RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 COX6B1P14854 86 aa11.53□□□□□ -0.56
TNFSF13-202ENST00000349228 EDN2P20800 178 aa11.53□□□□□ -0.56
TNFSF13-202ENST00000349228 Q6YL49 198 aa11.53□□□□□ -0.56
TNFSF13-202ENST00000349228 CHD8Q9HCK8 2581 aa11.52□□□□□ -0.56
TNFSF13-202ENST00000349228 TRBV27A0A0K0K1C4 114 aa11.52□□□□□ -0.56
TNFSF13-202ENST00000349228 ZFP2Q6ZN57 461 aa11.52□□□□□ -0.56
TNFSF13-202ENST00000349228 PHLDA1Q8WV24 401 aaPredicted RBP11.52□□□□□ -0.56
TNFSF13-202ENST00000349228 TIMM17AQ99595 171 aa11.52□□□□□ -0.56
TNFSF13-202ENST00000349228 IGHV1OR15-1A0A075B7D0 117 aa11.52□□□□□ -0.57
TNFSF13-202ENST00000349228 RIPPLY3P57055 190 aa11.52□□□□□ -0.57
TNFSF13-202ENST00000349228 FOXI2Q6ZQN5 318 aa11.52□□□□□ -0.57
TNFSF13-202ENST00000349228 HIST1H4GQ99525 98 aa11.52□□□□□ -0.57
TNFSF13-202ENST00000349228 PIEZO1Q92508 2521 aa11.52□□□□□ -0.57
TNFSF13-202ENST00000349228 ITPR1Q14643 2758 aa11.51□□□□□ -0.57
TNFSF13-202ENST00000349228 IGIPA6NJ69 53 aa11.51□□□□□ -0.57
TNFSF13-202ENST00000349228 F5H697 171 aa11.51□□□□□ -0.57
TNFSF13-202ENST00000349228 MTURNQ8N3F0 131 aa11.51□□□□□ -0.57
TNFSF13-202ENST00000349228 SYNJ2BPP57105 145 aa11.5□□□□□ -0.57
TNFSF13-202ENST00000349228 HERVK_113P61574 105 aa11.5□□□□□ -0.57
TNFSF13-202ENST00000349228 PMVKQ15126 192 aa11.5□□□□□ -0.57
TNFSF13-202ENST00000349228 NHP2Q9NX24 153 aaKnown RBP11.5□□□□□ -0.57
TNFSF13-202ENST00000349228 TRGV11A0A075B6L2 103 aa11.5□□□□□ -0.57
TNFSF13-202ENST00000349228 TSPAN13O95857 204 aa11.5□□□□□ -0.57
TNFSF13-202ENST00000349228 C10orf99Q6UWK7 81 aa11.5□□□□□ -0.57
TNFSF13-202ENST00000349228 NRGNQ92686 78 aa11.5□□□□□ -0.57
TNFSF13-202ENST00000349228 ZNF702PQ9H963 129 aa11.5□□□□□ -0.57
TNFSF13-202ENST00000349228 TRBV7-3A0A075B6L6 115 aa11.49□□□□□ -0.57
TNFSF13-202ENST00000349228 SDHAF1A6NFY7 115 aa11.49□□□□□ -0.57
TNFSF13-202ENST00000349228 M0QXV9 152 aa11.49□□□□□ -0.57
TNFSF13-202ENST00000349228 RHOHQ15669 191 aa11.49□□□□□ -0.57
TNFSF13-202ENST00000349228 TRPT1Q86TN4 253 aaKnown RBP11.49□□□□□ -0.57
TNFSF13-202ENST00000349228 TP53TG1Q9Y2A0 90 aa11.49□□□□□ -0.57
TNFSF13-202ENST00000349228 A0A087WWL8 130 aa11.48□□□□□ -0.57
TNFSF13-202ENST00000349228 TRAV2A0A0B4J234 112 aa11.48□□□□□ -0.57
TNFSF13-202ENST00000349228 A0A1B0GWB2 263 aa11.48□□□□□ -0.57
TNFSF13-202ENST00000349228 HOXD3P31249 432 aaPredicted RBP11.48□□□□□ -0.57
TNFSF13-202ENST00000349228 Q8N1Y9 231 aa11.48□□□□□ -0.57
TNFSF13-202ENST00000349228 PRADC1Q9BSG0 188 aa11.48□□□□□ -0.57
TNFSF13-202ENST00000349228 JPT2Q9H910 190 aa11.48□□□□□ -0.57
TNFSF13-202ENST00000349228 SELENOKQ9Y6D0 94 aa11.48□□□□□ -0.57
TNFSF13-202ENST00000349228 C12orf74Q32Q52 190 aa11.48□□□□□ -0.57
TNFSF13-202ENST00000349228 NAA38Q9BRA0 125 aaKnown RBP11.48□□□□□ -0.57
TNFSF13-202ENST00000349228 ZNF256Q9Y2P7 627 aaPredicted RBP11.48□□□□□ -0.57
TNFSF13-202ENST00000349228 DOPEY1Q5JWR5 2465 aa11.48□□□□□ -0.57
TNFSF13-202ENST00000349228 CSMD1Q96PZ7 3565 aa11.47□□□□□ -0.57
TNFSF13-202ENST00000349228 M0QY20 66 aa11.47□□□□□ -0.57
TNFSF13-202ENST00000349228 CRYGDP07320 174 aa11.47□□□□□ -0.57
TNFSF13-202ENST00000349228 BEX4Q9NWD9 120 aaPredicted RBP11.47□□□□□ -0.57
TNFSF13-202ENST00000349228 MDFICQ9P1T7 246 aa11.47□□□□□ -0.57
TNFSF13-202ENST00000349228 TSSC4Q9Y5U2 329 aaPredicted RBP11.47□□□□□ -0.57
TNFSF13-202ENST00000349228 IGLL5B9A064 214 aa11.47□□□□□ -0.57
TNFSF13-202ENST00000349228 IGHV4-31P0DP07 118 aa11.47□□□□□ -0.57
TNFSF13-202ENST00000349228 NSUN5P1Q3KNT7 163 aa11.47□□□□□ -0.57
TNFSF13-202ENST00000349228 AMTNQ6UX39 209 aa11.47□□□□□ -0.57
TNFSF13-202ENST00000349228 NEGR1Q7Z3B1 354 aa11.47□□□□□ -0.57
TNFSF13-202ENST00000349228 DUX5Q96PT3 197 aa11.47□□□□□ -0.57
TNFSF13-202ENST00000349228 SPTAN1Q13813 2472 aaKnown RBP11.46□□□□□ -0.57
TNFSF13-202ENST00000349228 PKD1L2Q7Z442 2459 aa11.46□□□□□ -0.57
TNFSF13-202ENST00000349228 TSHBP01222 138 aa11.46□□□□□ -0.57
TNFSF13-202ENST00000349228 LRRC75A-AS1Q8N1F1 130 aa11.46□□□□□ -0.57
TNFSF13-202ENST00000349228 Q8N2B8 174 aa11.46□□□□□ -0.57
TNFSF13-202ENST00000349228 EDA2RQ9HAV5 297 aa11.46□□□□□ -0.57
TNFSF13-202ENST00000349228 TRAV12-2A0A075B6T6 113 aa11.45□□□□□ -0.58
TNFSF13-202ENST00000349228 A8MTW9 85 aa11.45□□□□□ -0.58
TNFSF13-202ENST00000349228 IGKV3-20P01619 116 aa11.45□□□□□ -0.58
TNFSF13-202ENST00000349228 ZNF56Q15929 161 aa11.45□□□□□ -0.58
TNFSF13-202ENST00000349228 SPINK13Q1W4C9 94 aa11.45□□□□□ -0.58
TNFSF13-202ENST00000349228 TCTEX1D4Q5JR98 221 aa11.45□□□□□ -0.58
TNFSF13-202ENST00000349228 ASH1LQ9NR48 2969 aaKnown RBP11.45□□□□□ -0.58
TNFSF13-202ENST00000349228 IGLV4-69A0A075B6H9 119 aa11.45□□□□□ -0.58
TNFSF13-202ENST00000349228 C11orf86A6NJI1 115 aa11.45□□□□□ -0.58
TNFSF13-202ENST00000349228 ZNF815PA8K554 130 aa11.45□□□□□ -0.58
TNFSF13-202ENST00000349228 K7ERJ3 54 aa11.44□□□□□ -0.58
TNFSF13-202ENST00000349228 PIK3CD-AS1Q5SR53 167 aa11.44□□□□□ -0.58
TNFSF13-202ENST00000349228 FAM74A4Q5TZK3 123 aa11.44□□□□□ -0.58
TNFSF13-202ENST00000349228 RAX2Q96IS3 184 aa11.44□□□□□ -0.58
TNFSF13-202ENST00000349228 MUC4Q99102 2169 aa11.44□□□□□ -0.58
TNFSF13-202ENST00000349228 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.44□□□□□ -0.58
TNFSF13-202ENST00000349228 ZNF876PQ49A33 203 aa11.43□□□□□ -0.58
TNFSF13-202ENST00000349228 PEMTQ9UBM1 199 aa11.43□□□□□ -0.58
TNFSF13-202ENST00000349228 I3L3M4 83 aa11.43□□□□□ -0.58
TNFSF13-202ENST00000349228 HOXA3O43365 443 aaPredicted RBP11.43□□□□□ -0.58
TNFSF13-202ENST00000349228 SCGB1D4Q6XE38 83 aa11.43□□□□□ -0.58
TNFSF13-202ENST00000349228 PTH2Q96A98 100 aa11.43□□□□□ -0.58
TNFSF13-202ENST00000349228 RRN3P1Q2M238 152 aa11.42□□□□□ -0.58
TNFSF13-202ENST00000349228 NFE4Q86UQ8 179 aa11.42□□□□□ -0.58
TNFSF13-202ENST00000349228 F8W1H4 67 aa11.42□□□□□ -0.58
TNFSF13-202ENST00000349228 G3V4G9 280 aa11.42□□□□□ -0.58
TNFSF13-202ENST00000349228 PF4P02776 101 aa11.42□□□□□ -0.58
TNFSF13-202ENST00000349228 RPL39P62891 51 aaKnown RBP11.42□□□□□ -0.58
TNFSF13-202ENST00000349228 CD300EQ496F6 205 aaPredicted RBP11.42□□□□□ -0.58
TNFSF13-202ENST00000349228 OXLD1Q5BKU9 147 aa11.42□□□□□ -0.58
TNFSF13-202ENST00000349228 MORN3Q6PF18 240 aaPredicted RBP11.42□□□□□ -0.58
TNFSF13-202ENST00000349228 DEFB113Q30KQ7 82 aa11.41□□□□□ -0.58
TNFSF13-202ENST00000349228 MAPK1IP1LQ8NDC0 245 aa11.4□□□□□ -0.58
TNFSF13-202ENST00000349228 CACNA1AO00555 2505 aa11.4□□□□□ -0.58
TNFSF13-202ENST00000349228 SRSF9Q13242 221 aaKnown RBP eCLIP11.4□□□□□ -0.59
TNFSF13-202ENST00000349228 TEX29Q8N6K0 151 aa11.4□□□□□ -0.59
TNFSF13-202ENST00000349228 C20orf203Q8NBC4 194 aa11.4□□□□□ -0.59
TNFSF13-202ENST00000349228 C4orf3Q8WVX3 66 aa11.4□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms