RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 FAM231CP0DMU5 169 aa8.66□□□□□ -1.02
SMARCE1-202ENST00000348513 PLXNA2O75051 1894 aa8.66□□□□□ -1.02
SMARCE1-202ENST00000348513 IGHV4-59P01825 116 aa8.66□□□□□ -1.02
SMARCE1-202ENST00000348513 PDE6HQ13956 83 aa8.66□□□□□ -1.02
SMARCE1-202ENST00000348513 DEFB112Q30KQ8 113 aa8.66□□□□□ -1.02
SMARCE1-202ENST00000348513 HOXB4P17483 251 aaPredicted RBP8.66□□□□□ -1.02
SMARCE1-202ENST00000348513 DYNAPQ8N1N2 210 aa8.66□□□□□ -1.02
SMARCE1-202ENST00000348513 ABCA1O95477 2261 aa8.65□□□□□ -1.02
SMARCE1-202ENST00000348513 DEFB136Q30KP8 78 aa8.65□□□□□ -1.02
SMARCE1-202ENST00000348513 SPRY4Q9C004 299 aa8.65□□□□□ -1.02
SMARCE1-202ENST00000348513 PCNX1Q96RV3 2341 aa8.65□□□□□ -1.02
SMARCE1-202ENST00000348513 KLK5Q9Y337 293 aaPredicted RBP8.65□□□□□ -1.03
SMARCE1-202ENST00000348513 KIR2DL5BQ8NHK3 375 aa8.65□□□□□ -1.03
SMARCE1-202ENST00000348513 FRMD6-AS1P0C7T7 363 aa8.64□□□□□ -1.03
SMARCE1-202ENST00000348513 CTSZQ9UBR2 303 aa8.64□□□□□ -1.03
SMARCE1-202ENST00000348513 FOXE3Q13461 319 aa8.64□□□□□ -1.03
SMARCE1-202ENST00000348513 NDUFA4O00483 81 aa8.64□□□□□ -1.03
SMARCE1-202ENST00000348513 ZNRF2Q8NHG8 242 aa8.63□□□□□ -1.03
SMARCE1-202ENST00000348513 USP17L23D6RBM5 183 aa8.63□□□□□ -1.03
SMARCE1-202ENST00000348513 H3BRN7 92 aa8.63□□□□□ -1.03
SMARCE1-202ENST00000348513 Q8N976 141 aa8.63□□□□□ -1.03
SMARCE1-202ENST00000348513 CLPSL2Q6UWE3 100 aa8.63□□□□□ -1.03
SMARCE1-202ENST00000348513 BLCAPP62952 87 aa8.62□□□□□ -1.03
SMARCE1-202ENST00000348513 TMEM61Q8N0U2 210 aa8.62□□□□□ -1.03
SMARCE1-202ENST00000348513 H0YGX0 51 aa8.62□□□□□ -1.03
SMARCE1-202ENST00000348513 LINC00311Q8N616 119 aa8.62□□□□□ -1.03
SMARCE1-202ENST00000348513 JMJD7-PLA2G4BH0Y9G9 81 aa8.62□□□□□ -1.03
SMARCE1-202ENST00000348513 C17orf77Q96MU5 243 aa8.62□□□□□ -1.03
SMARCE1-202ENST00000348513 TMEM89A2RUT3 159 aa8.62□□□□□ -1.03
SMARCE1-202ENST00000348513 NDUFS5O43920 106 aa8.62□□□□□ -1.03
SMARCE1-202ENST00000348513 NXPH4O95158 308 aa8.62□□□□□ -1.03
SMARCE1-202ENST00000348513 IGHV4-30-2A0A087WSY4 118 aa8.62□□□□□ -1.03
SMARCE1-202ENST00000348513 ZNF561-AS1K7EIQ3 104 aa8.62□□□□□ -1.03
SMARCE1-202ENST00000348513 IGHV4-38-2P0DP08 117 aa8.62□□□□□ -1.03
SMARCE1-202ENST00000348513 CDIP1Q9H305 208 aa8.62□□□□□ -1.03
SMARCE1-202ENST00000348513 IGHV4-61A0A0C4DH41 118 aa8.61□□□□□ -1.03
SMARCE1-202ENST00000348513 PROP1O75360 226 aa8.61□□□□□ -1.03
SMARCE1-202ENST00000348513 MP68P56378 58 aa8.61□□□□□ -1.03
SMARCE1-202ENST00000348513 MDFICQ9P1T7 246 aa8.61□□□□□ -1.03
SMARCE1-202ENST00000348513 CACNA1HO95180 2353 aa8.61□□□□□ -1.03
SMARCE1-202ENST00000348513 IGHV7-4-1A0A0J9YVY3 117 aa8.61□□□□□ -1.03
SMARCE1-202ENST00000348513 CDK2AP2O75956 126 aa8.61□□□□□ -1.03
SMARCE1-202ENST00000348513 APOC4P55056 127 aa8.61□□□□□ -1.03
SMARCE1-202ENST00000348513 RNASE13Q5GAN3 156 aaKnown RBP8.61□□□□□ -1.03
SMARCE1-202ENST00000348513 PRR25Q96S07 402 aa8.6□□□□□ -1.03
SMARCE1-202ENST00000348513 I3L3M4 83 aa8.6□□□□□ -1.03
SMARCE1-202ENST00000348513 SPRY2O43597 315 aa8.6□□□□□ -1.03
SMARCE1-202ENST00000348513 FXYD5Q96DB9 178 aa8.6□□□□□ -1.03
SMARCE1-202ENST00000348513 ZFHX2Q9C0A1 2572 aaPredicted RBP8.6□□□□□ -1.03
SMARCE1-202ENST00000348513 A0A0J9YY99 117 aa8.6□□□□□ -1.03
SMARCE1-202ENST00000348513 CGB3P0DN86 165 aa8.6□□□□□ -1.03
SMARCE1-202ENST00000348513 C11orf53Q8IXP5 236 aa8.6□□□□□ -1.03
SMARCE1-202ENST00000348513 F8WEM9 126 aa8.6□□□□□ -1.03
SMARCE1-202ENST00000348513 C14orf132Q9NPU4 83 aa8.6□□□□□ -1.03
SMARCE1-202ENST00000348513 SDHAF1A6NFY7 115 aa8.59□□□□□ -1.03
SMARCE1-202ENST00000348513 IGLV2-23P01705 113 aa8.59□□□□□ -1.03
SMARCE1-202ENST00000348513 DEFB113Q30KQ7 82 aa8.59□□□□□ -1.03
SMARCE1-202ENST00000348513 SNURFQ9Y675 71 aa8.59□□□□□ -1.03
SMARCE1-202ENST00000348513 KIF26AQ9ULI4 1882 aaPredicted RBP8.59□□□□□ -1.03
SMARCE1-202ENST00000348513 EDN2P20800 178 aa8.59□□□□□ -1.03
SMARCE1-202ENST00000348513 Q6ZQT7 251 aa8.58□□□□□ -1.04
SMARCE1-202ENST00000348513 APRG1Q8IVJ8 170 aa8.58□□□□□ -1.04
SMARCE1-202ENST00000348513 RITA1Q96K30 269 aa8.58□□□□□ -1.04
SMARCE1-202ENST00000348513 NOTCH3Q9UM47 2321 aa8.58□□□□□ -1.04
SMARCE1-202ENST00000348513 HOXD3P31249 432 aaPredicted RBP8.58□□□□□ -1.04
SMARCE1-202ENST00000348513 SLURP1P55000 103 aa8.58□□□□□ -1.04
SMARCE1-202ENST00000348513 SERTAD4-AS1Q5TG53 156 aa8.58□□□□□ -1.04
SMARCE1-202ENST00000348513 ZGRF1Q86YA3 2104 aa8.58□□□□□ -1.04
SMARCE1-202ENST00000348513 TMEM14CQ9P0S9 112 aa8.58□□□□□ -1.04
SMARCE1-202ENST00000348513 A6NED7 52 aa8.58□□□□□ -1.04
SMARCE1-202ENST00000348513 DAZ2Q13117 558 aaKnown RBP8.58□□□□□ -1.04
SMARCE1-202ENST00000348513 DAZ4Q86SG3 579 aaKnown RBP8.58□□□□□ -1.04
SMARCE1-202ENST00000348513 TIMM17AQ99595 171 aa8.58□□□□□ -1.04
SMARCE1-202ENST00000348513 FGF23Q9GZV9 251 aaPredicted RBP8.58□□□□□ -1.04
SMARCE1-202ENST00000348513 NOP10Q9NPE3 64 aaKnown RBP8.58□□□□□ -1.04
SMARCE1-202ENST00000348513 DAZ3Q9NR90 486 aaKnown RBP8.58□□□□□ -1.04
SMARCE1-202ENST00000348513 KAAG1Q9UBP8 84 aa8.58□□□□□ -1.04
SMARCE1-202ENST00000348513 PYGO1Q9Y3Y4 419 aa8.58□□□□□ -1.04
SMARCE1-202ENST00000348513 C11orf86A6NJI1 115 aa8.58□□□□□ -1.04
SMARCE1-202ENST00000348513 CCL24O00175 119 aa8.58□□□□□ -1.04
SMARCE1-202ENST00000348513 WIPF1O43516 503 aa8.58□□□□□ -1.04
SMARCE1-202ENST00000348513 CHKB-CPT1BH3BT56 60 aa8.57□□□□□ -1.04
SMARCE1-202ENST00000348513 GNRH2O43555 120 aa8.57□□□□□ -1.04
SMARCE1-202ENST00000348513 HIST2H2BCQ6DN03 193 aa8.57□□□□□ -1.04
SMARCE1-202ENST00000348513 HIST2H2BDQ6DRA6 164 aa8.57□□□□□ -1.04
SMARCE1-202ENST00000348513 ENHOQ6UWT2 76 aa8.57□□□□□ -1.04
SMARCE1-202ENST00000348513 GATA1P15976 413 aaPredicted RBP8.57□□□□□ -1.04
SMARCE1-202ENST00000348513 TOMM6Q96B49 74 aa8.57□□□□□ -1.04
SMARCE1-202ENST00000348513 TRBV30A0A0K0K1B3 111 aa8.57□□□□□ -1.04
SMARCE1-202ENST00000348513 IGLV3-1P01715 115 aa8.57□□□□□ -1.04
SMARCE1-202ENST00000348513 ADORA2A-AS1P86434 159 aa8.57□□□□□ -1.04
SMARCE1-202ENST00000348513 THAP8Q8NA92 274 aa8.57□□□□□ -1.04
SMARCE1-202ENST00000348513 AJUBAQ96IF1 538 aa8.57□□□□□ -1.04
SMARCE1-202ENST00000348513 C9orf85Q96MD7 179 aa8.57□□□□□ -1.04
SMARCE1-202ENST00000348513 DKK4Q9UBT3 224 aa8.57□□□□□ -1.04
SMARCE1-202ENST00000348513 GTF3C1Q12789 2109 aa8.57□□□□□ -1.04
SMARCE1-202ENST00000348513 DOCK11Q5JSL3 2073 aa8.57□□□□□ -1.04
SMARCE1-202ENST00000348513 NUP210Q8TEM1 1887 aaPredicted RBP8.57□□□□□ -1.04
SMARCE1-202ENST00000348513 A0A1W2PNU3 283 aaPredicted RBP8.56□□□□□ -1.04
SMARCE1-202ENST00000348513 H3BQ85 93 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms