RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 LINC00322Q6ZN03 302 aaPredicted RBP9.45□□□□□ -0.9
PCDHB11-201ENST00000354757 ZNF479Q96JC4 524 aa9.45□□□□□ -0.9
PCDHB11-201ENST00000354757 RPL36AP83881 106 aaKnown RBP9.45□□□□□ -0.9
PCDHB11-201ENST00000354757 ETDBQ3ZM63 59 aa9.45□□□□□ -0.9
PCDHB11-201ENST00000354757 ADAMTSL5Q6ZMM2 481 aa9.45□□□□□ -0.9
PCDHB11-201ENST00000354757 RPL36ALQ969Q0 106 aaKnown RBP9.45□□□□□ -0.9
PCDHB11-201ENST00000354757 GFRA4Q9GZZ7 299 aa9.45□□□□□ -0.9
PCDHB11-201ENST00000354757 C9orf118A6NHY6 69 aa9.44□□□□□ -0.9
PCDHB11-201ENST00000354757 CT83Q5H943 113 aa9.44□□□□□ -0.9
PCDHB11-201ENST00000354757 C18orf65Q6ZTR6 163 aa9.44□□□□□ -0.9
PCDHB11-201ENST00000354757 CHD6Q8TD26 2715 aa9.44□□□□□ -0.9
PCDHB11-201ENST00000354757 IGF1P05019 195 aa9.44□□□□□ -0.9
PCDHB11-201ENST00000354757 COX8AP10176 69 aa9.44□□□□□ -0.9
PCDHB11-201ENST00000354757 Q6ZSV7 163 aa9.44□□□□□ -0.9
PCDHB11-201ENST00000354757 IGHG4P01861 327 aa9.44□□□□□ -0.9
PCDHB11-201ENST00000354757 GTSF1Q8WW33 167 aa9.44□□□□□ -0.9
PCDHB11-201ENST00000354757 MRAP2Q96G30 205 aa9.44□□□□□ -0.9
PCDHB11-201ENST00000354757 TRAV13-1A0A0B4J241 112 aa9.43□□□□□ -0.9
PCDHB11-201ENST00000354757 CKS1BP61024 79 aa9.43□□□□□ -0.9
PCDHB11-201ENST00000354757 LRRC75A-AS1Q8N1F1 130 aa9.43□□□□□ -0.9
PCDHB11-201ENST00000354757 APOMO95445 188 aa9.43□□□□□ -0.9
PCDHB11-201ENST00000354757 IGF2BP2-AS1Q96M15 143 aa9.43□□□□□ -0.9
PCDHB11-201ENST00000354757 ATP6V0BQ99437 205 aa9.43□□□□□ -0.9
PCDHB11-201ENST00000354757 ESM1Q9NQ30 184 aa9.43□□□□□ -0.9
PCDHB11-201ENST00000354757 IGSF10Q6WRI0 2623 aa9.43□□□□□ -0.9
PCDHB11-201ENST00000354757 A0A087WX48 190 aa9.43□□□□□ -0.9
PCDHB11-201ENST00000354757 C11orf68Q9H3H3 251 aaKnown RBP9.43□□□□□ -0.9
PCDHB11-201ENST00000354757 FLNCQ14315 2725 aa9.42□□□□□ -0.9
PCDHB11-201ENST00000354757 SDHAF1A6NFY7 115 aa9.42□□□□□ -0.9
PCDHB11-201ENST00000354757 DEFB4AO15263 64 aa9.42□□□□□ -0.9
PCDHB11-201ENST00000354757 AZU1P20160 251 aa9.42□□□□□ -0.9
PCDHB11-201ENST00000354757 H3BRM9 83 aa9.42□□□□□ -0.9
PCDHB11-201ENST00000354757 K7ERJ3 54 aa9.42□□□□□ -0.9
PCDHB11-201ENST00000354757 VCYO14598 125 aa9.42□□□□□ -0.9
PCDHB11-201ENST00000354757 DPM2O94777 84 aa9.42□□□□□ -0.9
PCDHB11-201ENST00000354757 LY6G6DO95868 133 aa9.42□□□□□ -0.9
PCDHB11-201ENST00000354757 ZNF80P51504 273 aaPredicted RBP9.42□□□□□ -0.9
PCDHB11-201ENST00000354757 CMC4P56277 68 aaPredicted RBP9.42□□□□□ -0.9
PCDHB11-201ENST00000354757 ZC2HC1BQ5TFG8 222 aa9.42□□□□□ -0.9
PCDHB11-201ENST00000354757 GPHB5Q86YW7 130 aa9.42□□□□□ -0.9
PCDHB11-201ENST00000354757 Q8N6K4 173 aa9.42□□□□□ -0.9
PCDHB11-201ENST00000354757 CHTOPQ9Y3Y2 248 aaKnown RBP9.42□□□□□ -0.9
PCDHB11-201ENST00000354757 F5H768 121 aa9.42□□□□□ -0.9
PCDHB11-201ENST00000354757 K7EP34 96 aa9.42□□□□□ -0.9
PCDHB11-201ENST00000354757 RNASE13Q5GAN3 156 aaKnown RBP9.42□□□□□ -0.9
PCDHB11-201ENST00000354757 ZNRF2Q8NHG8 242 aa9.42□□□□□ -0.9
PCDHB11-201ENST00000354757 NOP10Q9NPE3 64 aaKnown RBP9.42□□□□□ -0.9
PCDHB11-201ENST00000354757 K7EMI3 77 aa9.41□□□□□ -0.9
PCDHB11-201ENST00000354757 SIGLEC8Q9NYZ4 499 aa9.41□□□□□ -0.9
PCDHB11-201ENST00000354757 AMTNQ6UX39 209 aa9.41□□□□□ -0.9
PCDHB11-201ENST00000354757 FOXI2Q6ZQN5 318 aa9.41□□□□□ -0.9
PCDHB11-201ENST00000354757 TEX48A0A1B0GUV7 120 aa9.41□□□□□ -0.9
PCDHB11-201ENST00000354757 PCP2Q8IVA1 136 aa9.41□□□□□ -0.9
PCDHB11-201ENST00000354757 CLPSL1A2RUU4 121 aa9.4□□□□□ -0.9
PCDHB11-201ENST00000354757 GDF5OSQ5U4N7 250 aa9.4□□□□□ -0.9
PCDHB11-201ENST00000354757 C2orf66Q6UXQ4 117 aa9.4□□□□□ -0.9
PCDHB11-201ENST00000354757 SPAG8Q99932 426 aaPredicted RBP9.4□□□□□ -0.9
PCDHB11-201ENST00000354757 IGKCP01834 107 aa9.4□□□□□ -0.91
PCDHB11-201ENST00000354757 PRADC1Q9BSG0 188 aa9.4□□□□□ -0.91
PCDHB11-201ENST00000354757 JPT2Q9H910 190 aa9.4□□□□□ -0.91
PCDHB11-201ENST00000354757 TP53TG1Q9Y2A0 90 aa9.4□□□□□ -0.91
PCDHB11-201ENST00000354757 EDN2P20800 178 aa9.39□□□□□ -0.91
PCDHB11-201ENST00000354757 NPC2P61916 151 aa9.39□□□□□ -0.91
PCDHB11-201ENST00000354757 TET2Q6N021 2002 aaPredicted RBP9.39□□□□□ -0.91
PCDHB11-201ENST00000354757 A0A1W2PPM0 123 aa9.39□□□□□ -0.91
PCDHB11-201ENST00000354757 ADARB2-AS1A8MUL3 147 aa9.39□□□□□ -0.91
PCDHB11-201ENST00000354757 LYRM7Q5U5X0 104 aa9.39□□□□□ -0.91
PCDHB11-201ENST00000354757 TTTY13Q9BZ97 58 aa9.39□□□□□ -0.91
PCDHB11-201ENST00000354757 KLF5Q13887 457 aaPredicted RBP9.39□□□□□ -0.91
PCDHB11-201ENST00000354757 Q8N1Y9 231 aa9.39□□□□□ -0.91
PCDHB11-201ENST00000354757 RPL39LQ96EH5 51 aaKnown RBP9.39□□□□□ -0.91
PCDHB11-201ENST00000354757 U3KQE9 123 aa9.39□□□□□ -0.91
PCDHB11-201ENST00000354757 Q8N976 141 aa9.38□□□□□ -0.91
PCDHB11-201ENST00000354757 ZNF747Q9BV97 191 aa9.38□□□□□ -0.91
PCDHB11-201ENST00000354757 ZFAND3Q9H8U3 227 aa9.38□□□□□ -0.91
PCDHB11-201ENST00000354757 A0A0J9YY99 117 aa9.38□□□□□ -0.91
PCDHB11-201ENST00000354757 SCRT2Q9NQ03 307 aa9.38□□□□□ -0.91
PCDHB11-201ENST00000354757 H3BMG7 143 aa9.38□□□□□ -0.91
PCDHB11-201ENST00000354757 OR13C6PQ8NH95 151 aa9.38□□□□□ -0.91
PCDHB11-201ENST00000354757 ZNF625Q96I27 306 aaPredicted RBP9.38□□□□□ -0.91
PCDHB11-201ENST00000354757 CHAC1Q9BUX1 264 aa9.38□□□□□ -0.91
PCDHB11-201ENST00000354757 ZNF815PA8K554 130 aa9.38□□□□□ -0.91
PCDHB11-201ENST00000354757 KLF12Q9Y4X4 402 aa9.38□□□□□ -0.91
PCDHB11-201ENST00000354757 TMEM238LA0A1B0GVL6 79 aa9.37□□□□□ -0.91
PCDHB11-201ENST00000354757 A6NJY4 79 aa9.37□□□□□ -0.91
PCDHB11-201ENST00000354757 IGLV2-8P01709 118 aa9.37□□□□□ -0.91
PCDHB11-201ENST00000354757 DAD1P61803 113 aa9.37□□□□□ -0.91
PCDHB11-201ENST00000354757 SH2D6Q7Z4S9 175 aa9.37□□□□□ -0.91
PCDHB11-201ENST00000354757 DPH3Q96FX2 82 aa9.37□□□□□ -0.91
PCDHB11-201ENST00000354757 SPXQ9BT56 116 aa9.37□□□□□ -0.91
PCDHB11-201ENST00000354757 MDFICQ9P1T7 246 aa9.37□□□□□ -0.91
PCDHB11-201ENST00000354757 GAGE12HA6NDE8 117 aa9.37□□□□□ -0.91
PCDHB11-201ENST00000354757 SPATA12Q7Z6I5 190 aa9.37□□□□□ -0.91
PCDHB11-201ENST00000354757 MRPL53Q96EL3 112 aaKnown RBP9.37□□□□□ -0.91
PCDHB11-201ENST00000354757 DKK2Q9UBU2 259 aa9.37□□□□□ -0.91
PCDHB11-201ENST00000354757 K7EMT4 169 aa9.36□□□□□ -0.91
PCDHB11-201ENST00000354757 ZNF48Q96MX3 618 aaPredicted RBP9.36□□□□□ -0.91
PCDHB11-201ENST00000354757 CIRBPQ14011 172 aaKnown RBP9.36□□□□□ -0.91
PCDHB11-201ENST00000354757 LINC01006Q8NI28 216 aa9.36□□□□□ -0.91
PCDHB11-201ENST00000354757 C20orf173Q96LM9 149 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms