RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 RNF185Q96GF1 192 aa9.7□□□□□ -0.86
BDNF-202ENST00000356660 TRBV6-1A0A0K0K1D8 114 aa9.7□□□□□ -0.86
BDNF-202ENST00000356660 CTSGP08311 255 aa9.7□□□□□ -0.86
BDNF-202ENST00000356660 IGFL2Q6UWQ7 119 aa9.7□□□□□ -0.86
BDNF-202ENST00000356660 PIP4P2Q8N4L2 257 aa9.7□□□□□ -0.86
BDNF-202ENST00000356660 TOMM7Q9P0U1 55 aa9.7□□□□□ -0.86
BDNF-202ENST00000356660 CFAP47Q6ZTR5 3102 aa9.7□□□□□ -0.86
BDNF-202ENST00000356660 XGP55808 180 aa9.69□□□□□ -0.86
BDNF-202ENST00000356660 C8orf31Q8N9H6 132 aa9.69□□□□□ -0.86
BDNF-202ENST00000356660 KAAG1Q9UBP8 84 aa9.69□□□□□ -0.86
BDNF-202ENST00000356660 UBE2L6O14933 153 aa9.69□□□□□ -0.86
BDNF-202ENST00000356660 IGLC6P0CF74 106 aa9.69□□□□□ -0.86
BDNF-202ENST00000356660 FANCD2OSQ96PS1 177 aa9.69□□□□□ -0.86
BDNF-202ENST00000356660 U3KQK5 164 aa9.69□□□□□ -0.86
BDNF-202ENST00000356660 SMIM9A6NGZ8 99 aa9.69□□□□□ -0.86
BDNF-202ENST00000356660 B4DSR2 109 aa9.69□□□□□ -0.86
BDNF-202ENST00000356660 PF4P02776 101 aa9.69□□□□□ -0.86
BDNF-202ENST00000356660 COX6CP09669 75 aa9.69□□□□□ -0.86
BDNF-202ENST00000356660 SYNJ2BPP57105 145 aa9.69□□□□□ -0.86
BDNF-202ENST00000356660 OOSP1A8MZH6 123 aa9.68□□□□□ -0.86
BDNF-202ENST00000356660 OR11H6Q8NGC7 330 aa9.68□□□□□ -0.86
BDNF-202ENST00000356660 TRAV25A0A0B4J276 109 aa9.68□□□□□ -0.86
BDNF-202ENST00000356660 RNF223E7ERA6 249 aa9.68□□□□□ -0.86
BDNF-202ENST00000356660 NDUFV3P56181 108 aaKnown RBP9.68□□□□□ -0.86
BDNF-202ENST00000356660 IGLV11-55A0A075B6I3 123 aa9.67□□□□□ -0.86
BDNF-202ENST00000356660 TRGV2A0A075B6R0 118 aa9.67□□□□□ -0.86
BDNF-202ENST00000356660 LGALS1P09382 135 aaKnown RBP9.67□□□□□ -0.86
BDNF-202ENST00000356660 HTN3P15516 51 aa9.67□□□□□ -0.86
BDNF-202ENST00000356660 ATMQ13315 3056 aa9.67□□□□□ -0.86
BDNF-202ENST00000356660 F6UB75 175 aa9.67□□□□□ -0.86
BDNF-202ENST00000356660 DUSP14O95147 198 aaKnown RBP9.67□□□□□ -0.86
BDNF-202ENST00000356660 RNASE1P07998 156 aaKnown RBP9.67□□□□□ -0.86
BDNF-202ENST00000356660 PAPPA-AS1Q5QFB9 102 aa9.67□□□□□ -0.86
BDNF-202ENST00000356660 TMEM190Q8WZ59 177 aa9.67□□□□□ -0.86
BDNF-202ENST00000356660 VPREB3Q9UKI3 123 aa9.67□□□□□ -0.86
BDNF-202ENST00000356660 CENPEQ02224 2701 aa9.67□□□□□ -0.86
BDNF-202ENST00000356660 C15orf53Q8NAA6 179 aa9.66□□□□□ -0.86
BDNF-202ENST00000356660 PRRC2AP48634 2157 aaKnown RBP9.66□□□□□ -0.86
BDNF-202ENST00000356660 GNRH2O43555 120 aa9.66□□□□□ -0.86
BDNF-202ENST00000356660 PPP1R17O96001 155 aa9.66□□□□□ -0.86
BDNF-202ENST00000356660 Q6ZQT7 251 aa9.66□□□□□ -0.86
BDNF-202ENST00000356660 PLEKHB2Q96CS7 222 aa9.66□□□□□ -0.86
BDNF-202ENST00000356660 KNCNA6PVL3 124 aa9.66□□□□□ -0.86
BDNF-202ENST00000356660 CRYGBP07316 175 aa9.66□□□□□ -0.86
BDNF-202ENST00000356660 UBE2E1P51965 193 aa9.66□□□□□ -0.86
BDNF-202ENST00000356660 LINC00477Q96M19 166 aa9.66□□□□□ -0.86
BDNF-202ENST00000356660 ADARB2-AS1A8MUL3 147 aa9.66□□□□□ -0.86
BDNF-202ENST00000356660 SLC25A20O43772 301 aa9.66□□□□□ -0.86
BDNF-202ENST00000356660 NTN5Q8WTR8 489 aaPredicted RBP9.66□□□□□ -0.86
BDNF-202ENST00000356660 UBE2E2Q96LR5 201 aa9.66□□□□□ -0.86
BDNF-202ENST00000356660 PRO1854Q9UHT4 67 aa9.66□□□□□ -0.86
BDNF-202ENST00000356660 PCSK5Q92824 1860 aa9.65□□□□□ -0.86
BDNF-202ENST00000356660 PMVKQ15126 192 aa9.65□□□□□ -0.86
BDNF-202ENST00000356660 IGHV3-53P01767 116 aa9.65□□□□□ -0.86
BDNF-202ENST00000356660 ZNF876PQ49A33 203 aa9.65□□□□□ -0.86
BDNF-202ENST00000356660 OVOL1O14753 267 aa9.65□□□□□ -0.87
BDNF-202ENST00000356660 RAI1Q7Z5J4 1906 aaPredicted RBP9.64□□□□□ -0.87
BDNF-202ENST00000356660 TRBV7-1A0A0A6YYK4 115 aa9.64□□□□□ -0.87
BDNF-202ENST00000356660 BUB3O43684 328 aa9.64□□□□□ -0.87
BDNF-202ENST00000356660 TEN1Q86WV5 123 aa9.64□□□□□ -0.87
BDNF-202ENST00000356660 DMXL2Q8TDJ6 3036 aa9.64□□□□□ -0.87
BDNF-202ENST00000356660 RPL39P62891 51 aaKnown RBP9.64□□□□□ -0.87
BDNF-202ENST00000356660 NBL1P41271 181 aa9.64□□□□□ -0.87
BDNF-202ENST00000356660 C9orf139Q6ZV77 190 aa9.64□□□□□ -0.87
BDNF-202ENST00000356660 ANKRD29Q8N6D5 301 aa9.64□□□□□ -0.87
BDNF-202ENST00000356660 NRGNQ92686 78 aa9.64□□□□□ -0.87
BDNF-202ENST00000356660 MSMBP08118 114 aa9.63□□□□□ -0.87
BDNF-202ENST00000356660 BAALCQ8WXS3 180 aa9.63□□□□□ -0.87
BDNF-202ENST00000356660 SMAD5-AS1Q9Y6J3 95 aa9.63□□□□□ -0.87
BDNF-202ENST00000356660 IGF1P05019 195 aa9.63□□□□□ -0.87
BDNF-202ENST00000356660 MRGPRG-AS1Q2M3A8 158 aa9.63□□□□□ -0.87
BDNF-202ENST00000356660 STHQ8IWL8 128 aa9.63□□□□□ -0.87
BDNF-202ENST00000356660 C11orf21Q9P2W6 132 aa9.63□□□□□ -0.87
BDNF-202ENST00000356660 V9GYY9 64 aa9.63□□□□□ -0.87
BDNF-202ENST00000356660 TRAV12-2A0A075B6T6 113 aa9.63□□□□□ -0.87
BDNF-202ENST00000356660 SPINK13Q1W4C9 94 aa9.63□□□□□ -0.87
BDNF-202ENST00000356660 NSUN5P1Q3KNT7 163 aa9.63□□□□□ -0.87
BDNF-202ENST00000356660 PRO3102Q9H379 93 aa9.63□□□□□ -0.87
BDNF-202ENST00000356660 CSDC2Q9Y534 153 aaKnown RBP9.63□□□□□ -0.87
BDNF-202ENST00000356660 C11orf86A6NJI1 115 aa9.62□□□□□ -0.87
BDNF-202ENST00000356660 C2orf82Q6UX34 121 aa9.62□□□□□ -0.87
BDNF-202ENST00000356660 SDHAF1A6NFY7 115 aa9.62□□□□□ -0.87
BDNF-202ENST00000356660 TCL1BO95988 128 aa9.62□□□□□ -0.87
BDNF-202ENST00000356660 HOXB4P17483 251 aaPredicted RBP9.62□□□□□ -0.87
BDNF-202ENST00000356660 IGHV1-69DA0A0B4J2H0 117 aa9.62□□□□□ -0.87
BDNF-202ENST00000356660 J3QQQ9 107 aa9.62□□□□□ -0.87
BDNF-202ENST00000356660 VCYO14598 125 aa9.62□□□□□ -0.87
BDNF-202ENST00000356660 IGHV1-69P01742 117 aa9.62□□□□□ -0.87
BDNF-202ENST00000356660 TRPT1Q86TN4 253 aaKnown RBP9.62□□□□□ -0.87
BDNF-202ENST00000356660 TMEM101Q96IK0 257 aa9.62□□□□□ -0.87
BDNF-202ENST00000356660 IGHV7-81A0A0B4J1V7 117 aa9.61□□□□□ -0.87
BDNF-202ENST00000356660 DEFB131AP59861 70 aa9.61□□□□□ -0.87
BDNF-202ENST00000356660 CIRBPQ14011 172 aaKnown RBP9.61□□□□□ -0.87
BDNF-202ENST00000356660 DAZ1Q9NQZ3 744 aaKnown RBP9.61□□□□□ -0.87
BDNF-202ENST00000356660 USP24Q9UPU5 2620 aa9.61□□□□□ -0.87
BDNF-202ENST00000356660 GATD1Q8NB37 220 aa9.61□□□□□ -0.87
BDNF-202ENST00000356660 FAM110DQ8TAY7 271 aaPredicted RBP9.61□□□□□ -0.87
BDNF-202ENST00000356660 Q8NA96 180 aa9.6□□□□□ -0.87
BDNF-202ENST00000356660 PHLDA1Q8WV24 401 aaPredicted RBP9.6□□□□□ -0.87
BDNF-202ENST00000356660 MRPS12O15235 138 aaKnown RBP9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms