RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 UBE2D3P61077 147 aa3.65□□□□□ -1.82
SYNE2-203ENST00000357395 IGHV1OR15-9A0A0B4J2B8 117 aa3.65□□□□□ -1.82
SYNE2-203ENST00000357395 Q6ZRM9 215 aa3.65□□□□□ -1.82
SYNE2-203ENST00000357395 LINC01561Q8N1V8 128 aa3.65□□□□□ -1.82
SYNE2-203ENST00000357395 CTSGP08311 255 aa3.65□□□□□ -1.82
SYNE2-203ENST00000357395 APELAP0DMC3 54 aa3.65□□□□□ -1.82
SYNE2-203ENST00000357395 CLEC19AQ6UXS0 136 aa3.65□□□□□ -1.82
SYNE2-203ENST00000357395 EBI3Q14213 229 aa3.65□□□□□ -1.83
SYNE2-203ENST00000357395 WFDC12Q8WWY7 111 aa3.65□□□□□ -1.83
SYNE2-203ENST00000357395 TRPM7Q96QT4 1865 aa3.65□□□□□ -1.83
SYNE2-203ENST00000357395 MUC6Q6W4X9 2439 aa3.65□□□□□ -1.83
SYNE2-203ENST00000357395 PLXNA4Q9HCM2 1894 aa3.65□□□□□ -1.83
SYNE2-203ENST00000357395 TEX22C9J3V5 150 aa3.65□□□□□ -1.83
SYNE2-203ENST00000357395 APOC4P55056 127 aa3.65□□□□□ -1.83
SYNE2-203ENST00000357395 RNASE6Q93091 150 aaKnown RBP3.65□□□□□ -1.83
SYNE2-203ENST00000357395 RLFQ13129 1914 aa3.65□□□□□ -1.83
SYNE2-203ENST00000357395 IGKV1D-43A0A0B4J1Z2 117 aa3.65□□□□□ -1.83
SYNE2-203ENST00000357395 C8orf49Q96NF6 230 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 CD177Q8N6Q3 437 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 NEXN-AS1Q8NBZ9 246 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 TRBV6-5A0A0K0K1A5 114 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 TP53AIP1Q9HCN2 124 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 SIGLEC1Q9BZZ2 1709 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 IGKV1-12A0A0C4DH73 117 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 NUPR1O60356 82 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 IGKV1D-12P01611 117 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 TMEM178BH3BS89 294 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 MBD6Q96DN6 1003 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 IGKV2D-26A0A0A0MRZ7 120 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 CLEC2BQ92478 149 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 TEX49A0A1B0GTD5 131 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 SIP14410 1827 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 IGHV3-48P01763 117 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 EXOC3-AS1Q8N2X6 119 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 Q8N976 141 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 IGHV3-72A0A0B4J1Y9 119 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 DSCAMO60469 2012 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 KLK9Q9UKQ9 250 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 CRYGDP07320 174 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 IGHV3-30P01768 117 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 IGHV3-30-5P0DP03 117 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 CYYR1Q96J86 154 aa3.64□□□□□ -1.83
SYNE2-203ENST00000357395 IGKV2-40A0A087WW87 121 aaPredicted RBP3.64□□□□□ -1.83
SYNE2-203ENST00000357395 IGKV2D-40P01614 121 aaPredicted RBP3.64□□□□□ -1.83
SYNE2-203ENST00000357395 A0A0J9YY99 117 aa3.63□□□□□ -1.83
SYNE2-203ENST00000357395 KIAA1671Q9BY89 1806 aa3.63□□□□□ -1.83
SYNE2-203ENST00000357395 C2orf16Q68DN1 1984 aa3.63□□□□□ -1.83
SYNE2-203ENST00000357395 RPL37AP8A6NKH3 93 aa3.63□□□□□ -1.83
SYNE2-203ENST00000357395 XGP55808 180 aa3.63□□□□□ -1.83
SYNE2-203ENST00000357395 A0A087WV48 116 aa3.63□□□□□ -1.83
SYNE2-203ENST00000357395 HCG22E2RYF7 251 aa3.63□□□□□ -1.83
SYNE2-203ENST00000357395 IGHV3-30-3P0DP02 117 aa3.63□□□□□ -1.83
SYNE2-203ENST00000357395 UBE2E1P51965 193 aa3.63□□□□□ -1.83
SYNE2-203ENST00000357395 DEFB114Q30KQ6 69 aa3.63□□□□□ -1.83
SYNE2-203ENST00000357395 C4orf51C9J302 202 aa3.63□□□□□ -1.83
SYNE2-203ENST00000357395 GNLYP22749 145 aa3.63□□□□□ -1.83
SYNE2-203ENST00000357395 ELOF1P60002 83 aaKnown RBP3.63□□□□□ -1.83
SYNE2-203ENST00000357395 TANC1Q9C0D5 1861 aa3.63□□□□□ -1.83
SYNE2-203ENST00000357395 HOXB4P17483 251 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-203ENST00000357395 ETDCA0A1B0GVM5 59 aa3.63□□□□□ -1.83
SYNE2-203ENST00000357395 TRBV7-6A0A0J9YX20 115 aa3.63□□□□□ -1.83
SYNE2-203ENST00000357395 TMEM223A0PJW6 202 aa3.63□□□□□ -1.83
SYNE2-203ENST00000357395 LYPD6Q86Y78 171 aa3.63□□□□□ -1.83
SYNE2-203ENST00000357395 IGHV4OR15-8A0A075B7B6 117 aa3.63□□□□□ -1.83
SYNE2-203ENST00000357395 A0A087WW49 117 aa3.63□□□□□ -1.83
SYNE2-203ENST00000357395 LINC00473A8K010 186 aa3.63□□□□□ -1.83
SYNE2-203ENST00000357395 ITGBL1O95965 494 aaPredicted RBP3.63□□□□□ -1.83
SYNE2-203ENST00000357395 LINC01546A6NGU7 62 aa3.62□□□□□ -1.83
SYNE2-203ENST00000357395 TRIP6Q15654 476 aaKnown RBP3.62□□□□□ -1.83
SYNE2-203ENST00000357395 CELA1Q9UNI1 258 aa3.62□□□□□ -1.83
SYNE2-203ENST00000357395 C15orf65H3BRN8 121 aa3.62□□□□□ -1.83
SYNE2-203ENST00000357395 Q8N9L7 120 aa3.62□□□□□ -1.83
SYNE2-203ENST00000357395 C11orf1Q9H5F2 150 aa3.62□□□□□ -1.83
SYNE2-203ENST00000357395 MSRB2Q9Y3D2 182 aa3.62□□□□□ -1.83
SYNE2-203ENST00000357395 CCKP06307 115 aa3.62□□□□□ -1.83
SYNE2-203ENST00000357395 FGF23Q9GZV9 251 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-203ENST00000357395 PLXNB2O15031 1838 aa3.62□□□□□ -1.83
SYNE2-203ENST00000357395 PLA2G2EQ9NZK7 142 aa3.62□□□□□ -1.83
SYNE2-203ENST00000357395 TMEM131Q92545 1883 aa3.62□□□□□ -1.83
SYNE2-203ENST00000357395 SPRY2O43597 315 aa3.62□□□□□ -1.83
SYNE2-203ENST00000357395 ADAMTSL1Q8N6G6 1762 aa3.62□□□□□ -1.83
SYNE2-203ENST00000357395 FRMPD3Q5JV73 1810 aa3.62□□□□□ -1.83
SYNE2-203ENST00000357395 IGHV1-2P23083 117 aa3.62□□□□□ -1.83
SYNE2-203ENST00000357395 C2orf91Q6ZV80 131 aa3.62□□□□□ -1.83
SYNE2-203ENST00000357395 CFHR3Q02985 330 aa3.62□□□□□ -1.83
SYNE2-203ENST00000357395 OXLD1Q5BKU9 147 aa3.62□□□□□ -1.83
SYNE2-203ENST00000357395 PRYO14603 147 aa3.62□□□□□ -1.83
SYNE2-203ENST00000357395 IGLV1-44P01699 117 aa3.62□□□□□ -1.83
SYNE2-203ENST00000357395 C20orf203Q8NBC4 194 aa3.62□□□□□ -1.83
SYNE2-203ENST00000357395 ZNF503Q96F45 646 aa3.62□□□□□ -1.83
SYNE2-203ENST00000357395 ZNF706Q9Y5V0 76 aaPredicted RBP3.62□□□□□ -1.83
SYNE2-203ENST00000357395 IGKV1-27A0A075B6S5 117 aa3.61□□□□□ -1.83
SYNE2-203ENST00000357395 COX7B2Q8TF08 81 aa3.61□□□□□ -1.83
SYNE2-203ENST00000357395 DEFB109BQ30KR1 87 aa3.61□□□□□ -1.83
SYNE2-203ENST00000357395 GATA1P15976 413 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-203ENST00000357395 LOXP28300 417 aaPredicted RBP3.61□□□□□ -1.83
SYNE2-203ENST00000357395 PSPNO60542 156 aa3.61□□□□□ -1.83
SYNE2-203ENST00000357395 P0C879 139 aa3.61□□□□□ -1.83
SYNE2-203ENST00000357395 SAP25Q8TEE9 199 aa3.61□□□□□ -1.83
SYNE2-203ENST00000357395 FAM167A-AS1Q96KT0 104 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms