RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 K7ERJ3 54 aa5.17□□□□□ -1.58
VPS13B-202ENST00000357162 IGHV7-4-1A0A0J9YVY3 117 aa5.17□□□□□ -1.58
VPS13B-202ENST00000357162 CRYGCP07315 174 aa5.17□□□□□ -1.58
VPS13B-202ENST00000357162 U3KQK5 164 aa5.17□□□□□ -1.58
VPS13B-202ENST00000357162 HIST2H2BCQ6DN03 193 aa5.17□□□□□ -1.58
VPS13B-202ENST00000357162 HIST2H2BDQ6DRA6 164 aa5.17□□□□□ -1.58
VPS13B-202ENST00000357162 HAMPP81172 84 aa5.17□□□□□ -1.58
VPS13B-202ENST00000357162 FAM27E3Q08E93 113 aa5.17□□□□□ -1.58
VPS13B-202ENST00000357162 AMTNQ6UX39 209 aa5.17□□□□□ -1.58
VPS13B-202ENST00000357162 COL8A2P25067 703 aa5.17□□□□□ -1.58
VPS13B-202ENST00000357162 IGSF10Q6WRI0 2623 aa5.17□□□□□ -1.58
VPS13B-202ENST00000357162 PLAURQ03405 335 aa5.17□□□□□ -1.58
VPS13B-202ENST00000357162 MRPL55Q7Z7F7 128 aaKnown RBP5.17□□□□□ -1.58
VPS13B-202ENST00000357162 IGHV3-35A0A0C4DH35 117 aa5.17□□□□□ -1.58
VPS13B-202ENST00000357162 ZNF561-AS1K7EIQ3 104 aa5.17□□□□□ -1.58
VPS13B-202ENST00000357162 COX7A2LO14548 114 aa5.17□□□□□ -1.58
VPS13B-202ENST00000357162 FXYD2P54710 66 aa5.17□□□□□ -1.58
VPS13B-202ENST00000357162 MIAQ16674 131 aa5.16□□□□□ -1.58
VPS13B-202ENST00000357162 C3orf22Q8N5N4 141 aa5.16□□□□□ -1.58
VPS13B-202ENST00000357162 SUMO4Q6EEV6 95 aa5.16□□□□□ -1.58
VPS13B-202ENST00000357162 IGHV3-49A0A0A0MS15 119 aa5.16□□□□□ -1.58
VPS13B-202ENST00000357162 PIP4P2Q8N4L2 257 aa5.16□□□□□ -1.58
VPS13B-202ENST00000357162 Q9H8V8 135 aa5.16□□□□□ -1.58
VPS13B-202ENST00000357162 A0A0J9YX75 114 aa5.16□□□□□ -1.58
VPS13B-202ENST00000357162 C17orf58Q2M2W7 97 aa5.16□□□□□ -1.58
VPS13B-202ENST00000357162 C1orf43Q9BWL3 253 aa5.16□□□□□ -1.58
VPS13B-202ENST00000357162 ZNF491Q8N8L2 437 aa5.16□□□□□ -1.58
VPS13B-202ENST00000357162 DKK2Q9UBU2 259 aa5.16□□□□□ -1.58
VPS13B-202ENST00000357162 ITPR2Q14571 2701 aa5.16□□□□□ -1.58
VPS13B-202ENST00000357162 FAM120AOSQ5T036 256 aa5.16□□□□□ -1.58
VPS13B-202ENST00000357162 TRANK1O15050 2925 aa5.15□□□□□ -1.58
VPS13B-202ENST00000357162 NBL1P41271 181 aa5.15□□□□□ -1.58
VPS13B-202ENST00000357162 SERP2Q8N6R1 65 aa5.15□□□□□ -1.58
VPS13B-202ENST00000357162 MBD6Q96DN6 1003 aa5.15□□□□□ -1.58
VPS13B-202ENST00000357162 APOC4P55056 127 aa5.15□□□□□ -1.58
VPS13B-202ENST00000357162 ANXA2RQ3ZCQ2 193 aa5.15□□□□□ -1.58
VPS13B-202ENST00000357162 ARTNQ5T4W7 220 aa5.15□□□□□ -1.58
VPS13B-202ENST00000357162 NSUN5P1Q3KNT7 163 aa5.15□□□□□ -1.58
VPS13B-202ENST00000357162 TRBV7-3A0A075B6L6 115 aa5.15□□□□□ -1.58
VPS13B-202ENST00000357162 DUX4L9Q6RFH8 374 aaPredicted RBP5.15□□□□□ -1.58
VPS13B-202ENST00000357162 LINC01356Q8N9X3 169 aa5.15□□□□□ -1.58
VPS13B-202ENST00000357162 TRAV4A0A0B4J268 109 aa5.15□□□□□ -1.59
VPS13B-202ENST00000357162 PPIFP30405 207 aaKnown RBP5.15□□□□□ -1.59
VPS13B-202ENST00000357162 FAM201AQ5SY85 155 aa5.15□□□□□ -1.59
VPS13B-202ENST00000357162 CENPVL3A0A0U1RRI6 287 aa5.15□□□□□ -1.59
VPS13B-202ENST00000357162 SPRY4Q9C004 299 aa5.15□□□□□ -1.59
VPS13B-202ENST00000357162 A0A087WWL8 130 aa5.15□□□□□ -1.59
VPS13B-202ENST00000357162 PSMB8P28062 276 aa5.15□□□□□ -1.59
VPS13B-202ENST00000357162 K7EIM0 57 aa5.14□□□□□ -1.59
VPS13B-202ENST00000357162 C8orf49Q96NF6 230 aa5.14□□□□□ -1.59
VPS13B-202ENST00000357162 LOXP28300 417 aaPredicted RBP5.14□□□□□ -1.59
VPS13B-202ENST00000357162 SND1-IT1Q9HBX3 110 aa5.14□□□□□ -1.59
VPS13B-202ENST00000357162 TINCRA0A1B0GVN0 87 aa5.14□□□□□ -1.59
VPS13B-202ENST00000357162 BUB3O43684 328 aa5.14□□□□□ -1.59
VPS13B-202ENST00000357162 RSPO1Q2MKA7 263 aaPredicted RBP5.14□□□□□ -1.59
VPS13B-202ENST00000357162 C16orf74Q96GX8 76 aa5.14□□□□□ -1.59
VPS13B-202ENST00000357162 SMKR1H3BMG3 65 aa5.14□□□□□ -1.59
VPS13B-202ENST00000357162 SPAARA0A1B0GVQ0 90 aa5.13□□□□□ -1.59
VPS13B-202ENST00000357162 IGKV3-20P01619 116 aa5.13□□□□□ -1.59
VPS13B-202ENST00000357162 LY6EQ16553 131 aa5.13□□□□□ -1.59
VPS13B-202ENST00000357162 IGHV3-66A0A0C4DH42 116 aa5.13□□□□□ -1.59
VPS13B-202ENST00000357162 GPHB5Q86YW7 130 aa5.13□□□□□ -1.59
VPS13B-202ENST00000357162 LINC00527Q9UJ94 153 aa5.13□□□□□ -1.59
VPS13B-202ENST00000357162 UBR5O95071 2799 aaPredicted RBP5.13□□□□□ -1.59
VPS13B-202ENST00000357162 IGLV11-55A0A075B6I3 123 aa5.13□□□□□ -1.59
VPS13B-202ENST00000357162 WFDC2Q14508 124 aa5.13□□□□□ -1.59
VPS13B-202ENST00000357162 IGHV3-11P01762 117 aa5.13□□□□□ -1.59
VPS13B-202ENST00000357162 CRYGBP07316 175 aa5.13□□□□□ -1.59
VPS13B-202ENST00000357162 LY6DQ14210 128 aa5.13□□□□□ -1.59
VPS13B-202ENST00000357162 MRPL36Q9P0J6 103 aaKnown RBP5.13□□□□□ -1.59
VPS13B-202ENST00000357162 SPINK2P20155 84 aa5.13□□□□□ -1.59
VPS13B-202ENST00000357162 SS18L2Q9UHA2 77 aa5.13□□□□□ -1.59
VPS13B-202ENST00000357162 DYNAPQ8N1N2 210 aa5.13□□□□□ -1.59
VPS13B-202ENST00000357162 I3L2K1 104 aa5.12□□□□□ -1.59
VPS13B-202ENST00000357162 ATP6V0E1O15342 81 aa5.12□□□□□ -1.59
VPS13B-202ENST00000357162 SAA4P35542 130 aa5.12□□□□□ -1.59
VPS13B-202ENST00000357162 MUSTN1Q8IVN3 82 aa5.12□□□□□ -1.59
VPS13B-202ENST00000357162 LINC01560Q8TB33 94 aa5.12□□□□□ -1.59
VPS13B-202ENST00000357162 FANCD2OSQ96PS1 177 aa5.12□□□□□ -1.59
VPS13B-202ENST00000357162 MLST8Q9BVC4 326 aa5.12□□□□□ -1.59
VPS13B-202ENST00000357162 IGHV3-64A0A075B6Q5 118 aa5.12□□□□□ -1.59
VPS13B-202ENST00000357162 IGHV4-4A0A075B6R2 117 aa5.12□□□□□ -1.59
VPS13B-202ENST00000357162 IBA57-AS1B1ANH7 110 aa5.12□□□□□ -1.59
VPS13B-202ENST00000357162 MRGPRG-AS1Q2M3A8 158 aa5.12□□□□□ -1.59
VPS13B-202ENST00000357162 PYGO1Q9Y3Y4 419 aa5.12□□□□□ -1.59
VPS13B-202ENST00000357162 NREPQ16612 68 aa5.12□□□□□ -1.59
VPS13B-202ENST00000357162 CLUHP3Q96NS8 147 aa5.12□□□□□ -1.59
VPS13B-202ENST00000357162 COLQQ9Y215 455 aaPredicted RBP5.12□□□□□ -1.59
VPS13B-202ENST00000357162 FAM236DA0A1B0GTK5 79 aa5.12□□□□□ -1.59
VPS13B-202ENST00000357162 PATE3B3GLJ2 98 aa5.12□□□□□ -1.59
VPS13B-202ENST00000357162 SAP30O75446 220 aa5.12□□□□□ -1.59
VPS13B-202ENST00000357162 FAM236CP0DP71 79 aa5.12□□□□□ -1.59
VPS13B-202ENST00000357162 OVOL3O00110 214 aa5.11□□□□□ -1.59
VPS13B-202ENST00000357162 AGPAT4-IT1Q9H0P7 198 aa5.11□□□□□ -1.59
VPS13B-202ENST00000357162 METRNQ9UJH8 293 aa5.11□□□□□ -1.59
VPS13B-202ENST00000357162 MSMBP08118 114 aa5.11□□□□□ -1.59
VPS13B-202ENST00000357162 C5orf24Q7Z6I8 188 aa5.11□□□□□ -1.59
VPS13B-202ENST00000357162 K7EQD1 137 aa5.11□□□□□ -1.59
VPS13B-202ENST00000357162 WDR86Q86TI4 376 aa5.11□□□□□ -1.59
VPS13B-202ENST00000357162 S4R3C0 116 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms