RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 RAI1Q7Z5J4 1906 aaPredicted RBP9.89□□□□□ -0.83
COL6A3-203ENST00000353578 H7C423 109 aa9.89□□□□□ -0.83
COL6A3-203ENST00000353578 LECT2O14960 151 aa9.89□□□□□ -0.83
COL6A3-203ENST00000353578 ZNF71Q9NQZ8 489 aaPredicted RBP9.89□□□□□ -0.83
COL6A3-203ENST00000353578 EFNA2O43921 213 aa9.89□□□□□ -0.83
COL6A3-203ENST00000353578 C15orf65H3BRN8 121 aa9.88□□□□□ -0.83
COL6A3-203ENST00000353578 UFSP1Q6NVU6 142 aa9.88□□□□□ -0.83
COL6A3-203ENST00000353578 NRACQ8N912 160 aa9.88□□□□□ -0.83
COL6A3-203ENST00000353578 AGPAT4-IT1Q9H0P7 198 aa9.88□□□□□ -0.83
COL6A3-203ENST00000353578 TEX22C9J3V5 150 aa9.88□□□□□ -0.83
COL6A3-203ENST00000353578 PMAIP1Q13794 54 aa9.88□□□□□ -0.83
COL6A3-203ENST00000353578 C19orf71A6NCJ1 209 aa9.88□□□□□ -0.83
COL6A3-203ENST00000353578 GPR179Q6PRD1 2367 aa9.88□□□□□ -0.83
COL6A3-203ENST00000353578 MPLKIPQ8TAP9 179 aa9.88□□□□□ -0.83
COL6A3-203ENST00000353578 CCDC179H3BU77 68 aa9.87□□□□□ -0.83
COL6A3-203ENST00000353578 STPG1Q5TH74 334 aa9.87□□□□□ -0.83
COL6A3-203ENST00000353578 TRAV7A0A075B6U4 112 aa9.87□□□□□ -0.83
COL6A3-203ENST00000353578 C5orf24Q7Z6I8 188 aa9.87□□□□□ -0.83
COL6A3-203ENST00000353578 UBE2E1P51965 193 aa9.87□□□□□ -0.83
COL6A3-203ENST00000353578 C9orf47Q6ZRZ4 202 aa9.87□□□□□ -0.83
COL6A3-203ENST00000353578 MSRB2Q9Y3D2 182 aa9.87□□□□□ -0.83
COL6A3-203ENST00000353578 ZNF503Q96F45 646 aa9.87□□□□□ -0.83
COL6A3-203ENST00000353578 DEFB124Q8NES8 71 aa9.87□□□□□ -0.83
COL6A3-203ENST00000353578 U3KQK5 164 aa9.87□□□□□ -0.83
COL6A3-203ENST00000353578 K7ENP7 123 aa9.87□□□□□ -0.83
COL6A3-203ENST00000353578 LINC00694P0DN24 101 aa9.87□□□□□ -0.83
COL6A3-203ENST00000353578 DIRC1Q969H9 104 aa9.87□□□□□ -0.83
COL6A3-203ENST00000353578 IGHV7-4-1A0A0J9YVY3 117 aa9.86□□□□□ -0.83
COL6A3-203ENST00000353578 ETDCA0A1B0GVM5 59 aa9.86□□□□□ -0.83
COL6A3-203ENST00000353578 KAAG1Q9UBP8 84 aa9.86□□□□□ -0.83
COL6A3-203ENST00000353578 E9PLN8 166 aa9.86□□□□□ -0.83
COL6A3-203ENST00000353578 SDIM1Q6ZPB5 146 aa9.86□□□□□ -0.83
COL6A3-203ENST00000353578 CLEC2BQ92478 149 aa9.86□□□□□ -0.83
COL6A3-203ENST00000353578 FGF23Q9GZV9 251 aaPredicted RBP9.86□□□□□ -0.83
COL6A3-203ENST00000353578 RPP25Q9BUL9 199 aaKnown RBP9.86□□□□□ -0.83
COL6A3-203ENST00000353578 CLPSP04118 112 aa9.85□□□□□ -0.83
COL6A3-203ENST00000353578 FAM19A5Q7Z5A7 132 aaPredicted RBP9.85□□□□□ -0.83
COL6A3-203ENST00000353578 ZNF524Q96C55 264 aa9.85□□□□□ -0.83
COL6A3-203ENST00000353578 CLPSL1A2RUU4 121 aa9.85□□□□□ -0.83
COL6A3-203ENST00000353578 NDPQ00604 133 aa9.85□□□□□ -0.83
COL6A3-203ENST00000353578 RNF114Q9Y508 228 aa9.85□□□□□ -0.83
COL6A3-203ENST00000353578 CD24P25063 80 aa9.85□□□□□ -0.83
COL6A3-203ENST00000353578 ZNF491Q8N8L2 437 aa9.85□□□□□ -0.83
COL6A3-203ENST00000353578 ABCA2Q9BZC7 2435 aa9.85□□□□□ -0.83
COL6A3-203ENST00000353578 PSCAO43653 123 aa9.85□□□□□ -0.83
COL6A3-203ENST00000353578 C9orf106Q8NAJ2 232 aa9.85□□□□□ -0.83
COL6A3-203ENST00000353578 NSUN5P1Q3KNT7 163 aa9.85□□□□□ -0.83
COL6A3-203ENST00000353578 FAM167A-AS1Q96KT0 104 aa9.85□□□□□ -0.83
COL6A3-203ENST00000353578 A0A0J9YX75 114 aa9.84□□□□□ -0.83
COL6A3-203ENST00000353578 LST1O00453 97 aa9.84□□□□□ -0.83
COL6A3-203ENST00000353578 PIP4P2Q8N4L2 257 aa9.84□□□□□ -0.83
COL6A3-203ENST00000353578 RS1O15537 224 aa9.84□□□□□ -0.83
COL6A3-203ENST00000353578 UBE2E2Q96LR5 201 aa9.84□□□□□ -0.83
COL6A3-203ENST00000353578 TRBV7-3A0A075B6L6 115 aa9.84□□□□□ -0.83
COL6A3-203ENST00000353578 APOC4P55056 127 aa9.84□□□□□ -0.83
COL6A3-203ENST00000353578 ZNRF2Q8NHG8 242 aa9.84□□□□□ -0.83
COL6A3-203ENST00000353578 TLN1Q9Y490 2541 aaKnown RBP9.84□□□□□ -0.83
COL6A3-203ENST00000353578 WI2-2373I1.2A0A1W2PRP0 233 aa9.84□□□□□ -0.83
COL6A3-203ENST00000353578 Q6ZSR3 168 aa9.84□□□□□ -0.83
COL6A3-203ENST00000353578 WISP1O95388 367 aa9.84□□□□□ -0.83
COL6A3-203ENST00000353578 IGHV3-30-3P0DP02 117 aa9.83□□□□□ -0.84
COL6A3-203ENST00000353578 RETNQ9HD89 108 aa9.83□□□□□ -0.84
COL6A3-203ENST00000353578 XGP55808 180 aa9.83□□□□□ -0.84
COL6A3-203ENST00000353578 VPREB3Q9UKI3 123 aa9.83□□□□□ -0.84
COL6A3-203ENST00000353578 HTN3P15516 51 aa9.83□□□□□ -0.84
COL6A3-203ENST00000353578 LINC00173Q6ZV60 143 aa9.83□□□□□ -0.84
COL6A3-203ENST00000353578 NEXN-AS1Q8NBZ9 246 aa9.83□□□□□ -0.84
COL6A3-203ENST00000353578 C11orf1Q9H5F2 150 aa9.82□□□□□ -0.84
COL6A3-203ENST00000353578 B4DSR2 109 aa9.82□□□□□ -0.84
COL6A3-203ENST00000353578 K7EQD1 137 aa9.82□□□□□ -0.84
COL6A3-203ENST00000353578 TRBV10-1A0A0K0K1A3 114 aa9.81□□□□□ -0.84
COL6A3-203ENST00000353578 IGHV3-33P01772 117 aa9.81□□□□□ -0.84
COL6A3-203ENST00000353578 KLHL30-AS1Q8NEE0 82 aa9.81□□□□□ -0.84
COL6A3-203ENST00000353578 ODF3Q96PU9 254 aa9.81□□□□□ -0.84
COL6A3-203ENST00000353578 MIFP14174 115 aa9.81□□□□□ -0.84
COL6A3-203ENST00000353578 NDUFA1O15239 70 aa9.81□□□□□ -0.84
COL6A3-203ENST00000353578 C17orf58Q2M2W7 97 aa9.81□□□□□ -0.84
COL6A3-203ENST00000353578 C2orf91Q6ZV80 131 aa9.81□□□□□ -0.84
COL6A3-203ENST00000353578 MBD3L4A6NDZ8 208 aaPredicted RBP9.81□□□□□ -0.84
COL6A3-203ENST00000353578 MBD3L3A6NE82 208 aaPredicted RBP9.81□□□□□ -0.84
COL6A3-203ENST00000353578 MBD3L5A6NJ08 208 aaPredicted RBP9.81□□□□□ -0.84
COL6A3-203ENST00000353578 SPINK13Q1W4C9 94 aa9.81□□□□□ -0.84
COL6A3-203ENST00000353578 MBD3L2Q8NHZ7 208 aaPredicted RBP9.81□□□□□ -0.84
COL6A3-203ENST00000353578 OVOL3O00110 214 aa9.8□□□□□ -0.84
COL6A3-203ENST00000353578 ITGBL1O95965 494 aaPredicted RBP9.8□□□□□ -0.84
COL6A3-203ENST00000353578 CASC2Q6XLA1 102 aa9.8□□□□□ -0.84
COL6A3-203ENST00000353578 FAM27E3Q08E93 113 aa9.8□□□□□ -0.84
COL6A3-203ENST00000353578 PIK3CD-AS1Q5SR53 167 aa9.8□□□□□ -0.84
COL6A3-203ENST00000353578 LRP4O75096 1905 aa9.8□□□□□ -0.84
COL6A3-203ENST00000353578 ZNF672Q499Z4 452 aaPredicted RBP9.8□□□□□ -0.84
COL6A3-203ENST00000353578 IBA57-AS1B1ANH7 110 aa9.8□□□□□ -0.84
COL6A3-203ENST00000353578 TRIAP1O43715 76 aa9.79□□□□□ -0.84
COL6A3-203ENST00000353578 COX7BP24311 80 aa9.79□□□□□ -0.84
COL6A3-203ENST00000353578 PRR31Q5SQ13 230 aa9.79□□□□□ -0.84
COL6A3-203ENST00000353578 C3orf56Q8N813 242 aa9.79□□□□□ -0.84
COL6A3-203ENST00000353578 C16orf74Q96GX8 76 aa9.79□□□□□ -0.84
COL6A3-203ENST00000353578 SPAARA0A1B0GVQ0 90 aa9.79□□□□□ -0.84
COL6A3-203ENST00000353578 WFDC11Q8NEX6 87 aa9.79□□□□□ -0.84
COL6A3-203ENST00000353578 ENHOQ6UWT2 76 aa9.79□□□□□ -0.84
COL6A3-203ENST00000353578 GNLYP22749 145 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms