RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 FANCD2OSQ96PS1 177 aa11.55□□□□□ -0.56
PTBP1-201ENST00000349038 SPXQ9BT56 116 aa11.55□□□□□ -0.56
PTBP1-201ENST00000349038 IGFL3Q6UXB1 125 aa11.55□□□□□ -0.56
PTBP1-201ENST00000349038 YAE1D1Q9NRH1 226 aa11.55□□□□□ -0.56
PTBP1-201ENST00000349038 FAM236AA0A1B0GUQ0 79 aa11.55□□□□□ -0.56
PTBP1-201ENST00000349038 FAM236BA0A1B0GV22 79 aa11.55□□□□□ -0.56
PTBP1-201ENST00000349038 PRR9Q5T870 116 aa11.55□□□□□ -0.56
PTBP1-201ENST00000349038 COX8CQ7Z4L0 72 aa11.55□□□□□ -0.56
PTBP1-201ENST00000349038 SETD2Q9BYW2 2564 aaPredicted RBP11.54□□□□□ -0.56
PTBP1-201ENST00000349038 H3BMM0 161 aa11.54□□□□□ -0.56
PTBP1-201ENST00000349038 J3QQQ9 107 aa11.54□□□□□ -0.56
PTBP1-201ENST00000349038 ZNF22P17026 224 aaPredicted RBP11.54□□□□□ -0.56
PTBP1-201ENST00000349038 LINC01620Q4KN68 170 aa11.54□□□□□ -0.56
PTBP1-201ENST00000349038 UBE2WQ96B02 151 aa11.54□□□□□ -0.56
PTBP1-201ENST00000349038 FAM110AQ9BQ89 295 aa11.54□□□□□ -0.56
PTBP1-201ENST00000349038 OOSP1A8MZH6 123 aa11.54□□□□□ -0.56
PTBP1-201ENST00000349038 CTSGP08311 255 aa11.54□□□□□ -0.56
PTBP1-201ENST00000349038 RAB1BQ9H0U4 201 aa11.54□□□□□ -0.56
PTBP1-201ENST00000349038 VCX2Q9H322 139 aa11.54□□□□□ -0.56
PTBP1-201ENST00000349038 IGHV7-4-1A0A0J9YVY3 117 aa11.53□□□□□ -0.56
PTBP1-201ENST00000349038 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.53□□□□□ -0.56
PTBP1-201ENST00000349038 Q6ZS92 163 aa11.53□□□□□ -0.56
PTBP1-201ENST00000349038 IGHV3-30P01768 117 aa11.53□□□□□ -0.56
PTBP1-201ENST00000349038 IGHV3-30-5P0DP03 117 aa11.53□□□□□ -0.56
PTBP1-201ENST00000349038 TRGV11A0A075B6L2 103 aa11.53□□□□□ -0.56
PTBP1-201ENST00000349038 A8MZ25 164 aa11.53□□□□□ -0.56
PTBP1-201ENST00000349038 RNASE6Q93091 150 aaKnown RBP11.53□□□□□ -0.56
PTBP1-201ENST00000349038 G3V318 75 aa11.52□□□□□ -0.57
PTBP1-201ENST00000349038 TOMM6Q96B49 74 aa11.52□□□□□ -0.57
PTBP1-201ENST00000349038 PRRC2AP48634 2157 aaKnown RBP11.52□□□□□ -0.57
PTBP1-201ENST00000349038 LINC01559Q495D7 138 aa11.52□□□□□ -0.57
PTBP1-201ENST00000349038 DUX5Q96PT3 197 aa11.52□□□□□ -0.57
PTBP1-201ENST00000349038 ODF3Q96PU9 254 aa11.52□□□□□ -0.57
PTBP1-201ENST00000349038 RNF5Q99942 180 aa11.52□□□□□ -0.57
PTBP1-201ENST00000349038 MSRB2Q9Y3D2 182 aa11.52□□□□□ -0.57
PTBP1-201ENST00000349038 LINC01546A6NGU7 62 aa11.51□□□□□ -0.57
PTBP1-201ENST00000349038 LINC00694P0DN24 101 aa11.51□□□□□ -0.57
PTBP1-201ENST00000349038 PMVKQ15126 192 aa11.51□□□□□ -0.57
PTBP1-201ENST00000349038 C9orf153Q5TBE3 101 aa11.51□□□□□ -0.57
PTBP1-201ENST00000349038 CEMP1Q6PRD7 247 aaPredicted RBP11.51□□□□□ -0.57
PTBP1-201ENST00000349038 ZNF625Q96I27 306 aaPredicted RBP11.51□□□□□ -0.57
PTBP1-201ENST00000349038 UBTD1Q9HAC8 227 aa11.51□□□□□ -0.57
PTBP1-201ENST00000349038 TRAV41A0A0B4J266 112 aa11.5□□□□□ -0.57
PTBP1-201ENST00000349038 LY6LH3BQJ8 138 aa11.5□□□□□ -0.57
PTBP1-201ENST00000349038 ATXN8Q156A1 80 aa11.5□□□□□ -0.57
PTBP1-201ENST00000349038 ZNRF2Q8NHG8 242 aa11.5□□□□□ -0.57
PTBP1-201ENST00000349038 PSMG3-AS1Q96PY0 264 aa11.5□□□□□ -0.57
PTBP1-201ENST00000349038 A0A0G2JNJ9 132 aa11.5□□□□□ -0.57
PTBP1-201ENST00000349038 IGHV3-33P01772 117 aa11.5□□□□□ -0.57
PTBP1-201ENST00000349038 CRYGDP07320 174 aa11.5□□□□□ -0.57
PTBP1-201ENST00000349038 Q9UFV3 132 aa11.5□□□□□ -0.57
PTBP1-201ENST00000349038 CACNA1AO00555 2505 aa11.49□□□□□ -0.57
PTBP1-201ENST00000349038 IGHV3-73A0A0B4J1V6 119 aa11.49□□□□□ -0.57
PTBP1-201ENST00000349038 F8W735 103 aaPredicted RBP11.49□□□□□ -0.57
PTBP1-201ENST00000349038 OR10J6PQ8NGY7 276 aa11.49□□□□□ -0.57
PTBP1-201ENST00000349038 VPREB3Q9UKI3 123 aa11.49□□□□□ -0.57
PTBP1-201ENST00000349038 TRIAP1O43715 76 aa11.49□□□□□ -0.57
PTBP1-201ENST00000349038 TRAV12-1A0A0B4J245 112 aa11.49□□□□□ -0.57
PTBP1-201ENST00000349038 DEFB124Q8NES8 71 aa11.49□□□□□ -0.57
PTBP1-201ENST00000349038 DPH3P1Q9H4G8 78 aa11.49□□□□□ -0.57
PTBP1-201ENST00000349038 ASIPP42127 132 aa11.48□□□□□ -0.57
PTBP1-201ENST00000349038 A0A0J9YXV3 536 aa11.48□□□□□ -0.57
PTBP1-201ENST00000349038 COX6B1P14854 86 aa11.48□□□□□ -0.57
PTBP1-201ENST00000349038 KLRB1Q12918 225 aa11.48□□□□□ -0.57
PTBP1-201ENST00000349038 SLC50A1Q9BRV3 221 aa11.48□□□□□ -0.57
PTBP1-201ENST00000349038 DPM3Q9P2X0 92 aa11.48□□□□□ -0.57
PTBP1-201ENST00000349038 UBE2E1P51965 193 aa11.47□□□□□ -0.57
PTBP1-201ENST00000349038 SLC25A29Q8N8R3 303 aa11.47□□□□□ -0.57
PTBP1-201ENST00000349038 EDA2RQ9HAV5 297 aa11.47□□□□□ -0.57
PTBP1-201ENST00000349038 IGHV3OR16-10A0A075B7F0 116 aa11.47□□□□□ -0.57
PTBP1-201ENST00000349038 IGLV11-55A0A075B6I3 123 aa11.47□□□□□ -0.57
PTBP1-201ENST00000349038 EIF4EBP3O60516 100 aaPredicted RBP11.47□□□□□ -0.57
PTBP1-201ENST00000349038 IGHV3-11P01762 117 aa11.47□□□□□ -0.57
PTBP1-201ENST00000349038 SRSF2Q01130 221 aaKnown RBP11.47□□□□□ -0.57
PTBP1-201ENST00000349038 CNFNQ9BYD5 112 aa11.47□□□□□ -0.57
PTBP1-201ENST00000349038 E7EQL1 145 aa11.46□□□□□ -0.57
PTBP1-201ENST00000349038 TSHBP01222 138 aa11.46□□□□□ -0.57
PTBP1-201ENST00000349038 IGF2-ASQ6U949 168 aa11.46□□□□□ -0.57
PTBP1-201ENST00000349038 IGLV4-69A0A075B6H9 119 aa11.46□□□□□ -0.58
PTBP1-201ENST00000349038 SDHAF1A6NFY7 115 aa11.46□□□□□ -0.58
PTBP1-201ENST00000349038 BUB3O43684 328 aa11.46□□□□□ -0.58
PTBP1-201ENST00000349038 SPTBN4Q9H254 2564 aa11.45□□□□□ -0.58
PTBP1-201ENST00000349038 RPL13AP40429 203 aaKnown RBP11.45□□□□□ -0.58
PTBP1-201ENST00000349038 PTPN13Q12923 2485 aa11.45□□□□□ -0.58
PTBP1-201ENST00000349038 METTL26Q96S19 204 aa11.44□□□□□ -0.58
PTBP1-201ENST00000349038 TNFRSF18Q9Y5U5 241 aa11.44□□□□□ -0.58
PTBP1-201ENST00000349038 MYO9AB2RTY4 2548 aa11.44□□□□□ -0.58
PTBP1-201ENST00000349038 CLPSL1A2RUU4 121 aa11.44□□□□□ -0.58
PTBP1-201ENST00000349038 NPBQ8NG41 125 aa11.44□□□□□ -0.58
PTBP1-201ENST00000349038 LINC01560Q8TB33 94 aa11.44□□□□□ -0.58
PTBP1-201ENST00000349038 COX6CP09669 75 aa11.43□□□□□ -0.58
PTBP1-201ENST00000349038 ZFHX3Q15911 3703 aa11.43□□□□□ -0.58
PTBP1-201ENST00000349038 CD3EP07766 207 aa11.42□□□□□ -0.58
PTBP1-201ENST00000349038 TMEM219Q86XT9 240 aa11.42□□□□□ -0.58
PTBP1-201ENST00000349038 MUC4Q99102 2169 aa11.42□□□□□ -0.58
PTBP1-201ENST00000349038 ZNF672Q499Z4 452 aaPredicted RBP11.42□□□□□ -0.58
PTBP1-201ENST00000349038 CENPVL3A0A0U1RRI6 287 aa11.42□□□□□ -0.58
PTBP1-201ENST00000349038 LGALS9O00182 355 aa11.42□□□□□ -0.58
PTBP1-201ENST00000349038 NSUN5P1Q3KNT7 163 aa11.42□□□□□ -0.58
PTBP1-201ENST00000349038 M0R2P5 195 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms