RNA–Protein interactions for RNA: ENST00000347613.8

CLCN3-201, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLCN3, Length 3,635 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-201ENST00000347613 NXT2Q9NPJ8 142 aaKnown RBP4.49□□□□□ -1.69
CLCN3-201ENST00000347613 MGPP08493 103 aa4.48□□□□□ -1.69
CLCN3-201ENST00000347613 ZNF688P0C7X2 276 aa4.48□□□□□ -1.69
CLCN3-201ENST00000347613 RNF151Q2KHN1 245 aa4.48□□□□□ -1.69
CLCN3-201ENST00000347613 C9orf139Q6ZV77 190 aa4.48□□□□□ -1.69
CLCN3-201ENST00000347613 KLHL30-AS1Q8NEE0 82 aa4.48□□□□□ -1.69
CLCN3-201ENST00000347613 PLEKHB2Q96CS7 222 aa4.48□□□□□ -1.69
CLCN3-201ENST00000347613 SMIM2Q9BVW6 85 aa4.48□□□□□ -1.69
CLCN3-201ENST00000347613 TENM1Q9UKZ4 2725 aa4.48□□□□□ -1.69
CLCN3-201ENST00000347613 CCDC168Q8NDH2 2452 aa4.48□□□□□ -1.69
CLCN3-201ENST00000347613 C9orf118A6NHY6 69 aa4.48□□□□□ -1.69
CLCN3-201ENST00000347613 KLLNB2CW77 178 aa4.48□□□□□ -1.69
CLCN3-201ENST00000347613 MTURNQ8N3F0 131 aa4.48□□□□□ -1.69
CLCN3-201ENST00000347613 NEXN-AS1Q8NBZ9 246 aa4.48□□□□□ -1.69
CLCN3-201ENST00000347613 ANK2Q01484 3957 aa4.48□□□□□ -1.69
CLCN3-201ENST00000347613 A0A087WX48 190 aa4.48□□□□□ -1.69
CLCN3-201ENST00000347613 GCSHP23434 173 aa4.48□□□□□ -1.69
CLCN3-201ENST00000347613 SUMO2P61956 95 aaKnown RBP4.48□□□□□ -1.69
CLCN3-201ENST00000347613 BAALCQ8WXS3 180 aa4.48□□□□□ -1.69
CLCN3-201ENST00000347613 CHAC1Q9BUX1 264 aa4.48□□□□□ -1.69
CLCN3-201ENST00000347613 ZNF580Q9UK33 172 aa4.48□□□□□ -1.69
CLCN3-201ENST00000347613 HELZ2Q9BYK8 2649 aaKnown RBP4.47□□□□□ -1.69
CLCN3-201ENST00000347613 A0A0G2JLM5 398 aa4.47□□□□□ -1.69
CLCN3-201ENST00000347613 OCIAD2Q56VL3 154 aa4.47□□□□□ -1.69
CLCN3-201ENST00000347613 FAM104AQ969W3 186 aa4.47□□□□□ -1.69
CLCN3-201ENST00000347613 IGHV4OR15-8A0A075B7B6 117 aa4.47□□□□□ -1.69
CLCN3-201ENST00000347613 A0A087WW49 117 aa4.47□□□□□ -1.69
CLCN3-201ENST00000347613 H3BRM9 83 aa4.47□□□□□ -1.69
CLCN3-201ENST00000347613 P0DMU3 169 aa4.47□□□□□ -1.69
CLCN3-201ENST00000347613 FAM231AP0DMU4 169 aa4.47□□□□□ -1.69
CLCN3-201ENST00000347613 FAM231CP0DMU5 169 aa4.47□□□□□ -1.69
CLCN3-201ENST00000347613 TSPEAR-AS2P59090 65 aa4.47□□□□□ -1.69
CLCN3-201ENST00000347613 SCGB2A2Q13296 93 aa4.47□□□□□ -1.69
CLCN3-201ENST00000347613 HIST2H2BCQ6DN03 193 aa4.47□□□□□ -1.69
CLCN3-201ENST00000347613 SUMO4Q6EEV6 95 aa4.47□□□□□ -1.69
CLCN3-201ENST00000347613 ZNF843Q8N446 348 aa4.47□□□□□ -1.69
CLCN3-201ENST00000347613 OR10J6PQ8NGY7 276 aa4.47□□□□□ -1.69
CLCN3-201ENST00000347613 TOMM6Q96B49 74 aa4.47□□□□□ -1.69
CLCN3-201ENST00000347613 BEX4Q9NWD9 120 aaPredicted RBP4.47□□□□□ -1.69
CLCN3-201ENST00000347613 PHLDA3Q9Y5J5 127 aa4.47□□□□□ -1.69
CLCN3-201ENST00000347613 IGLV4-69A0A075B6H9 119 aa4.47□□□□□ -1.69
CLCN3-201ENST00000347613 DPM2O94777 84 aa4.47□□□□□ -1.69
CLCN3-201ENST00000347613 SYNJ2BPP57105 145 aa4.47□□□□□ -1.69
CLCN3-201ENST00000347613 SPINK13Q1W4C9 94 aa4.47□□□□□ -1.69
CLCN3-201ENST00000347613 PSMG4Q5JS54 123 aa4.47□□□□□ -1.69
CLCN3-201ENST00000347613 DAZ1Q9NQZ3 744 aaKnown RBP4.47□□□□□ -1.69
CLCN3-201ENST00000347613 GCN1Q92616 2671 aaKnown RBP4.47□□□□□ -1.69
CLCN3-201ENST00000347613 TRAV21A0A0B4J279 112 aa4.46□□□□□ -1.69
CLCN3-201ENST00000347613 HSD52Q0P140 79 aa4.46□□□□□ -1.69
CLCN3-201ENST00000347613 C2orf66Q6UXQ4 117 aa4.46□□□□□ -1.69
CLCN3-201ENST00000347613 Q8N1Y9 231 aa4.46□□□□□ -1.69
CLCN3-201ENST00000347613 RBMY1BA6NDE4 496 aaKnown RBP4.46□□□□□ -1.7
CLCN3-201ENST00000347613 RBMY1EA6NEQ0 496 aaKnown RBP4.46□□□□□ -1.7
CLCN3-201ENST00000347613 RBMY1DP0C7P1 496 aaKnown RBP4.46□□□□□ -1.7
CLCN3-201ENST00000347613 S100A4P26447 101 aaKnown RBP4.46□□□□□ -1.7
CLCN3-201ENST00000347613 TCTEX1D4Q5JR98 221 aa4.46□□□□□ -1.7
CLCN3-201ENST00000347613 AMTNQ6UX39 209 aa4.46□□□□□ -1.7
CLCN3-201ENST00000347613 POM121L12Q8N7R1 296 aa4.46□□□□□ -1.7
CLCN3-201ENST00000347613 ZNRF2Q8NHG8 242 aa4.46□□□□□ -1.7
CLCN3-201ENST00000347613 USMG5Q96IX5 58 aa4.46□□□□□ -1.7
CLCN3-201ENST00000347613 NHP2Q9NX24 153 aaKnown RBP4.46□□□□□ -1.7
CLCN3-201ENST00000347613 MTORP42345 2549 aa4.46□□□□□ -1.7
CLCN3-201ENST00000347613 A0A1W2PPM0 123 aa4.46□□□□□ -1.7
CLCN3-201ENST00000347613 OVOL1O14753 267 aa4.46□□□□□ -1.7
CLCN3-201ENST00000347613 SCGB2A1O75556 95 aa4.46□□□□□ -1.7
CLCN3-201ENST00000347613 CD7P09564 240 aa4.46□□□□□ -1.7
CLCN3-201ENST00000347613 ASIPP42127 132 aa4.46□□□□□ -1.7
CLCN3-201ENST00000347613 SEC11AP67812 179 aa4.46□□□□□ -1.7
CLCN3-201ENST00000347613 Q6ZSN1 163 aa4.46□□□□□ -1.7
CLCN3-201ENST00000347613 DPH3P1Q9H4G8 78 aa4.46□□□□□ -1.7
CLCN3-201ENST00000347613 TRBV7-3A0A075B6L6 115 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 IGHV3-73A0A0B4J1V6 119 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 GAGE10A6NGK3 116 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 IGIPA6NJ69 53 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 EIF4EBP3O60516 100 aaPredicted RBP4.45□□□□□ -1.7
CLCN3-201ENST00000347613 NXPH4O95158 308 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 CRYBA4P53673 196 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 POLR2KP53803 58 aaKnown RBP4.45□□□□□ -1.7
CLCN3-201ENST00000347613 SLURP1P55000 103 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 FAM74A4Q5TZK3 123 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 CEND1Q8N111 149 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 OR9G4Q8NGQ1 327 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 SCGB3A1Q96QR1 104 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 IGHV3-16A0A0C4DH30 117 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 C11orf86A6NJI1 115 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 KNCNA6PVL3 124 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 K7EP34 96 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 LGALS1P09382 135 aaKnown RBP4.45□□□□□ -1.7
CLCN3-201ENST00000347613 COX6B1P14854 86 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 MYOZ3Q8TDC0 251 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 MRAP2Q96G30 205 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 ZNF702PQ9H963 129 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 LENEPQ9Y5L5 61 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 NOTCH3Q9UM47 2321 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 A0A0J9YX75 114 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 B4DSR2 109 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 RIPPLY3P57055 190 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 SFTA2Q6UW10 78 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 TM2D2Q9BX73 214 aa4.45□□□□□ -1.7
CLCN3-201ENST00000347613 F8VRH5 84 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms