.12
CAPN3-205ENST00000357568 VMO1Q7Z5L0 202 aa8.04□□□□□ -1.12
CAPN3-205ENST00000357568 RPL39LQ96EH5 51 aaKnown RBP8.04□□□□□ -1.12
CAPN3-205ENST00000357568 GAGE2DQ9UEU5 116 aa8.04□□□□□ -1.12
CAPN3-205ENST00000357568 PHLDA3Q9Y5J5 127 aa8.04□□□□□ -1.12
CAPN3-205ENST00000357568 SNCGO76070 127 aa8.04□□□□□ -1.12
CAPN3-205ENST00000357568 TSHBP01222 138 aa8.04□□□□□ -1.12
CAPN3-205ENST00000357568 IGHV3-33P01772 117 aa8.04□□□□□ -1.12
CAPN3-205ENST00000357568 ZNF876PQ49A33 203 aa8.04□□□□□ -1.12
CAPN3-205ENST00000357568 CCDC140Q96MF4 163 aa8.04□□□□□ -1.12
CAPN3-205ENST00000357568 ANKHD1Q8IWZ3 2542 aaKnown RBP8.03□□□□□ -1.12
CAPN3-205ENST00000357568 TRBV6-5A0A0K0K1A5 114 aa8.03□□□□□ -1.12
CAPN3-205ENST00000357568 IGHV1-69P01742 117 aa8.03□□□□□ -1.12
CAPN3-205ENST00000357568 NHLRC4P0CG21 123 aaPredicted RBP8.03□□□□□ -1.12
CAPN3-205ENST00000357568 POLR2KP53803 58 aaKnown RBP8.03□□□□□ -1.12
CAPN3-205ENST00000357568 KRTAP10-9P60411 292 aa8.03□□□□□ -1.12
CAPN3-205ENST00000357568 ATXN8Q156A1 80 aa8.03□□□□□ -1.12
CAPN3-205ENST00000357568 ANXA2RQ3ZCQ2 193 aa8.03□□□□□ -1.12
CAPN3-205ENST00000357568 PRR9Q5T870 116 aa8.03□□□□□ -1.12
CAPN3-205ENST00000357568 TMEM263Q8WUH6 116 aaKnown RBP8.03□□□□□ -1.12
CAPN3-205ENST00000357568 DOPEY2Q9Y3R5 2298 aa8.03□□□□□ -1.12
CAPN3-205ENST00000357568 VCYO14598 125 aa8.03□□□□□ -1.12
CAPN3-205ENST00000357568 LEPROTO15243 131 aa8.03□□□□□ -1.12
CAPN3-205ENST00000357568 DUSP14O95147 198 aaKnown RBP8.03□□□□□ -1.12
CAPN3-205ENST00000357568 S100A4P26447 101 aaKnown RBP8.03□□□□□ -1.12
CAPN3-205ENST00000357568 NDUFV3P56181 108 aaKnown RBP8.03□□□□□ -1.12
CAPN3-205ENST00000357568 KLHL30-AS1Q8NEE0 82 aa8.03□□□□□ -1.12
CAPN3-205ENST00000357568 KIF25-AS1Q9Y6Z4 181 aa8.03□□□□□ -1.12
CAPN3-205ENST00000357568 GAGE12JA6NER3 117 aa8.02□□□□□ -1.13
CAPN3-205ENST00000357568 J3QQQ9 107 aa8.02□□□□□ -1.13
CAPN3-205ENST00000357568 GAGE7O76087 117 aa8.02□□□□□ -1.13
CAPN3-205ENST00000357568 ABCA1O95477 2261 aa8.02□□□□□ -1.13
CAPN3-205ENST00000357568 GAGE12FP0CL80 117 aa8.02□□□□□ -1.13
CAPN3-205ENST00000357568 GAGE12GP0CL81 117 aa8.02□□□□□ -1.13
CAPN3-205ENST00000357568 GAGE12IP0CL82 117 aa8.02□□□□□ -1.13
CAPN3-205ENST00000357568 GAGE4Q13068 117 aa8.02□□□□□ -1.13
CAPN3-205ENST00000357568 OR10J6PQ8NGY7 276 aa8.02□□□□□ -1.13
CAPN3-205ENST00000357568 C16orf92Q96LL3 132 aa8.02□□□□□ -1.13
CAPN3-205ENST00000357568 FLNCQ14315 2725 aa8.02□□□□□ -1.13
CAPN3-205ENST00000357568 SDHAF1A6NFY7 115 aa8.02□□□□□ -1.13
CAPN3-205ENST00000357568 LGALS3P17931 250 aaKnown RBP8.02□□□□□ -1.13
CAPN3-205ENST00000357568 C14orf178Q8N769 122 aaPredicted RBP8.02□□□□□ -1.13
CAPN3-205ENST00000357568 TP53TG1Q9Y2A0 90 aa8.02□□□□□ -1.13
CAPN3-205ENST00000357568 IFITM1P13164 125 aa8.01□□□□□ -1.13
CAPN3-205ENST00000357568 LINC00315P59091 139 aa8.01□□□□□ -1.13
CAPN3-205ENST00000357568 RHOHQ15669 191 aa8.01□□□□□ -1.13
CAPN3-205ENST00000357568 DEFB113Q30KQ7 82 aa8.01□□□□□ -1.13
CAPN3-205ENST00000357568 KIR2DL4Q99706 377 aa8.01□□□□□ -1.13
CAPN3-205ENST00000357568 SPANXDQ9BXN6 97 aa8.01□□□□□ -1.13
CAPN3-205ENST00000357568 VPREB3Q9UKI3 123 aa8.01□□□□□ -1.13
CAPN3-205ENST00000357568 TRBV30A0A0K0K1B3 111 aa8.01□□□□□ -1.13
CAPN3-205ENST00000357568 TRBV10-2A0A0K0K1G8 114 aa8.01□□□□□ -1.13
CAPN3-205ENST00000357568 FAM240AA0A1B0GVK7 77 aa8.01□□□□□ -1.13
CAPN3-205ENST00000357568 C9JAW5 83 aa8.01□□□□□ -1.13
CAPN3-205ENST00000357568 LYNX1G3V0Z9 82 aa8.01□□□□□ -1.13
CAPN3-205ENST00000357568 LYNX1P0DP58 116 aa8.01□□□□□ -1.13
CAPN3-205ENST00000357568 TSPEAR-AS2P59090 65 aa8.01□□□□□ -1.13
CAPN3-205ENST00000357568 Q6ZS46 218 aa8.01□□□□□ -1.13
CAPN3-205ENST00000357568 PPDPFQ9H3Y8 114 aa8.01□□□□□ -1.13
CAPN3-205ENST00000357568 HELZ2Q9BYK8 2649 aaKnown RBP8.01□□□□□ -1.13
CAPN3-205ENST00000357568 TRBV27A0A0K0K1C4 114 aa8□□□□□ -1.13
CAPN3-205ENST00000357568 SOCS3O14543 225 aa8□□□□□ -1.13
CAPN3-205ENST00000357568 MGPP08493 103 aa8□□□□□ -1.13
CAPN3-205ENST00000357568 DSCR9P59020 149 aa8□□□□□ -1.13
CAPN3-205ENST00000357568 LINC01620Q4KN68 170 aa8□□□□□ -1.13
CAPN3-205ENST00000357568 LINC01548A6NM66 108 aa8□□□□□ -1.13
CAPN3-205ENST00000357568 CLEC19AQ6UXS0 136 aa8□□□□□ -1.13
CAPN3-205ENST00000357568 TMEM223A0PJW6 202 aa7.99□□□□□ -1.13
CAPN3-205ENST00000357568 A4D1N5 150 aa7.99□□□□□ -1.13
CAPN3-205ENST00000357568 FAM223BA6NKX1 122 aa7.99□□□□□ -1.13
CAPN3-205ENST00000357568 RNASE3P12724 160 aaKnown RBP7.99□□□□□ -1.13
CAPN3-205ENST00000357568 CRIP2P52943 208 aaPredicted RBP7.99□□□□□ -1.13
CAPN3-205ENST00000357568 NSUN5P1Q3KNT7 163 aa7.99□□□□□ -1.13
CAPN3-205ENST00000357568 TTC32Q5I0X7 151 aa7.99□□□□□ -1.13
CAPN3-205ENST00000357568 FAM223AQ8IWN6 122 aa7.99□□□□□ -1.13
CAPN3-205ENST00000357568 Q8N1Y9 231 aa7.99□□□□□ -1.13
CAPN3-205ENST00000357568 NRGNQ92686 78 aa7.99□□□□□ -1.13
CAPN3-205ENST00000357568 H3BT86 120 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms