RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 SMIM9A6NGZ8 99 aa8.43□□□□□ -1.06
CLCN6-202ENST00000346436 IGHV3-30P01768 117 aa8.43□□□□□ -1.06
CLCN6-202ENST00000346436 IGHV3-33P01772 117 aa8.43□□□□□ -1.06
CLCN6-202ENST00000346436 IGHV3-30-3P0DP02 117 aa8.43□□□□□ -1.06
CLCN6-202ENST00000346436 IGHV3-30-5P0DP03 117 aa8.43□□□□□ -1.06
CLCN6-202ENST00000346436 HERVK_113P63121 156 aa8.43□□□□□ -1.06
CLCN6-202ENST00000346436 HCFC1P51610 2035 aa8.42□□□□□ -1.06
CLCN6-202ENST00000346436 UBE2AP49459 152 aa8.42□□□□□ -1.06
CLCN6-202ENST00000346436 Q6ZQT7 251 aa8.42□□□□□ -1.06
CLCN6-202ENST00000346436 DKK2Q9UBU2 259 aa8.42□□□□□ -1.06
CLCN6-202ENST00000346436 ERG28Q9UKR5 140 aa8.42□□□□□ -1.06
CLCN6-202ENST00000346436 ETDCA0A1B0GVM5 59 aa8.42□□□□□ -1.06
CLCN6-202ENST00000346436 PRSS46E5RG02 174 aa8.42□□□□□ -1.06
CLCN6-202ENST00000346436 GATA1P15976 413 aaPredicted RBP8.42□□□□□ -1.06
CLCN6-202ENST00000346436 SDHAF1A6NFY7 115 aa8.41□□□□□ -1.06
CLCN6-202ENST00000346436 LINC01548A6NM66 108 aa8.41□□□□□ -1.06
CLCN6-202ENST00000346436 CCL25O15444 150 aa8.41□□□□□ -1.06
CLCN6-202ENST00000346436 BVES-AS1Q5T3Y7 98 aa8.41□□□□□ -1.06
CLCN6-202ENST00000346436 CHAC1Q9BUX1 264 aa8.41□□□□□ -1.06
CLCN6-202ENST00000346436 IGKV1-17P01599 117 aa8.41□□□□□ -1.06
CLCN6-202ENST00000346436 EGR2P11161 476 aaPredicted RBP8.41□□□□□ -1.06
CLCN6-202ENST00000346436 RBMY1FQ15415 496 aaKnown RBP8.41□□□□□ -1.06
CLCN6-202ENST00000346436 LINC00322Q6ZN03 302 aaPredicted RBP8.41□□□□□ -1.06
CLCN6-202ENST00000346436 TP53TG3Q9ULZ0 132 aa8.41□□□□□ -1.06
CLCN6-202ENST00000346436 SPG11Q96JI7 2443 aa8.41□□□□□ -1.06
CLCN6-202ENST00000346436 PTPN13Q12923 2485 aa8.4□□□□□ -1.06
CLCN6-202ENST00000346436 TRAV10A0A0B4J240 114 aa8.4□□□□□ -1.06
CLCN6-202ENST00000346436 IGLV2-8P01709 118 aa8.4□□□□□ -1.06
CLCN6-202ENST00000346436 Q8N9W7 124 aa8.4□□□□□ -1.06
CLCN6-202ENST00000346436 MSRB1Q9NZV6 116 aa8.4□□□□□ -1.06
CLCN6-202ENST00000346436 PFN2P35080 140 aa8.4□□□□□ -1.06
CLCN6-202ENST00000346436 GDF5OSQ5U4N7 250 aa8.4□□□□□ -1.06
CLCN6-202ENST00000346436 C7orf33Q8WU49 177 aa8.4□□□□□ -1.06
CLCN6-202ENST00000346436 IGHV3-38A0A0C4DH36 116 aa8.4□□□□□ -1.06
CLCN6-202ENST00000346436 K7EQD1 137 aa8.4□□□□□ -1.06
CLCN6-202ENST00000346436 LMO4P61968 165 aa8.4□□□□□ -1.06
CLCN6-202ENST00000346436 RBAKDNA6NC62 111 aa8.4□□□□□ -1.07
CLCN6-202ENST00000346436 DYNAPQ8N1N2 210 aa8.4□□□□□ -1.07
CLCN6-202ENST00000346436 IGKV1D-37A0A075B6S9 117 aa8.4□□□□□ -1.07
CLCN6-202ENST00000346436 I3L2K1 104 aa8.4□□□□□ -1.07
CLCN6-202ENST00000346436 K7ERJ3 54 aa8.4□□□□□ -1.07
CLCN6-202ENST00000346436 ADAMTSL5Q6ZMM2 481 aa8.4□□□□□ -1.07
CLCN6-202ENST00000346436 K7EIM0 57 aa8.39□□□□□ -1.07
CLCN6-202ENST00000346436 COX8AP10176 69 aa8.39□□□□□ -1.07
CLCN6-202ENST00000346436 NPC2P61916 151 aa8.39□□□□□ -1.07
CLCN6-202ENST00000346436 K7EMI3 77 aa8.39□□□□□ -1.07
CLCN6-202ENST00000346436 ZNF747Q9BV97 191 aa8.39□□□□□ -1.07
CLCN6-202ENST00000346436 LY6G6CO95867 125 aa8.39□□□□□ -1.07
CLCN6-202ENST00000346436 DAZ2Q13117 558 aaKnown RBP8.39□□□□□ -1.07
CLCN6-202ENST00000346436 CLPSL2Q6UWE3 100 aa8.39□□□□□ -1.07
CLCN6-202ENST00000346436 DAZ4Q86SG3 579 aaKnown RBP8.39□□□□□ -1.07
CLCN6-202ENST00000346436 DAZ3Q9NR90 486 aaKnown RBP8.39□□□□□ -1.07
CLCN6-202ENST00000346436 HHLA3Q9XRX5 114 aa8.39□□□□□ -1.07
CLCN6-202ENST00000346436 PRRC2CQ9Y520 2896 aaKnown RBP8.39□□□□□ -1.07
CLCN6-202ENST00000346436 DEFB131BA0A096LNP1 70 aa8.39□□□□□ -1.07
CLCN6-202ENST00000346436 OCIAD2Q56VL3 154 aa8.39□□□□□ -1.07
CLCN6-202ENST00000346436 PCP2Q8IVA1 136 aa8.39□□□□□ -1.07
CLCN6-202ENST00000346436 TP53TG1Q9Y2A0 90 aa8.39□□□□□ -1.07
CLCN6-202ENST00000346436 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.38□□□□□ -1.07
CLCN6-202ENST00000346436 KIR2DL5BQ8NHK3 375 aa8.38□□□□□ -1.07
CLCN6-202ENST00000346436 LYRM9A8MSI8 78 aa8.38□□□□□ -1.07
CLCN6-202ENST00000346436 XCL1P47992 114 aa8.38□□□□□ -1.07
CLCN6-202ENST00000346436 PRO0255Q9UI72 69 aa8.38□□□□□ -1.07
CLCN6-202ENST00000346436 NXPH4O95158 308 aa8.38□□□□□ -1.07
CLCN6-202ENST00000346436 TEX22C9J3V5 150 aa8.37□□□□□ -1.07
CLCN6-202ENST00000346436 ANKHD1Q8IWZ3 2542 aaKnown RBP8.37□□□□□ -1.07
CLCN6-202ENST00000346436 TTTY13Q9BZ97 58 aa8.37□□□□□ -1.07
CLCN6-202ENST00000346436 CHD9Q3L8U1 2897 aa8.37□□□□□ -1.07
CLCN6-202ENST00000346436 F6UB75 175 aa8.37□□□□□ -1.07
CLCN6-202ENST00000346436 COX7A2LO14548 114 aa8.37□□□□□ -1.07
CLCN6-202ENST00000346436 NDUFA1O15239 70 aa8.37□□□□□ -1.07
CLCN6-202ENST00000346436 GTSF1LQ9H1H1 148 aa8.37□□□□□ -1.07
CLCN6-202ENST00000346436 FSTL3O95633 263 aa8.37□□□□□ -1.07
CLCN6-202ENST00000346436 MIFP14174 115 aa8.37□□□□□ -1.07
CLCN6-202ENST00000346436 DEFB125Q8N687 156 aa8.37□□□□□ -1.07
CLCN6-202ENST00000346436 MRPL35Q9NZE8 188 aaKnown RBP8.37□□□□□ -1.07
CLCN6-202ENST00000346436 ANKRD39Q53RE8 183 aa8.36□□□□□ -1.07
CLCN6-202ENST00000346436 NUPR2A6NF83 97 aa8.36□□□□□ -1.07
CLCN6-202ENST00000346436 Q6ZSV7 163 aa8.36□□□□□ -1.07
CLCN6-202ENST00000346436 Q8N7P7 452 aa8.36□□□□□ -1.07
CLCN6-202ENST00000346436 INAFM2P0DMQ5 153 aa8.36□□□□□ -1.07
CLCN6-202ENST00000346436 C16orf54Q6UWD8 224 aa8.36□□□□□ -1.07
CLCN6-202ENST00000346436 AMTNQ6UX39 209 aa8.36□□□□□ -1.07
CLCN6-202ENST00000346436 SONP18583 2426 aaKnown RBP8.36□□□□□ -1.07
CLCN6-202ENST00000346436 EXPH5Q8NEV8 1989 aa8.36□□□□□ -1.07
CLCN6-202ENST00000346436 IGHG4P01861 327 aa8.36□□□□□ -1.07
CLCN6-202ENST00000346436 TNRC6AQ8NDV7 1962 aaKnown RBP8.36□□□□□ -1.07
CLCN6-202ENST00000346436 IGLV11-55A0A075B6I3 123 aa8.35□□□□□ -1.07
CLCN6-202ENST00000346436 TRAV8-3A0A0A6YYJ7 113 aa8.35□□□□□ -1.07
CLCN6-202ENST00000346436 P0DMU3 169 aa8.35□□□□□ -1.07
CLCN6-202ENST00000346436 FAM231AP0DMU4 169 aa8.35□□□□□ -1.07
CLCN6-202ENST00000346436 FAM231CP0DMU5 169 aa8.35□□□□□ -1.07
CLCN6-202ENST00000346436 GAGE2BQ13066 116 aa8.35□□□□□ -1.07
CLCN6-202ENST00000346436 SCRT2Q9NQ03 307 aa8.35□□□□□ -1.07
CLCN6-202ENST00000346436 NAV3Q8IVL0 2385 aa8.35□□□□□ -1.07
CLCN6-202ENST00000346436 DNAH14Q0VDD8 3507 aa8.35□□□□□ -1.07
CLCN6-202ENST00000346436 C2orf66Q6UXQ4 117 aa8.35□□□□□ -1.07
CLCN6-202ENST00000346436 RNASE8Q8TDE3 154 aaKnown RBP8.35□□□□□ -1.07
CLCN6-202ENST00000346436 PRAC2D3DTV9 90 aa8.35□□□□□ -1.07
CLCN6-202ENST00000346436 ESDP10768 282 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms