RNA–Protein interactions for RNA: ENST00000355765.10

PRPF39-201, Transcript of pre-mRNA processing factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF39, Length 2,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-201ENST00000355765 MUC4Q99102 2169 aa14.25□□□□□ -0.13
PRPF39-201ENST00000355765 TRAV8-4A0A0B4J246 113 aa14.24□□□□□ -0.13
PRPF39-201ENST00000355765 ODF3BA8MYP8 253 aa14.24□□□□□ -0.13
PRPF39-201ENST00000355765 PAPPA-AS1Q5QFB9 102 aa14.24□□□□□ -0.13
PRPF39-201ENST00000355765 MUSTN1Q8IVN3 82 aa14.24□□□□□ -0.13
PRPF39-201ENST00000355765 CENPVL3A0A0U1RRI6 287 aa14.24□□□□□ -0.13
PRPF39-201ENST00000355765 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP14.24□□□□□ -0.13
PRPF39-201ENST00000355765 ATP6V0E1O15342 81 aa14.24□□□□□ -0.13
PRPF39-201ENST00000355765 LINC01620Q4KN68 170 aa14.24□□□□□ -0.13
PRPF39-201ENST00000355765 FOXC1Q12948 553 aa14.24□□□□□ -0.13
PRPF39-201ENST00000355765 SPTBN4Q9H254 2564 aa14.23□□□□□ -0.13
PRPF39-201ENST00000355765 TRAV21A0A0B4J279 112 aa14.23□□□□□ -0.13
PRPF39-201ENST00000355765 F6UB75 175 aa14.23□□□□□ -0.13
PRPF39-201ENST00000355765 Q8N6K4 173 aa14.23□□□□□ -0.13
PRPF39-201ENST00000355765 C3orf56Q8N813 242 aa14.23□□□□□ -0.13
PRPF39-201ENST00000355765 Q8N9W7 124 aa14.23□□□□□ -0.13
PRPF39-201ENST00000355765 IGFL3Q6UXB1 125 aa14.23□□□□□ -0.13
PRPF39-201ENST00000355765 IGKV3-7A0A075B6H7 116 aa14.22□□□□□ -0.13
PRPF39-201ENST00000355765 A0A087WWL8 130 aa14.22□□□□□ -0.13
PRPF39-201ENST00000355765 FAM110DQ8TAY7 271 aaPredicted RBP14.22□□□□□ -0.13
PRPF39-201ENST00000355765 MRPL53Q96EL3 112 aaKnown RBP14.22□□□□□ -0.13
PRPF39-201ENST00000355765 SPTBN1Q01082 2364 aaKnown RBP14.22□□□□□ -0.13
PRPF39-201ENST00000355765 F5H697 171 aa14.21□□□□□ -0.13
PRPF39-201ENST00000355765 CD3EP07766 207 aa14.21□□□□□ -0.13
PRPF39-201ENST00000355765 RNASE3P12724 160 aaKnown RBP14.21□□□□□ -0.13
PRPF39-201ENST00000355765 ZNF580Q9UK33 172 aa14.21□□□□□ -0.13
PRPF39-201ENST00000355765 ATXN8Q156A1 80 aa14.21□□□□□ -0.13
PRPF39-201ENST00000355765 IGHV1-69DA0A0B4J2H0 117 aa14.2□□□□□ -0.14
PRPF39-201ENST00000355765 LINC01560Q8TB33 94 aa14.2□□□□□ -0.14
PRPF39-201ENST00000355765 FAM110AQ9BQ89 295 aa14.2□□□□□ -0.14
PRPF39-201ENST00000355765 ADARB2-AS1A8MUL3 147 aa14.2□□□□□ -0.14
PRPF39-201ENST00000355765 ZNF256Q9Y2P7 627 aaPredicted RBP14.2□□□□□ -0.14
PRPF39-201ENST00000355765 ZFHX3Q15911 3703 aa14.19□□□□□ -0.14
PRPF39-201ENST00000355765 ZNF876PQ49A33 203 aa14.19□□□□□ -0.14
PRPF39-201ENST00000355765 SUMO4Q6EEV6 95 aa14.19□□□□□ -0.14
PRPF39-201ENST00000355765 OR10J6PQ8NGY7 276 aa14.19□□□□□ -0.14
PRPF39-201ENST00000355765 IGF2RP11717 2491 aa14.19□□□□□ -0.14
PRPF39-201ENST00000355765 ANKHD1Q8IWZ3 2542 aaKnown RBP14.19□□□□□ -0.14
PRPF39-201ENST00000355765 H3BMM0 161 aa14.18□□□□□ -0.14
PRPF39-201ENST00000355765 TRIAP1O43715 76 aa14.18□□□□□ -0.14
PRPF39-201ENST00000355765 ITLN2Q8WWU7 325 aaPredicted RBP14.18□□□□□ -0.14
PRPF39-201ENST00000355765 UBE2WQ96B02 151 aa14.18□□□□□ -0.14
PRPF39-201ENST00000355765 P0DMU3 169 aa14.18□□□□□ -0.14
PRPF39-201ENST00000355765 FAM231AP0DMU4 169 aa14.18□□□□□ -0.14
PRPF39-201ENST00000355765 FAM231CP0DMU5 169 aa14.18□□□□□ -0.14
PRPF39-201ENST00000355765 LINC00315P59091 139 aa14.18□□□□□ -0.14
PRPF39-201ENST00000355765 SDHAF1A6NFY7 115 aa14.17□□□□□ -0.14
PRPF39-201ENST00000355765 PPP1R17O96001 155 aa14.17□□□□□ -0.14
PRPF39-201ENST00000355765 POLR2KP53803 58 aaKnown RBP14.17□□□□□ -0.14
PRPF39-201ENST00000355765 TMEM141Q96I45 108 aa14.17□□□□□ -0.14
PRPF39-201ENST00000355765 LINC00527Q9UJ94 153 aa14.17□□□□□ -0.14
PRPF39-201ENST00000355765 A0A0B4J2C4 111 aa14.17□□□□□ -0.14
PRPF39-201ENST00000355765 M0QXV9 152 aa14.17□□□□□ -0.14
PRPF39-201ENST00000355765 RPL11P62913 178 aaKnown RBP14.17□□□□□ -0.14
PRPF39-201ENST00000355765 MEIG1Q5JSS6 88 aa14.17□□□□□ -0.14
PRPF39-201ENST00000355765 EEF1AKMT3Q96AZ1 226 aa14.17□□□□□ -0.14
PRPF39-201ENST00000355765 LINC00477Q96M19 166 aa14.17□□□□□ -0.14
PRPF39-201ENST00000355765 FAM74A4Q5TZK3 123 aa14.16□□□□□ -0.14
PRPF39-201ENST00000355765 C9orf139Q6ZV77 190 aa14.16□□□□□ -0.14
PRPF39-201ENST00000355765 C2orf82Q6UX34 121 aa14.16□□□□□ -0.14
PRPF39-201ENST00000355765 TIMM17AQ99595 171 aa14.16□□□□□ -0.14
PRPF39-201ENST00000355765 KIF25-AS1Q9Y6Z4 181 aa14.16□□□□□ -0.14
PRPF39-201ENST00000355765 TRBV10-2A0A0K0K1G8 114 aa14.16□□□□□ -0.14
PRPF39-201ENST00000355765 M0R1W7 72 aa14.15□□□□□ -0.14
PRPF39-201ENST00000355765 VCYO14598 125 aa14.15□□□□□ -0.14
PRPF39-201ENST00000355765 Q6Q795 121 aa14.15□□□□□ -0.14
PRPF39-201ENST00000355765 LENEPQ9Y5L5 61 aa14.15□□□□□ -0.14
PRPF39-201ENST00000355765 U3KQE9 123 aa14.15□□□□□ -0.14
PRPF39-201ENST00000355765 LEPROTO15243 131 aa14.15□□□□□ -0.14
PRPF39-201ENST00000355765 Q6ZSV7 163 aa14.15□□□□□ -0.14
PRPF39-201ENST00000355765 CHCHD5Q9BSY4 110 aa14.15□□□□□ -0.14
PRPF39-201ENST00000355765 TMEM223A0PJW6 202 aa14.14□□□□□ -0.15
PRPF39-201ENST00000355765 DUX3Q96PT4 197 aa14.14□□□□□ -0.15
PRPF39-201ENST00000355765 LGALS9O00182 355 aa14.14□□□□□ -0.15
PRPF39-201ENST00000355765 PRSS2P07478 247 aa14.14□□□□□ -0.15
PRPF39-201ENST00000355765 NPC2P61916 151 aa14.14□□□□□ -0.15
PRPF39-201ENST00000355765 EBI3Q14213 229 aa14.14□□□□□ -0.15
PRPF39-201ENST00000355765 ZNF56Q15929 161 aa14.14□□□□□ -0.15
PRPF39-201ENST00000355765 PTPRQQ9UMZ3 2332 aa14.14□□□□□ -0.15
PRPF39-201ENST00000355765 RPL13AP40429 203 aaKnown RBP14.13□□□□□ -0.15
PRPF39-201ENST00000355765 UNQ9165/PRO28630Q6UXU0 137 aa14.13□□□□□ -0.15
PRPF39-201ENST00000355765 TLN1Q9Y490 2541 aaKnown RBP14.13□□□□□ -0.15
PRPF39-201ENST00000355765 A0A0J9YXV3 536 aa14.12□□□□□ -0.15
PRPF39-201ENST00000355765 SPTA1P02549 2419 aa14.12□□□□□ -0.15
PRPF39-201ENST00000355765 IGHV4OR15-8A0A075B7B6 117 aa14.12□□□□□ -0.15
PRPF39-201ENST00000355765 A0A087WW49 117 aa14.12□□□□□ -0.15
PRPF39-201ENST00000355765 ZNF22P17026 224 aaPredicted RBP14.12□□□□□ -0.15
PRPF39-201ENST00000355765 GRNP28799 593 aaKnown RBP14.12□□□□□ -0.15
PRPF39-201ENST00000355765 CLEC2BQ92478 149 aa14.12□□□□□ -0.15
PRPF39-201ENST00000355765 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.12□□□□□ -0.15
PRPF39-201ENST00000355765 H7C423 109 aa14.12□□□□□ -0.15
PRPF39-201ENST00000355765 PRR30Q53SZ7 412 aaPredicted RBP14.12□□□□□ -0.15
PRPF39-201ENST00000355765 TRBV12-3P01733 135 aa14.11□□□□□ -0.15
PRPF39-201ENST00000355765 UBE2E1P51965 193 aa14.11□□□□□ -0.15
PRPF39-201ENST00000355765 NBASA2RRP1 2371 aa14.11□□□□□ -0.15
PRPF39-201ENST00000355765 A0A0J9YXY3 114 aa14.1□□□□□ -0.15
PRPF39-201ENST00000355765 OVOL1O14753 267 aa14.1□□□□□ -0.15
PRPF39-201ENST00000355765 BRI3O95415 125 aa14.1□□□□□ -0.15
PRPF39-201ENST00000355765 TRBV7-1A0A0A6YYK4 115 aa14.1□□□□□ -0.15
PRPF39-201ENST00000355765 POM121L12Q8N7R1 296 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms