RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 TRGV11A0A075B6L2 103 aa5.08□□□□□ -1.6
TRIM55-203ENST00000350034 TRAV9-2A0A087WT02 112 aa5.08□□□□□ -1.6
TRIM55-203ENST00000350034 TRAV26-2A0A0B4J265 109 aa5.08□□□□□ -1.6
TRIM55-203ENST00000350034 C20orf202A1L168 122 aa5.08□□□□□ -1.6
TRIM55-203ENST00000350034 FCER1GP30273 86 aa5.08□□□□□ -1.6
TRIM55-203ENST00000350034 CMC4P56277 68 aaPredicted RBP5.08□□□□□ -1.6
TRIM55-203ENST00000350034 RPL32P62910 135 aaKnown RBP5.08□□□□□ -1.6
TRIM55-203ENST00000350034 CTAG1AP78358 180 aa5.08□□□□□ -1.6
TRIM55-203ENST00000350034 ZNF124Q15973 351 aa5.08□□□□□ -1.6
TRIM55-203ENST00000350034 NDUFA11Q86Y39 141 aa5.08□□□□□ -1.6
TRIM55-203ENST00000350034 Q8N1Y9 231 aa5.08□□□□□ -1.6
TRIM55-203ENST00000350034 C14orf178Q8N769 122 aaPredicted RBP5.08□□□□□ -1.6
TRIM55-203ENST00000350034 PTH2Q96A98 100 aa5.08□□□□□ -1.6
TRIM55-203ENST00000350034 C14orf144Q96I85 54 aa5.08□□□□□ -1.6
TRIM55-203ENST00000350034 FAM110AQ9BQ89 295 aa5.08□□□□□ -1.6
TRIM55-203ENST00000350034 C20orf78Q9BR46 151 aa5.08□□□□□ -1.6
TRIM55-203ENST00000350034 MIEN1Q9BRT3 115 aa5.08□□□□□ -1.6
TRIM55-203ENST00000350034 MAP1LC3CQ9BXW4 147 aa5.08□□□□□ -1.6
TRIM55-203ENST00000350034 ZNF469Q96JG9 3925 aaPredicted RBP5.08□□□□□ -1.6
TRIM55-203ENST00000350034 INAFM1C9JVW0 142 aa5.07□□□□□ -1.6
TRIM55-203ENST00000350034 K7EMI3 77 aa5.07□□□□□ -1.6
TRIM55-203ENST00000350034 PPP1R17O96001 155 aa5.07□□□□□ -1.6
TRIM55-203ENST00000350034 IGLV1-51P01701 117 aa5.07□□□□□ -1.6
TRIM55-203ENST00000350034 CRYGDP07320 174 aa5.07□□□□□ -1.6
TRIM55-203ENST00000350034 DEFA6Q01524 100 aa5.07□□□□□ -1.6
TRIM55-203ENST00000350034 PIK3CD-AS1Q5SR53 167 aa5.07□□□□□ -1.6
TRIM55-203ENST00000350034 TRPT1Q86TN4 253 aaKnown RBP5.07□□□□□ -1.6
TRIM55-203ENST00000350034 SMIM2Q9BVW6 85 aa5.07□□□□□ -1.6
TRIM55-203ENST00000350034 PAM16Q9Y3D7 125 aa5.07□□□□□ -1.6
TRIM55-203ENST00000350034 TRBV6-5A0A0K0K1A5 114 aa5.06□□□□□ -1.6
TRIM55-203ENST00000350034 CRLF1O75462 422 aa5.06□□□□□ -1.6
TRIM55-203ENST00000350034 IGLC3P0DOY3 106 aa5.06□□□□□ -1.6
TRIM55-203ENST00000350034 FXYD7P58549 80 aa5.06□□□□□ -1.6
TRIM55-203ENST00000350034 SUMO2P61956 95 aaKnown RBP5.06□□□□□ -1.6
TRIM55-203ENST00000350034 BEAN1Q3B7T3 259 aa5.06□□□□□ -1.6
TRIM55-203ENST00000350034 LGALS9BQ3B8N2 356 aa5.06□□□□□ -1.6
TRIM55-203ENST00000350034 SPATA45Q537H7 98 aa5.06□□□□□ -1.6
TRIM55-203ENST00000350034 LGALS9CQ6DKI2 356 aa5.06□□□□□ -1.6
TRIM55-203ENST00000350034 SYT8Q8NBV8 401 aa5.06□□□□□ -1.6
TRIM55-203ENST00000350034 IFI27L1Q96BM0 104 aa5.06□□□□□ -1.6
TRIM55-203ENST00000350034 JPT2Q9H910 190 aa5.06□□□□□ -1.6
TRIM55-203ENST00000350034 C19orf73Q9NVV2 129 aa5.06□□□□□ -1.6
TRIM55-203ENST00000350034 SONP18583 2426 aaKnown RBP5.06□□□□□ -1.6
TRIM55-203ENST00000350034 SVEP1Q4LDE5 3571 aa5.05□□□□□ -1.6
TRIM55-203ENST00000350034 ANK3Q12955 4377 aaKnown RBP5.05□□□□□ -1.6
TRIM55-203ENST00000350034 CBY3A6NI87 242 aa5.05□□□□□ -1.6
TRIM55-203ENST00000350034 OR11H12B2RN74 326 aa5.05□□□□□ -1.6
TRIM55-203ENST00000350034 MGPP08493 103 aa5.05□□□□□ -1.6
TRIM55-203ENST00000350034 IGLL1P15814 213 aa5.05□□□□□ -1.6
TRIM55-203ENST00000350034 POLR2KP53803 58 aaKnown RBP5.05□□□□□ -1.6
TRIM55-203ENST00000350034 LAGE3Q14657 143 aa5.05□□□□□ -1.6
TRIM55-203ENST00000350034 MAJINQ3KP22 176 aa5.05□□□□□ -1.6
TRIM55-203ENST00000350034 SUMO4Q6EEV6 95 aa5.05□□□□□ -1.6
TRIM55-203ENST00000350034 ZNF705AQ6ZN79 300 aaPredicted RBP5.05□□□□□ -1.6
TRIM55-203ENST00000350034 MRPL52Q86TS9 123 aaKnown RBP5.05□□□□□ -1.6
TRIM55-203ENST00000350034 ATOH7Q8N100 152 aa5.05□□□□□ -1.6
TRIM55-203ENST00000350034 LINC00482Q8N8I6 264 aa5.05□□□□□ -1.6
TRIM55-203ENST00000350034 C11orf72Q8NBR9 251 aa5.05□□□□□ -1.6
TRIM55-203ENST00000350034 TMEM158Q8WZ71 300 aa5.05□□□□□ -1.6
TRIM55-203ENST00000350034 RPL39LQ96EH5 51 aaKnown RBP5.05□□□□□ -1.6
TRIM55-203ENST00000350034 EDA2RQ9HAV5 297 aa5.05□□□□□ -1.6
TRIM55-203ENST00000350034 ST20Q9HBF5 79 aa5.05□□□□□ -1.6
TRIM55-203ENST00000350034 ZANQ9Y493 2812 aa5.05□□□□□ -1.6
TRIM55-203ENST00000350034 A0A087WWL8 130 aa5.04□□□□□ -1.6
TRIM55-203ENST00000350034 M0QY20 66 aa5.04□□□□□ -1.6
TRIM55-203ENST00000350034 TCAPO15273 167 aa5.04□□□□□ -1.6
TRIM55-203ENST00000350034 SAP30O75446 220 aa5.04□□□□□ -1.6
TRIM55-203ENST00000350034 ATP5LO75964 103 aa5.04□□□□□ -1.6
TRIM55-203ENST00000350034 INSP01308 110 aa5.04□□□□□ -1.6
TRIM55-203ENST00000350034 SMIM17P0DL12 118 aa5.04□□□□□ -1.6
TRIM55-203ENST00000350034 NSUN5P1Q3KNT7 163 aa5.04□□□□□ -1.6
TRIM55-203ENST00000350034 UFSP1Q6NVU6 142 aa5.04□□□□□ -1.6
TRIM55-203ENST00000350034 MORN3Q6PF18 240 aaPredicted RBP5.04□□□□□ -1.6
TRIM55-203ENST00000350034 C1orf158Q8N1D5 194 aa5.04□□□□□ -1.6
TRIM55-203ENST00000350034 IL17DQ8TAD2 202 aa5.04□□□□□ -1.6
TRIM55-203ENST00000350034 MCRIP2Q9BUT9 160 aaKnown RBP5.04□□□□□ -1.6
TRIM55-203ENST00000350034 ZMAT4Q9H898 229 aa5.04□□□□□ -1.6
TRIM55-203ENST00000350034 UQCR10Q9UDW1 63 aa5.04□□□□□ -1.6
TRIM55-203ENST00000350034 VPS13CQ709C8 3753 aa5.04□□□□□ -1.6
TRIM55-203ENST00000350034 MUC4Q99102 2169 aa5.04□□□□□ -1.6
TRIM55-203ENST00000350034 MAP1AP78559 2803 aaPredicted RBP5.03□□□□□ -1.6
TRIM55-203ENST00000350034 hDV102S1A0JD36 115 aa5.03□□□□□ -1.6
TRIM55-203ENST00000350034 M0R2P5 195 aa5.03□□□□□ -1.6
TRIM55-203ENST00000350034 GIG44P09565 113 aaPredicted RBP5.03□□□□□ -1.6
TRIM55-203ENST00000350034 ZNF415Q09FC8 603 aa5.03□□□□□ -1.6
TRIM55-203ENST00000350034 ZNF876PQ49A33 203 aa5.03□□□□□ -1.6
TRIM55-203ENST00000350034 ORMDL2Q53FV1 153 aa5.03□□□□□ -1.6
TRIM55-203ENST00000350034 STHQ8IWL8 128 aa5.03□□□□□ -1.6
TRIM55-203ENST00000350034 TOMM6Q96B49 74 aa5.03□□□□□ -1.6
TRIM55-203ENST00000350034 C2orf88Q9BSF0 95 aa5.03□□□□□ -1.6
TRIM55-203ENST00000350034 SPXQ9BT56 116 aa5.03□□□□□ -1.6
TRIM55-203ENST00000350034 CSTL1Q9H114 145 aa5.03□□□□□ -1.6
TRIM55-203ENST00000350034 HIVEP2P31629 2446 aa5.02□□□□□ -1.61
TRIM55-203ENST00000350034 AGRNO00468 2067 aa5.02□□□□□ -1.61
TRIM55-203ENST00000350034 TRBV27A0A0K0K1C4 114 aa5.02□□□□□ -1.61
TRIM55-203ENST00000350034 A8MWV9 139 aa5.02□□□□□ -1.61
TRIM55-203ENST00000350034 VCYO14598 125 aa5.02□□□□□ -1.61
TRIM55-203ENST00000350034 ODF1Q14990 250 aa5.02□□□□□ -1.61
TRIM55-203ENST00000350034 LBHQ53QV2 105 aaPredicted RBP5.02□□□□□ -1.61
TRIM55-203ENST00000350034 LINC01587Q99440 93 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms